RNA–Protein interactions for RNA: ENST00000616306.1

UBXN8-208, Transcript of UBX domain protein 8, humanhuman

TSL 5

Gene UBXN8, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-208ENST00000616306 PKD1L3Q7Z443 1732 aa13.85□□□□□ -0.19
UBXN8-208ENST00000616306 TNNT2P45379 298 aaPredicted RBP13.85□□□□□ -0.19
UBXN8-208ENST00000616306 PCDH11XQ9BZA7 1347 aa13.85□□□□□ -0.19
UBXN8-208ENST00000616306 PCDH11YQ9BZA8 1340 aa13.85□□□□□ -0.19
UBXN8-208ENST00000616306 NUDT7P0C024 238 aa13.84□□□□□ -0.19
UBXN8-208ENST00000616306 MORC1Q86VD1 984 aa13.84□□□□□ -0.19
UBXN8-208ENST00000616306 ANO8Q9HCE9 1232 aaPredicted RBP13.84□□□□□ -0.19
UBXN8-208ENST00000616306 PCDHGA4Q9Y5G9 962 aa13.84□□□□□ -0.19
UBXN8-208ENST00000616306 PLEKHG2Q9H7P9 1386 aa13.83□□□□□ -0.19
UBXN8-208ENST00000616306 PDE4AP27815 886 aa13.83□□□□□ -0.2
UBXN8-208ENST00000616306 PRIM1P49642 420 aaKnown RBP13.83□□□□□ -0.2
UBXN8-208ENST00000616306 EYA1Q99502 592 aa13.83□□□□□ -0.2
UBXN8-208ENST00000616306 CASZ1Q86V15 1759 aa13.82□□□□□ -0.2
UBXN8-208ENST00000616306 SLC34A2O95436 690 aa13.82□□□□□ -0.2
UBXN8-208ENST00000616306 EIF4A2Q14240 407 aaKnown RBP13.82□□□□□ -0.2
UBXN8-208ENST00000616306 CRISPLD2Q9H0B8 497 aa13.82□□□□□ -0.2
UBXN8-208ENST00000616306 STK32BQ9NY57 414 aa13.82□□□□□ -0.2
UBXN8-208ENST00000616306 PAPPAQ13219 1627 aa13.82□□□□□ -0.2
UBXN8-208ENST00000616306 LY75O60449 1722 aa13.81□□□□□ -0.2
UBXN8-208ENST00000616306 PER1O15534 1290 aaPredicted RBP13.81□□□□□ -0.2
UBXN8-208ENST00000616306 SLC15A2Q16348 729 aa13.81□□□□□ -0.2
UBXN8-208ENST00000616306 SLC27A3Q5K4L6 730 aa13.81□□□□□ -0.2
UBXN8-208ENST00000616306 SYTL4Q96C24 671 aaPredicted RBP13.81□□□□□ -0.2
UBXN8-208ENST00000616306 SPG7Q9UQ90 795 aa13.81□□□□□ -0.2
UBXN8-208ENST00000616306 CYP27B1O15528 508 aa13.8□□□□□ -0.2
UBXN8-208ENST00000616306 PPP1R15BQ5SWA1 713 aa13.8□□□□□ -0.2
UBXN8-208ENST00000616306 SPRYD3Q8NCJ5 442 aa13.8□□□□□ -0.2
UBXN8-208ENST00000616306 SPON1Q9HCB6 807 aa13.8□□□□□ -0.2
UBXN8-208ENST00000616306 IGSF1Q8N6C5 1336 aa13.8□□□□□ -0.2
UBXN8-208ENST00000616306 ITGB4P16144 1822 aa13.79□□□□□ -0.2
UBXN8-208ENST00000616306 CFAP44Q96MT7 982 aa13.79□□□□□ -0.2
UBXN8-208ENST00000616306 LARP6Q9BRS8 491 aaKnown RBP13.79□□□□□ -0.2
UBXN8-208ENST00000616306 LRRC4BQ9NT99 713 aa13.79□□□□□ -0.2
UBXN8-208ENST00000616306 NPC1L1Q9UHC9 1359 aa13.78□□□□□ -0.2
UBXN8-208ENST00000616306 ZNF316A6NFI3 1004 aaPredicted RBP13.77□□□□□ -0.21
UBXN8-208ENST00000616306 QSER1Q2KHR3 1735 aa13.77□□□□□ -0.21
UBXN8-208ENST00000616306 PAXIP1Q6ZW49 1069 aaPredicted RBP13.77□□□□□ -0.21
UBXN8-208ENST00000616306 TOGARAM1Q9Y4F4 1720 aa13.77□□□□□ -0.21
UBXN8-208ENST00000616306 HMGB2P26583 209 aaKnown RBP13.76□□□□□ -0.21
UBXN8-208ENST00000616306 IFNL2Q8IZJ0 200 aa13.75□□□□□ -0.21
UBXN8-208ENST00000616306 DDX27Q96GQ7 796 aaKnown RBP13.75□□□□□ -0.21
UBXN8-208ENST00000616306 PDGFDQ9GZP0 370 aaPredicted RBP13.75□□□□□ -0.21
UBXN8-208ENST00000616306 PHKG2P15735 406 aa13.74□□□□□ -0.21
UBXN8-208ENST00000616306 ZNF827Q17R98 1081 aa13.74□□□□□ -0.21
UBXN8-208ENST00000616306 PTCD2Q8WV60 388 aaKnown RBP13.74□□□□□ -0.21
UBXN8-208ENST00000616306 KDRP35968 1356 aa13.73□□□□□ -0.21
UBXN8-208ENST00000616306 TBC1D12O60347 775 aa13.73□□□□□ -0.21
UBXN8-208ENST00000616306 IL13P35225 146 aa13.73□□□□□ -0.21
UBXN8-208ENST00000616306 MTHFSP49914 203 aa13.73□□□□□ -0.21
UBXN8-208ENST00000616306 AMOTQ4VCS5 1084 aa13.73□□□□□ -0.21
UBXN8-208ENST00000616306 MPRIPQ6WCQ1 1025 aa13.73□□□□□ -0.21
UBXN8-208ENST00000616306 SMARCC1Q92922 1105 aaPredicted RBP13.73□□□□□ -0.21
UBXN8-208ENST00000616306 MTFR1LQ9H019 292 aa13.73□□□□□ -0.21
UBXN8-208ENST00000616306 PPP1R1BQ9UD71 204 aaPredicted RBP13.73□□□□□ -0.21
UBXN8-208ENST00000616306 CCNL1Q9UK58 526 aaPredicted RBP13.73□□□□□ -0.21
UBXN8-208ENST00000616306 LHX6Q9UPM6 363 aa13.73□□□□□ -0.21
UBXN8-208ENST00000616306 TAF1LQ8IZX4 1826 aa13.73□□□□□ -0.21
UBXN8-208ENST00000616306 TUBGCP6Q96RT7 1819 aa13.72□□□□□ -0.21
UBXN8-208ENST00000616306 ZBTB7AO95365 584 aa13.72□□□□□ -0.21
UBXN8-208ENST00000616306 PLEKHO1Q53GL0 409 aaPredicted RBP13.72□□□□□ -0.21
UBXN8-208ENST00000616306 CC2D1BQ5T0F9 858 aaKnown RBP13.72□□□□□ -0.21
UBXN8-208ENST00000616306 KRTAP3-3Q9BYR6 98 aa13.72□□□□□ -0.21
UBXN8-208ENST00000616306 KRTAP3-2Q9BYR7 98 aa13.72□□□□□ -0.21
UBXN8-208ENST00000616306 C5P01031 1676 aa13.72□□□□□ -0.21
UBXN8-208ENST00000616306 PALLDQ8WX93 1383 aa13.71□□□□□ -0.21
UBXN8-208ENST00000616306 HSP90AB1P08238 724 aaKnown RBP13.71□□□□□ -0.21
UBXN8-208ENST00000616306 PTGER2P43116 358 aa13.71□□□□□ -0.21
UBXN8-208ENST00000616306 KCNQ4P56696 695 aa13.71□□□□□ -0.21
UBXN8-208ENST00000616306 SLC16A10Q8TF71 515 aa13.71□□□□□ -0.21
UBXN8-208ENST00000616306 PIGBQ92521 554 aa13.71□□□□□ -0.21
UBXN8-208ENST00000616306 SULT6B1Q6IMI4 303 aa13.7□□□□□ -0.22
UBXN8-208ENST00000616306 DCAF5Q96JK2 942 aa13.7□□□□□ -0.22
UBXN8-208ENST00000616306 TMOD3Q9NYL9 352 aa13.7□□□□□ -0.22
UBXN8-208ENST00000616306 TFCP2L1Q9NZI6 479 aa13.7□□□□□ -0.22
UBXN8-208ENST00000616306 ERVV-2B6SEH9 535 aa13.69□□□□□ -0.22
UBXN8-208ENST00000616306 AEBP1Q8IUX7 1158 aa13.69□□□□□ -0.22
UBXN8-208ENST00000616306 ZNF687Q8N1G0 1237 aa13.69□□□□□ -0.22
UBXN8-208ENST00000616306 COL24A1Q17RW2 1714 aa13.69□□□□□ -0.22
UBXN8-208ENST00000616306 PNPLA7Q6ZV29 1317 aa13.68□□□□□ -0.22
UBXN8-208ENST00000616306 ZNF530Q6P9A1 599 aaPredicted RBP13.68□□□□□ -0.22
UBXN8-208ENST00000616306 DIAPH1O60610 1272 aaKnown RBP13.67□□□□□ -0.22
UBXN8-208ENST00000616306 C1orf141Q5JVX7 400 aa13.67□□□□□ -0.22
UBXN8-208ENST00000616306 C4BP0C0L5 1744 aa13.67□□□□□ -0.22
UBXN8-208ENST00000616306 ZNF831Q5JPB2 1677 aa13.66□□□□□ -0.22
UBXN8-208ENST00000616306 ASAP1Q9ULH1 1129 aa13.66□□□□□ -0.22
UBXN8-208ENST00000616306 SCN11AQ9UI33 1791 aa13.66□□□□□ -0.22
UBXN8-208ENST00000616306 KDM6AO15550 1401 aaPredicted RBP13.65□□□□□ -0.22
UBXN8-208ENST00000616306 LOC102724428A0A0B4J2F2 783 aa13.65□□□□□ -0.22
UBXN8-208ENST00000616306 SIK1P57059 783 aa13.65□□□□□ -0.22
UBXN8-208ENST00000616306 MFSD10Q14728 455 aa13.65□□□□□ -0.22
UBXN8-208ENST00000616306 FLAD1Q8NFF5 587 aa13.65□□□□□ -0.22
UBXN8-208ENST00000616306 OXER1Q8TDS5 423 aa13.65□□□□□ -0.22
UBXN8-208ENST00000616306 COL3A1P02461 1466 aaPredicted RBP13.65□□□□□ -0.22
UBXN8-208ENST00000616306 UBR3Q6ZT12 1888 aa13.64□□□□□ -0.23
UBXN8-208ENST00000616306 SPNS2Q8IVW8 549 aa13.64□□□□□ -0.23
UBXN8-208ENST00000616306 ARXQ96QS3 562 aa13.64□□□□□ -0.23
UBXN8-208ENST00000616306 ATG3Q9NT62 314 aa13.64□□□□□ -0.23
UBXN8-208ENST00000616306 MAP3K5Q99683 1374 aa13.63□□□□□ -0.23
UBXN8-208ENST00000616306 VIRMAQ69YN4 1812 aaKnown RBP13.63□□□□□ -0.23
UBXN8-208ENST00000616306 HMOX1P09601 288 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms