RNA–Protein interactions for RNA: ENST00000616078.1

LINC01879-202, Transcript of long intergenic non-protein coding RNA 1879, humanhuman

Gene LINC01879, Length 1,455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01879-202ENST00000616078 COL15A1P39059 1388 aa17.47■□□□□ 0.39
LINC01879-202ENST00000616078 GNAT3A8MTJ3 354 aa17.47■□□□□ 0.39
LINC01879-202ENST00000616078 ARHGAP27Q6ZUM4 889 aa17.47■□□□□ 0.39
LINC01879-202ENST00000616078 TTC5Q8N0Z6 440 aa17.47■□□□□ 0.39
LINC01879-202ENST00000616078 STARD3NLO95772 234 aa17.45■□□□□ 0.38
LINC01879-202ENST00000616078 TEFQ10587 303 aa17.45■□□□□ 0.38
LINC01879-202ENST00000616078 CNGB1Q14028 1251 aaPredicted RBP17.45■□□□□ 0.38
LINC01879-202ENST00000616078 IL17REQ8NFR9 667 aa17.45■□□□□ 0.38
LINC01879-202ENST00000616078 CFAP53Q96M91 514 aa17.45■□□□□ 0.38
LINC01879-202ENST00000616078 KIF3CO14782 793 aa17.44■□□□□ 0.38
LINC01879-202ENST00000616078 DALRD3Q5D0E6 543 aaKnown RBP17.44■□□□□ 0.38
LINC01879-202ENST00000616078 ZNF790Q6PG37 636 aa17.44■□□□□ 0.38
LINC01879-202ENST00000616078 CEP350Q5VT06 3117 aa17.44■□□□□ 0.38
LINC01879-202ENST00000616078 NFIXQ14938 502 aa17.44■□□□□ 0.38
LINC01879-202ENST00000616078 TEX13AQ9BXU3 409 aaPredicted RBP17.44■□□□□ 0.38
LINC01879-202ENST00000616078 CEMIPQ8WUJ3 1361 aa17.43■□□□□ 0.38
LINC01879-202ENST00000616078 NRXN2Q9P2S2 1712 aa17.43■□□□□ 0.38
LINC01879-202ENST00000616078 SIPA1L3O60292 1781 aaPredicted RBP17.43■□□□□ 0.38
LINC01879-202ENST00000616078 ZNF496Q96IT1 587 aaPredicted RBP17.43■□□□□ 0.38
LINC01879-202ENST00000616078 BCL2L12Q9HB09 334 aa17.43■□□□□ 0.38
LINC01879-202ENST00000616078 HEG1Q9ULI3 1381 aa17.43■□□□□ 0.38
LINC01879-202ENST00000616078 A0A087WZG4 1122 aa17.42■□□□□ 0.38
LINC01879-202ENST00000616078 HSPA6P17066 643 aa17.42■□□□□ 0.38
LINC01879-202ENST00000616078 CANXP27824 592 aaKnown RBP17.42■□□□□ 0.38
LINC01879-202ENST00000616078 CHRNA5P30532 468 aa17.42■□□□□ 0.38
LINC01879-202ENST00000616078 EIF5P55010 431 aaKnown RBP17.42■□□□□ 0.38
LINC01879-202ENST00000616078 NUDCQ9Y266 331 aa17.42■□□□□ 0.38
LINC01879-202ENST00000616078 AFDNP55196 1824 aaKnown RBP17.42■□□□□ 0.38
LINC01879-202ENST00000616078 PRKAR2BP31323 418 aa17.41■□□□□ 0.38
LINC01879-202ENST00000616078 RSPH6AQ9H0K4 717 aa17.41■□□□□ 0.38
LINC01879-202ENST00000616078 SERPINB2P05120 415 aa17.4■□□□□ 0.38
LINC01879-202ENST00000616078 C9orf131Q5VYM1 1079 aa17.4■□□□□ 0.38
LINC01879-202ENST00000616078 PHACTR3Q96KR7 559 aa17.4■□□□□ 0.38
LINC01879-202ENST00000616078 FMNL2Q96PY5 1086 aa17.39■□□□□ 0.37
LINC01879-202ENST00000616078 PPP2R1AP30153 589 aa17.38■□□□□ 0.37
LINC01879-202ENST00000616078 IL6STP40189 918 aaPredicted RBP17.38■□□□□ 0.37
LINC01879-202ENST00000616078 TOMM70O94826 608 aa17.37■□□□□ 0.37
LINC01879-202ENST00000616078 DLEC1Q9Y238 1755 aa17.37■□□□□ 0.37
LINC01879-202ENST00000616078 BTBD11A6QL63 1104 aa17.37■□□□□ 0.37
LINC01879-202ENST00000616078 SCN7AQ01118 1682 aa17.36■□□□□ 0.37
LINC01879-202ENST00000616078 U2AF1L5P0DN76 240 aaPredicted RBP17.36■□□□□ 0.37
LINC01879-202ENST00000616078 U2AF1Q01081 240 aaKnown RBP eCLIP17.36■□□□□ 0.37
LINC01879-202ENST00000616078 SBF1O95248 1867 aa17.35■□□□□ 0.37
LINC01879-202ENST00000616078 NPM2Q86SE8 214 aaKnown RBP17.35■□□□□ 0.37
LINC01879-202ENST00000616078 NMRK2Q9NPI5 230 aa17.35■□□□□ 0.37
LINC01879-202ENST00000616078 RNF181Q9P0P0 153 aa17.35■□□□□ 0.37
LINC01879-202ENST00000616078 PDZRN3Q9UPQ7 1066 aa17.35■□□□□ 0.37
LINC01879-202ENST00000616078 TBC1D9BQ66K14 1250 aa17.34■□□□□ 0.37
LINC01879-202ENST00000616078 BICDL1Q6ZP65 573 aa17.34■□□□□ 0.37
LINC01879-202ENST00000616078 TTLL6Q8N841 843 aa17.34■□□□□ 0.37
LINC01879-202ENST00000616078 RTF1Q92541 710 aaKnown RBP17.34■□□□□ 0.37
LINC01879-202ENST00000616078 KDM2BQ8NHM5 1336 aa17.33■□□□□ 0.37
LINC01879-202ENST00000616078 ZC3H4Q9UPT8 1303 aaKnown RBP17.33■□□□□ 0.37
LINC01879-202ENST00000616078 H0YIN7 160 aa17.33■□□□□ 0.37
LINC01879-202ENST00000616078 KCNQ3O43525 872 aa17.33■□□□□ 0.37
LINC01879-202ENST00000616078 HTATSF1O43719 755 aaKnown RBP17.33■□□□□ 0.37
LINC01879-202ENST00000616078 C2CD5Q86YS7 1000 aa17.33■□□□□ 0.37
LINC01879-202ENST00000616078 TBC1D2BQ9UPU7 963 aa17.33■□□□□ 0.37
LINC01879-202ENST00000616078 ZNF330Q9Y3S2 320 aaPredicted RBP17.33■□□□□ 0.37
LINC01879-202ENST00000616078 CARMIL3Q8ND23 1372 aa17.33■□□□□ 0.36
LINC01879-202ENST00000616078 A1BGP04217 495 aa17.32■□□□□ 0.36
LINC01879-202ENST00000616078 CAMTA2O94983 1202 aa17.31■□□□□ 0.36
LINC01879-202ENST00000616078 APLP1P51693 650 aa17.31■□□□□ 0.36
LINC01879-202ENST00000616078 RBM46Q8TBY0 533 aaKnown RBP17.31■□□□□ 0.36
LINC01879-202ENST00000616078 BRIP1Q9BX63 1249 aa17.31■□□□□ 0.36
LINC01879-202ENST00000616078 SNRPA1P09661 255 aaKnown RBP17.31■□□□□ 0.36
LINC01879-202ENST00000616078 PDE6BP35913 854 aa17.31■□□□□ 0.36
LINC01879-202ENST00000616078 PRR5LQ6MZQ0 368 aa17.31■□□□□ 0.36
LINC01879-202ENST00000616078 MCM10Q7L590 875 aa17.31■□□□□ 0.36
LINC01879-202ENST00000616078 USP16Q9Y5T5 823 aa17.31■□□□□ 0.36
LINC01879-202ENST00000616078 LMNB1P20700 586 aa17.3■□□□□ 0.36
LINC01879-202ENST00000616078 SETDB2Q96T68 719 aa17.3■□□□□ 0.36
LINC01879-202ENST00000616078 ANKRD31Q8N7Z5 1873 aa17.29■□□□□ 0.36
LINC01879-202ENST00000616078 BCORQ6W2J9 1755 aa17.29■□□□□ 0.36
LINC01879-202ENST00000616078 RASSF7Q02833 373 aa17.29■□□□□ 0.36
LINC01879-202ENST00000616078 DZIP3Q86Y13 1208 aaKnown RBP17.29■□□□□ 0.36
LINC01879-202ENST00000616078 C16orf71Q8IYS4 520 aaPredicted RBP17.29■□□□□ 0.36
LINC01879-202ENST00000616078 TNRC6CQ9HCJ0 1690 aaKnown RBP17.29■□□□□ 0.36
LINC01879-202ENST00000616078 CLEC4GQ6UXB4 293 aa17.28■□□□□ 0.36
LINC01879-202ENST00000616078 RGL2O15211 777 aa17.27■□□□□ 0.36
LINC01879-202ENST00000616078 CNBD1Q8NA66 436 aa17.27■□□□□ 0.36
LINC01879-202ENST00000616078 PRAMEF22A3QJZ6 481 aa17.26■□□□□ 0.35
LINC01879-202ENST00000616078 NEFMP07197 916 aa17.26■□□□□ 0.35
LINC01879-202ENST00000616078 ST5P78524 1137 aa17.26■□□□□ 0.35
LINC01879-202ENST00000616078 FSTL1Q12841 308 aa17.26■□□□□ 0.35
LINC01879-202ENST00000616078 DCTN1Q14203 1278 aa17.26■□□□□ 0.35
LINC01879-202ENST00000616078 TAF7Q15545 349 aaPredicted RBP17.26■□□□□ 0.35
LINC01879-202ENST00000616078 ZNF622Q969S3 477 aaKnown RBP eCLIP17.26■□□□□ 0.35
LINC01879-202ENST00000616078 ZNF652Q9Y2D9 606 aa17.26■□□□□ 0.35
LINC01879-202ENST00000616078 NFKBIEO00221 500 aa17.25■□□□□ 0.35
LINC01879-202ENST00000616078 PRELPP51888 382 aa17.25■□□□□ 0.35
LINC01879-202ENST00000616078 RRAGCQ9HB90 399 aa17.25■□□□□ 0.35
LINC01879-202ENST00000616078 COL11A2P13942 1736 aaPredicted RBP17.25■□□□□ 0.35
LINC01879-202ENST00000616078 GLTPD2A6NH11 291 aa17.24■□□□□ 0.35
LINC01879-202ENST00000616078 NPHP1O15259 732 aa17.24■□□□□ 0.35
LINC01879-202ENST00000616078 PIP4K2AP48426 406 aaPredicted RBP17.24■□□□□ 0.35
LINC01879-202ENST00000616078 STYK1Q6J9G0 422 aa17.24■□□□□ 0.35
LINC01879-202ENST00000616078 CCDC24Q8N4L8 307 aa17.24■□□□□ 0.35
LINC01879-202ENST00000616078 PNISRQ8TF01 805 aaKnown RBP17.24■□□□□ 0.35
LINC01879-202ENST00000616078 CNKSR1Q969H4 720 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms