RNA–Protein interactions for RNA: ENST00000615940.4

LRTOMT-222, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, human

TSL 5 BASIC

Gene LRTOMT, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRTOMT-222	ENST00000615940	CALR3	Q96L12	384 aa	Known RBP	11.78	□□□□□ -0.52
LRTOMT-222	ENST00000615940	PHF8	Q9UPP1	1060 aa		11.78	□□□□□ -0.52
LRTOMT-222	ENST00000615940	ECM2	O94769	699 aa	Predicted RBP	11.77	□□□□□ -0.53
LRTOMT-222	ENST00000615940	BDNF	P23560	247 aa		11.77	□□□□□ -0.53
LRTOMT-222	ENST00000615940	CHMP4C	Q96CF2	233 aa		11.77	□□□□□ -0.53
LRTOMT-222	ENST00000615940	CABP1	Q9NZU7	370 aa		11.77	□□□□□ -0.53
LRTOMT-222	ENST00000615940	CCDC61	Q9Y6R9	512 aa		11.77	□□□□□ -0.53
LRTOMT-222	ENST00000615940	COL16A1	Q07092	1604 aa	Predicted RBP	11.76	□□□□□ -0.53
LRTOMT-222	ENST00000615940	PEX19	P40855	299 aa		11.76	□□□□□ -0.53
LRTOMT-222	ENST00000615940	PMM1	Q92871	262 aa		11.76	□□□□□ -0.53
LRTOMT-222	ENST00000615940	SPOCK3	Q9BQ16	436 aa		11.76	□□□□□ -0.53
LRTOMT-222	ENST00000615940	MON2	Q7Z3U7	1717 aa		11.76	□□□□□ -0.53
LRTOMT-222	ENST00000615940	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.76	□□□□□ -0.53
LRTOMT-222	ENST00000615940	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.76	□□□□□ -0.53
LRTOMT-222	ENST00000615940	SMAP	O00193	183 aa		11.76	□□□□□ -0.53
LRTOMT-222	ENST00000615940	KIF1C	O43896	1103 aa	Known RBP	11.76	□□□□□ -0.53
LRTOMT-222	ENST00000615940	PAK3	O75914	559 aa	Predicted RBP	11.76	□□□□□ -0.53
LRTOMT-222	ENST00000615940	ZNF853	P0CG23	659 aa		11.76	□□□□□ -0.53
LRTOMT-222	ENST00000615940	NEFH	P12036	1026 aa		11.76	□□□□□ -0.53
LRTOMT-222	ENST00000615940	SF3B2	Q13435	895 aa	Known RBP	11.76	□□□□□ -0.53
LRTOMT-222	ENST00000615940	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.76	□□□□□ -0.53
LRTOMT-222	ENST00000615940	TMC1	Q8TDI8	760 aa		11.76	□□□□□ -0.53
LRTOMT-222	ENST00000615940	RANBP17	Q9H2T7	1088 aa	Known RBP	11.76	□□□□□ -0.53
LRTOMT-222	ENST00000615940	SLC12A5	Q9H2X9	1139 aa		11.76	□□□□□ -0.53
LRTOMT-222	ENST00000615940	ACE	P12821	1306 aa		11.75	□□□□□ -0.53
LRTOMT-222	ENST00000615940	KIF16B	Q96L93	1317 aa		11.75	□□□□□ -0.53
LRTOMT-222	ENST00000615940	CTAGE5	O15320	804 aa		11.75	□□□□□ -0.53
LRTOMT-222	ENST00000615940	EIF3J	O75822	258 aa	Known RBP	11.75	□□□□□ -0.53
LRTOMT-222	ENST00000615940	HSPA1L	P34931	641 aa		11.75	□□□□□ -0.53
LRTOMT-222	ENST00000615940	TERF1	P54274	439 aa		11.75	□□□□□ -0.53
LRTOMT-222	ENST00000615940	KLHL42	Q9P2K6	505 aa		11.75	□□□□□ -0.53
LRTOMT-222	ENST00000615940	ATAD2	Q6PL18	1390 aa		11.75	□□□□□ -0.53
LRTOMT-222	ENST00000615940	LSM14A	Q8ND56	463 aa	Known RBP	11.74	□□□□□ -0.53
LRTOMT-222	ENST00000615940	NGDN	Q8NEJ9	315 aa	Known RBP	11.74	□□□□□ -0.53
LRTOMT-222	ENST00000615940	SREK1	Q8WXA9	508 aa	Known RBP	11.74	□□□□□ -0.53
LRTOMT-222	ENST00000615940	KIF7	Q2M1P5	1343 aa		11.74	□□□□□ -0.53
LRTOMT-222	ENST00000615940	PXDN	Q92626	1479 aa		11.74	□□□□□ -0.53
LRTOMT-222	ENST00000615940	CD163L1	Q9NR16	1453 aa		11.74	□□□□□ -0.53
LRTOMT-222	ENST00000615940	GYS2	P54840	703 aa		11.74	□□□□□ -0.53
LRTOMT-222	ENST00000615940	HSP90AB2P	Q58FF8	381 aa		11.74	□□□□□ -0.53
LRTOMT-222	ENST00000615940	GIMAP6	Q6P9H5	292 aa		11.74	□□□□□ -0.53
LRTOMT-222	ENST00000615940	NCAPG	Q9BPX3	1015 aa		11.74	□□□□□ -0.53
LRTOMT-222	ENST00000615940	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.74	□□□□□ -0.53
LRTOMT-222	ENST00000615940	CCDC194	A0A1B0GVG4	234 aa		11.73	□□□□□ -0.53
LRTOMT-222	ENST00000615940	ILDR1	Q86SU0	546 aa	Predicted RBP	11.73	□□□□□ -0.53
LRTOMT-222	ENST00000615940	PIK3R5	Q8WYR1	880 aa		11.73	□□□□□ -0.53
LRTOMT-222	ENST00000615940	GNL3L	Q9NVN8	582 aa	Known RBP	11.73	□□□□□ -0.53
LRTOMT-222	ENST00000615940	ALS2	Q96Q42	1657 aa		11.72	□□□□□ -0.53
LRTOMT-222	ENST00000615940	PLEKHG3	A1L390	1219 aa		11.72	□□□□□ -0.53
LRTOMT-222	ENST00000615940	KLHL33	A6NCF5	533 aa		11.72	□□□□□ -0.53
LRTOMT-222	ENST00000615940	SMC4	Q9NTJ3	1288 aa		11.72	□□□□□ -0.53
LRTOMT-222	ENST00000615940	NRK	Q7Z2Y5	1582 aa		11.72	□□□□□ -0.53
LRTOMT-222	ENST00000615940	NPHP3	Q7Z494	1330 aa		11.72	□□□□□ -0.53
LRTOMT-222	ENST00000615940	PPP1R12A	O14974	1030 aa	Predicted RBP	11.72	□□□□□ -0.53
LRTOMT-222	ENST00000615940	IPO7	O95373	1038 aa	Known RBP	11.72	□□□□□ -0.53
LRTOMT-222	ENST00000615940	PSMC1	P62191	440 aa	Known RBP	11.72	□□□□□ -0.53
LRTOMT-222	ENST00000615940	PSME1	Q06323	249 aa		11.72	□□□□□ -0.53
LRTOMT-222	ENST00000615940	KRT28	Q7Z3Y7	464 aa		11.72	□□□□□ -0.53
LRTOMT-222	ENST00000615940	ACRBP	Q8NEB7	543 aa		11.72	□□□□□ -0.53
LRTOMT-222	ENST00000615940	IPO9	Q96P70	1041 aa	Known RBP	11.72	□□□□□ -0.53
LRTOMT-222	ENST00000615940	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.72	□□□□□ -0.53
LRTOMT-222	ENST00000615940	POLR3A	O14802	1390 aa	Predicted RBP	11.72	□□□□□ -0.53
LRTOMT-222	ENST00000615940	CCDC184	Q52MB2	194 aa		11.71	□□□□□ -0.53
LRTOMT-222	ENST00000615940	CLUAP1	Q96AJ1	413 aa		11.71	□□□□□ -0.53
LRTOMT-222	ENST00000615940	PDZRN3	Q9UPQ7	1066 aa		11.71	□□□□□ -0.53
LRTOMT-222	ENST00000615940	CCDC7	Q96M83	1385 aa		11.71	□□□□□ -0.53
LRTOMT-222	ENST00000615940	SOS2	Q07890	1332 aa	Predicted RBP	11.71	□□□□□ -0.54
LRTOMT-222	ENST00000615940		A0A1W2PP64	1363 aa		11.7	□□□□□ -0.54
LRTOMT-222	ENST00000615940	WDHD1	O75717	1129 aa	Predicted RBP	11.7	□□□□□ -0.54
LRTOMT-222	ENST00000615940	PAX7	P23759	505 aa		11.7	□□□□□ -0.54
LRTOMT-222	ENST00000615940	DONSON	Q9NYP3	566 aa		11.7	□□□□□ -0.54
LRTOMT-222	ENST00000615940	MARF1	Q9Y4F3	1742 aa	Known RBP	11.7	□□□□□ -0.54
LRTOMT-222	ENST00000615940	CPSF1	Q10570	1443 aa	Known RBP	11.7	□□□□□ -0.54
LRTOMT-222	ENST00000615940	KIF20B	Q96Q89	1820 aa		11.7	□□□□□ -0.54
LRTOMT-222	ENST00000615940	CFAP69	A5D8W1	941 aa		11.7	□□□□□ -0.54
LRTOMT-222	ENST00000615940	KIF3C	O14782	793 aa		11.7	□□□□□ -0.54
LRTOMT-222	ENST00000615940	PPP4C	P60510	307 aa		11.7	□□□□□ -0.54
LRTOMT-222	ENST00000615940	ARPC5L	Q9BPX5	153 aa		11.7	□□□□□ -0.54
LRTOMT-222	ENST00000615940	CWC25	Q9NXE8	425 aa	Predicted RBP	11.7	□□□□□ -0.54
LRTOMT-222	ENST00000615940	NRBP1	Q9UHY1	535 aa		11.7	□□□□□ -0.54
LRTOMT-222	ENST00000615940	USP6	P35125	1406 aa		11.69	□□□□□ -0.54
LRTOMT-222	ENST00000615940	PIK3C2A	O00443	1686 aa		11.69	□□□□□ -0.54
LRTOMT-222	ENST00000615940	SHPRH	Q149N8	1683 aa		11.69	□□□□□ -0.54
LRTOMT-222	ENST00000615940	KTN1	Q86UP2	1357 aa	Known RBP	11.69	□□□□□ -0.54
LRTOMT-222	ENST00000615940	U2SURP	O15042	1029 aa	Known RBP	11.69	□□□□□ -0.54
LRTOMT-222	ENST00000615940	TSR1	Q2NL82	804 aa	Known RBP	11.69	□□□□□ -0.54
LRTOMT-222	ENST00000615940	ICE2	Q659A1	982 aa		11.69	□□□□□ -0.54
LRTOMT-222	ENST00000615940	FBXO9	Q9UK97	447 aa	Predicted RBP	11.69	□□□□□ -0.54
LRTOMT-222	ENST00000615940	ABCA3	Q99758	1704 aa		11.69	□□□□□ -0.54
LRTOMT-222	ENST00000615940	CBFA2T2	O43439	604 aa		11.68	□□□□□ -0.54
LRTOMT-222	ENST00000615940	PARN	O95453	639 aa	Known RBP	11.68	□□□□□ -0.54
LRTOMT-222	ENST00000615940	TCF3	P15923	654 aa		11.68	□□□□□ -0.54
LRTOMT-222	ENST00000615940	CCT2	P78371	535 aa	Known RBP	11.68	□□□□□ -0.54
LRTOMT-222	ENST00000615940	C4orf46	Q504U0	113 aa		11.68	□□□□□ -0.54
LRTOMT-222	ENST00000615940	MIER1	Q8N108	512 aa		11.68	□□□□□ -0.54
LRTOMT-222	ENST00000615940	MNS1	Q8NEH6	495 aa		11.68	□□□□□ -0.54
LRTOMT-222	ENST00000615940	VTI1A	Q96AJ9	217 aa		11.68	□□□□□ -0.54
LRTOMT-222	ENST00000615940	LARP6	Q9BRS8	491 aa	Known RBP	11.68	□□□□□ -0.54
LRTOMT-222	ENST00000615940	PUF60	Q9UHX1	559 aa	Known RBP	11.68	□□□□□ -0.54
LRTOMT-222	ENST00000615940	PES1	O00541	588 aa	Known RBP	11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms