RNA–Protein interactions for RNA: ENST00000616289.1

PDLIM2-219, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-219ENST00000616289 ARHGAP27Q6ZUM4 889 aa14.44□□□□□ -0.1
PDLIM2-219ENST00000616289 TM4SF1P30408 202 aa14.43□□□□□ -0.1
PDLIM2-219ENST00000616289 U2SURPO15042 1029 aaKnown RBP14.42□□□□□ -0.1
PDLIM2-219ENST00000616289 ZPR1O75312 459 aa14.42□□□□□ -0.1
PDLIM2-219ENST00000616289 HSPA6P17066 643 aa14.42□□□□□ -0.1
PDLIM2-219ENST00000616289 CHRNA5P30532 468 aa14.42□□□□□ -0.1
PDLIM2-219ENST00000616289 VSIG10Q8N0Z9 540 aa14.42□□□□□ -0.1
PDLIM2-219ENST00000616289 PIM2Q9P1W9 311 aa14.42□□□□□ -0.1
PDLIM2-219ENST00000616289 SCN7AQ01118 1682 aa14.42□□□□□ -0.1
PDLIM2-219ENST00000616289 DLEC1Q9Y238 1755 aa14.42□□□□□ -0.1
PDLIM2-219ENST00000616289 BCL2L12Q9HB09 334 aa14.41□□□□□ -0.1
PDLIM2-219ENST00000616289 NARFQ9UHQ1 456 aa14.41□□□□□ -0.1
PDLIM2-219ENST00000616289 NFIXQ14938 502 aa14.4□□□□□ -0.1
PDLIM2-219ENST00000616289 DALRD3Q5D0E6 543 aaKnown RBP14.4□□□□□ -0.1
PDLIM2-219ENST00000616289 CANXP27824 592 aaKnown RBP14.39□□□□□ -0.11
PDLIM2-219ENST00000616289 C9orf131Q5VYM1 1079 aa14.39□□□□□ -0.11
PDLIM2-219ENST00000616289 TTC5Q8N0Z6 440 aa14.39□□□□□ -0.11
PDLIM2-219ENST00000616289 IL17REQ8NFR9 667 aa14.39□□□□□ -0.11
PDLIM2-219ENST00000616289 GAS2L2Q8NHY3 880 aa14.39□□□□□ -0.11
PDLIM2-219ENST00000616289 CARMIL3Q8ND23 1372 aa14.38□□□□□ -0.11
PDLIM2-219ENST00000616289 HEG1Q9ULI3 1381 aa14.38□□□□□ -0.11
PDLIM2-219ENST00000616289 GNAT3A8MTJ3 354 aa14.38□□□□□ -0.11
PDLIM2-219ENST00000616289 TEFQ10587 303 aa14.38□□□□□ -0.11
PDLIM2-219ENST00000616289 ZNF496Q96IT1 587 aaPredicted RBP14.38□□□□□ -0.11
PDLIM2-219ENST00000616289 NMRK2Q9NPI5 230 aa14.38□□□□□ -0.11
PDLIM2-219ENST00000616289 SBF1O95248 1867 aa14.38□□□□□ -0.11
PDLIM2-219ENST00000616289 CEMIPQ8WUJ3 1361 aa14.37□□□□□ -0.11
PDLIM2-219ENST00000616289 ZNF790Q6PG37 636 aa14.37□□□□□ -0.11
PDLIM2-219ENST00000616289 ANKRD31Q8N7Z5 1873 aa14.36□□□□□ -0.11
PDLIM2-219ENST00000616289 TOMM70O94826 608 aa14.36□□□□□ -0.11
PDLIM2-219ENST00000616289 SERPINB2P05120 415 aa14.36□□□□□ -0.11
PDLIM2-219ENST00000616289 EIF5P55010 431 aaKnown RBP14.36□□□□□ -0.11
PDLIM2-219ENST00000616289 RSPH6AQ9H0K4 717 aa14.36□□□□□ -0.11
PDLIM2-219ENST00000616289 RNF181Q9P0P0 153 aa14.36□□□□□ -0.11
PDLIM2-219ENST00000616289 TNRC6CQ9HCJ0 1690 aaKnown RBP14.36□□□□□ -0.11
PDLIM2-219ENST00000616289 COL11A2P13942 1736 aaPredicted RBP14.35□□□□□ -0.11
PDLIM2-219ENST00000616289 BCORQ6W2J9 1755 aa14.35□□□□□ -0.11
PDLIM2-219ENST00000616289 STARD3NLO95772 234 aa14.35□□□□□ -0.11
PDLIM2-219ENST00000616289 PRKAR2BP31323 418 aa14.35□□□□□ -0.11
PDLIM2-219ENST00000616289 RASSF7Q02833 373 aa14.35□□□□□ -0.11
PDLIM2-219ENST00000616289 PHACTR3Q96KR7 559 aa14.35□□□□□ -0.11
PDLIM2-219ENST00000616289 BICDL1Q6ZP65 573 aa14.34□□□□□ -0.11
PDLIM2-219ENST00000616289 TIAM2Q8IVF5 1701 aa14.34□□□□□ -0.11
PDLIM2-219ENST00000616289 TBC1D9BQ66K14 1250 aa14.33□□□□□ -0.12
PDLIM2-219ENST00000616289 CFAP53Q96M91 514 aa14.33□□□□□ -0.12
PDLIM2-219ENST00000616289 FMNL2Q96PY5 1086 aa14.33□□□□□ -0.12
PDLIM2-219ENST00000616289 ZNF330Q9Y3S2 320 aaPredicted RBP14.33□□□□□ -0.12
PDLIM2-219ENST00000616289 WDR90Q96KV7 1748 aa14.32□□□□□ -0.12
PDLIM2-219ENST00000616289 A0A087WZG4 1122 aa14.32□□□□□ -0.12
PDLIM2-219ENST00000616289 KCNQ3O43525 872 aa14.32□□□□□ -0.12
PDLIM2-219ENST00000616289 C2CD5Q86YS7 1000 aa14.32□□□□□ -0.12
PDLIM2-219ENST00000616289 TEX13AQ9BXU3 409 aaPredicted RBP14.32□□□□□ -0.12
PDLIM2-219ENST00000616289 TBC1D2BQ9UPU7 963 aa14.32□□□□□ -0.12
PDLIM2-219ENST00000616289 BTBD11A6QL63 1104 aa14.31□□□□□ -0.12
PDLIM2-219ENST00000616289 A1BGP04217 495 aa14.31□□□□□ -0.12
PDLIM2-219ENST00000616289 PPP2R1AP30153 589 aa14.31□□□□□ -0.12
PDLIM2-219ENST00000616289 IL6STP40189 918 aaPredicted RBP14.31□□□□□ -0.12
PDLIM2-219ENST00000616289 APLP1P51693 650 aa14.31□□□□□ -0.12
PDLIM2-219ENST00000616289 PRELPP51888 382 aa14.31□□□□□ -0.12
PDLIM2-219ENST00000616289 KDM2BQ8NHM5 1336 aa14.31□□□□□ -0.12
PDLIM2-219ENST00000616289 H0YIN7 160 aa14.3□□□□□ -0.12
PDLIM2-219ENST00000616289 TTLL6Q8N841 843 aa14.3□□□□□ -0.12
PDLIM2-219ENST00000616289 PRAMEF22A3QJZ6 481 aa14.29□□□□□ -0.12
PDLIM2-219ENST00000616289 CAMTA2O94983 1202 aa14.29□□□□□ -0.12
PDLIM2-219ENST00000616289 U2AF1L5P0DN76 240 aaPredicted RBP14.29□□□□□ -0.12
PDLIM2-219ENST00000616289 U2AF1Q01081 240 aaKnown RBP eCLIP14.29□□□□□ -0.12
PDLIM2-219ENST00000616289 PRR5LQ6MZQ0 368 aa14.29□□□□□ -0.12
PDLIM2-219ENST00000616289 MCM10Q7L590 875 aa14.29□□□□□ -0.12
PDLIM2-219ENST00000616289 C16orf71Q8IYS4 520 aaPredicted RBP14.29□□□□□ -0.12
PDLIM2-219ENST00000616289 CCDC24Q8N4L8 307 aa14.29□□□□□ -0.12
PDLIM2-219ENST00000616289 RBM46Q8TBY0 533 aaKnown RBP14.29□□□□□ -0.12
PDLIM2-219ENST00000616289 NUDCQ9Y266 331 aa14.29□□□□□ -0.12
PDLIM2-219ENST00000616289 ZC3H4Q9UPT8 1303 aaKnown RBP14.29□□□□□ -0.12
PDLIM2-219ENST00000616289 CACNA1SQ13698 1873 aa14.29□□□□□ -0.12
PDLIM2-219ENST00000616289 CCDC88AQ3V6T2 1871 aa14.29□□□□□ -0.12
PDLIM2-219ENST00000616289 NFKBIEO00221 500 aa14.28□□□□□ -0.12
PDLIM2-219ENST00000616289 PIP4K2AP48426 406 aaPredicted RBP14.28□□□□□ -0.12
PDLIM2-219ENST00000616289 RRAGCQ9HB90 399 aa14.28□□□□□ -0.12
PDLIM2-219ENST00000616289 USP16Q9Y5T5 823 aa14.28□□□□□ -0.12
PDLIM2-219ENST00000616289 LAMB4A4D0S4 1761 aa14.27□□□□□ -0.12
PDLIM2-219ENST00000616289 ARFGEF2Q9Y6D5 1785 aa14.27□□□□□ -0.12
PDLIM2-219ENST00000616289 LMNB1P20700 586 aa14.27□□□□□ -0.13
PDLIM2-219ENST00000616289 DCTN1Q14203 1278 aa14.27□□□□□ -0.13
PDLIM2-219ENST00000616289 RTF1Q92541 710 aaKnown RBP14.27□□□□□ -0.13
PDLIM2-219ENST00000616289 BRIP1Q9BX63 1249 aa14.27□□□□□ -0.13
PDLIM2-219ENST00000616289 FER1L6Q2WGJ9 1857 aa14.27□□□□□ -0.13
PDLIM2-219ENST00000616289 PDE6BP35913 854 aa14.26□□□□□ -0.13
PDLIM2-219ENST00000616289 IFFO2Q5TF58 517 aa14.26□□□□□ -0.13
PDLIM2-219ENST00000616289 NPM2Q86SE8 214 aaKnown RBP14.26□□□□□ -0.13
PDLIM2-219ENST00000616289 DZIP3Q86Y13 1208 aaKnown RBP14.26□□□□□ -0.13
PDLIM2-219ENST00000616289 DNAJC5GQ8N7S2 189 aa14.26□□□□□ -0.13
PDLIM2-219ENST00000616289 CNBD1Q8NA66 436 aa14.26□□□□□ -0.13
PDLIM2-219ENST00000616289 ZNF622Q969S3 477 aaKnown RBP eCLIP14.26□□□□□ -0.13
PDLIM2-219ENST00000616289 DLG5Q8TDM6 1919 aa14.25□□□□□ -0.13
PDLIM2-219ENST00000616289 HTRA3P83110 453 aa14.25□□□□□ -0.13
PDLIM2-219ENST00000616289 FSTL1Q12841 308 aa14.25□□□□□ -0.13
PDLIM2-219ENST00000616289 SETDB2Q96T68 719 aa14.25□□□□□ -0.13
PDLIM2-219ENST00000616289 ZNF219Q9P2Y4 722 aaPredicted RBP14.25□□□□□ -0.13
PDLIM2-219ENST00000616289 PCNTO95613 3336 aa14.25□□□□□ -0.13
PDLIM2-219ENST00000616289 KDM3BQ7LBC6 1761 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms