RNA–Protein interactions for RNA: ENST00000615838.1

SDCBP2-206, Transcript of syndecan binding protein 2, humanhuman

TSL 2

Gene SDCBP2, Length 1,096 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-206ENST00000615838 ZPR1O75312 459 aa22.39■■□□□ 1.17
SDCBP2-206ENST00000615838 HEG1Q9ULI3 1381 aa22.38■■□□□ 1.17
SDCBP2-206ENST00000615838 CANXP27824 592 aaKnown RBP22.38■■□□□ 1.17
SDCBP2-206ENST00000615838 DDR1Q08345 913 aa22.38■■□□□ 1.17
SDCBP2-206ENST00000615838 USPL1Q5W0Q7 1092 aa22.38■■□□□ 1.17
SDCBP2-206ENST00000615838 MCM10Q7L590 875 aa22.38■■□□□ 1.17
SDCBP2-206ENST00000615838 A0A0G2JLW4 131 aa22.37■■□□□ 1.17
SDCBP2-206ENST00000615838 BTBD11A6QL63 1104 aa22.37■■□□□ 1.17
SDCBP2-206ENST00000615838 KCNQ3O43525 872 aa22.37■■□□□ 1.17
SDCBP2-206ENST00000615838 RTF1Q92541 710 aaKnown RBP22.37■■□□□ 1.17
SDCBP2-206ENST00000615838 STARD3NLO95772 234 aa22.36■■□□□ 1.17
SDCBP2-206ENST00000615838 DCTN1Q14203 1278 aa22.36■■□□□ 1.17
SDCBP2-206ENST00000615838 TGFB2P61812 414 aa22.35■■□□□ 1.17
SDCBP2-206ENST00000615838 DDX10Q13206 875 aaKnown RBP22.35■■□□□ 1.17
SDCBP2-206ENST00000615838 FMNL2Q96PY5 1086 aa22.35■■□□□ 1.17
SDCBP2-206ENST00000615838 NARFQ9UHQ1 456 aa22.35■■□□□ 1.17
SDCBP2-206ENST00000615838 ARFGEF1Q9Y6D6 1849 aa22.35■■□□□ 1.17
SDCBP2-206ENST00000615838 DPEP1P16444 411 aa22.34■■□□□ 1.17
SDCBP2-206ENST00000615838 POLRMTO00411 1230 aaKnown RBP22.33■■□□□ 1.17
SDCBP2-206ENST00000615838 TM4SF1P30408 202 aa22.33■■□□□ 1.17
SDCBP2-206ENST00000615838 NRXN2Q9P2S2 1712 aa22.33■■□□□ 1.17
SDCBP2-206ENST00000615838 SCN7AQ01118 1682 aa22.33■■□□□ 1.16
SDCBP2-206ENST00000615838 EIF5P55010 431 aaKnown RBP22.32■■□□□ 1.16
SDCBP2-206ENST00000615838 TEX13AQ9BXU3 409 aaPredicted RBP22.32■■□□□ 1.16
SDCBP2-206ENST00000615838 BCL2L12Q9HB09 334 aa22.32■■□□□ 1.16
SDCBP2-206ENST00000615838 HTATSF1O43719 755 aaKnown RBP22.31■■□□□ 1.16
SDCBP2-206ENST00000615838 NFIXQ14938 502 aa22.31■■□□□ 1.16
SDCBP2-206ENST00000615838 ZNF330Q9Y3S2 320 aaPredicted RBP22.31■■□□□ 1.16
SDCBP2-206ENST00000615838 A1BGP04217 495 aa22.3■■□□□ 1.16
SDCBP2-206ENST00000615838 NEFMP07197 916 aa22.3■■□□□ 1.16
SDCBP2-206ENST00000615838 RALBP1Q15311 655 aa22.3■■□□□ 1.16
SDCBP2-206ENST00000615838 PLEKHF1Q96S99 279 aa22.3■■□□□ 1.16
SDCBP2-206ENST00000615838 BCS1LQ9Y276 419 aa22.3■■□□□ 1.16
SDCBP2-206ENST00000615838 BCORQ6W2J9 1755 aa22.29■■□□□ 1.16
SDCBP2-206ENST00000615838 KDM3BQ7LBC6 1761 aa22.29■■□□□ 1.16
SDCBP2-206ENST00000615838 A0A087WZG4 1122 aa22.28■■□□□ 1.16
SDCBP2-206ENST00000615838 PRAMEF22A3QJZ6 481 aa22.28■■□□□ 1.16
SDCBP2-206ENST00000615838 KCNA3P22001 575 aa22.28■■□□□ 1.16
SDCBP2-206ENST00000615838 ATP10DQ9P241 1426 aa22.28■■□□□ 1.16
SDCBP2-206ENST00000615838 USP16Q9Y5T5 823 aa22.27■■□□□ 1.16
SDCBP2-206ENST00000615838 LAMB4A4D0S4 1761 aa22.27■■□□□ 1.16
SDCBP2-206ENST00000615838 DLEC1Q9Y238 1755 aa22.27■■□□□ 1.16
SDCBP2-206ENST00000615838 ANKRD31Q8N7Z5 1873 aa22.26■■□□□ 1.15
SDCBP2-206ENST00000615838 IL6STP40189 918 aaPredicted RBP22.26■■□□□ 1.15
SDCBP2-206ENST00000615838 TAF7Q15545 349 aaPredicted RBP22.26■■□□□ 1.15
SDCBP2-206ENST00000615838 NFE2L2Q16236 605 aa22.26■■□□□ 1.15
SDCBP2-206ENST00000615838 MIS18AQ9NYP9 233 aa22.26■■□□□ 1.15
SDCBP2-206ENST00000615838 TBC1D2BQ9UPU7 963 aa22.26■■□□□ 1.15
SDCBP2-206ENST00000615838 ADCY9O60503 1353 aa22.25■■□□□ 1.15
SDCBP2-206ENST00000615838 CHRNA5P30532 468 aa22.25■■□□□ 1.15
SDCBP2-206ENST00000615838 PIP4K2AP48426 406 aaPredicted RBP22.25■■□□□ 1.15
SDCBP2-206ENST00000615838 BICDL1Q6ZP65 573 aa22.25■■□□□ 1.15
SDCBP2-206ENST00000615838 MAPK8IP3Q9UPT6 1336 aa22.25■■□□□ 1.15
SDCBP2-206ENST00000615838 SERPINB2P05120 415 aa22.24■■□□□ 1.15
SDCBP2-206ENST00000615838 SNRPA1P09661 255 aaKnown RBP22.24■■□□□ 1.15
SDCBP2-206ENST00000615838 PIM2Q9P1W9 311 aa22.24■■□□□ 1.15
SDCBP2-206ENST00000615838 SBF1O95248 1867 aa22.24■■□□□ 1.15
SDCBP2-206ENST00000615838 TBC1D9BQ66K14 1250 aa22.23■■□□□ 1.15
SDCBP2-206ENST00000615838 THUMPD2Q9BTF0 503 aaKnown RBP22.23■■□□□ 1.15
SDCBP2-206ENST00000615838 PNNQ9H307 717 aaKnown RBP22.23■■□□□ 1.15
SDCBP2-206ENST00000615838 MYBBP1AQ9BQG0 1328 aaKnown RBP22.23■■□□□ 1.15
SDCBP2-206ENST00000615838 ARHGAP27Q6ZUM4 889 aa22.22■■□□□ 1.15
SDCBP2-206ENST00000615838 GIGYF1O75420 1035 aaPredicted RBP22.21■■□□□ 1.15
SDCBP2-206ENST00000615838 DALRD3Q5D0E6 543 aaKnown RBP22.21■■□□□ 1.15
SDCBP2-206ENST00000615838 NPM2Q86SE8 214 aaKnown RBP22.21■■□□□ 1.15
SDCBP2-206ENST00000615838 ZNF526Q8TF50 670 aaPredicted RBP22.21■■□□□ 1.15
SDCBP2-206ENST00000615838 CARMIL3Q8ND23 1372 aa22.21■■□□□ 1.15
SDCBP2-206ENST00000615838 CCDC88AQ3V6T2 1871 aa22.2■■□□□ 1.14
SDCBP2-206ENST00000615838 CAMTA2O94983 1202 aa22.2■■□□□ 1.14
SDCBP2-206ENST00000615838 CACNA1SQ13698 1873 aa22.2■■□□□ 1.14
SDCBP2-206ENST00000615838 C1QTNF8P60827 252 aa22.19■■□□□ 1.14
SDCBP2-206ENST00000615838 DZIP3Q86Y13 1208 aaKnown RBP22.19■■□□□ 1.14
SDCBP2-206ENST00000615838 COL11A2P13942 1736 aaPredicted RBP22.18■■□□□ 1.14
SDCBP2-206ENST00000615838 NBPF26B4DH59 902 aa22.18■■□□□ 1.14
SDCBP2-206ENST00000615838 NBPF10Q6P3W6 841 aaKnown RBP22.18■■□□□ 1.14
SDCBP2-206ENST00000615838 NBPF15Q8N660 670 aa22.18■■□□□ 1.14
SDCBP2-206ENST00000615838 PNISRQ8TF01 805 aaKnown RBP22.17■■□□□ 1.14
SDCBP2-206ENST00000615838 GPBP1L1Q9HC44 474 aaPredicted RBP22.17■■□□□ 1.14
SDCBP2-206ENST00000615838 NUP98P52948 1817 aa22.16■■□□□ 1.14
SDCBP2-206ENST00000615838 CCDC24Q8N4L8 307 aa22.16■■□□□ 1.14
SDCBP2-206ENST00000615838 RIPK4P57078 832 aa22.15■■□□□ 1.14
SDCBP2-206ENST00000615838 C2CD5Q86YS7 1000 aa22.15■■□□□ 1.14
SDCBP2-206ENST00000615838 SETDB2Q96T68 719 aa22.15■■□□□ 1.14
SDCBP2-206ENST00000615838 EIF4A1P60842 406 aaKnown RBP22.14■■□□□ 1.13
SDCBP2-206ENST00000615838 PRR5LQ6MZQ0 368 aa22.14■■□□□ 1.13
SDCBP2-206ENST00000615838 CCDC146Q8IYE0 955 aa22.14■■□□□ 1.13
SDCBP2-206ENST00000615838 TMPOP42166 694 aaKnown RBP22.13■■□□□ 1.13
SDCBP2-206ENST00000615838 H0YIN7 160 aa22.12■■□□□ 1.13
SDCBP2-206ENST00000615838 RRP7AQ9Y3A4 280 aaKnown RBP22.12■■□□□ 1.13
SDCBP2-206ENST00000615838 C9orf131Q5VYM1 1079 aa22.11■■□□□ 1.13
SDCBP2-206ENST00000615838 CNBD1Q8NA66 436 aa22.11■■□□□ 1.13
SDCBP2-206ENST00000615838 PRKRIP1Q9H875 184 aaPredicted RBP22.11■■□□□ 1.13
SDCBP2-206ENST00000615838 NPHP1O15259 732 aa22.1■■□□□ 1.13
SDCBP2-206ENST00000615838 WDR43Q15061 677 aaKnown RBP eCLIP22.1■■□□□ 1.13
SDCBP2-206ENST00000615838 CLEC4GQ6UXB4 293 aa22.1■■□□□ 1.13
SDCBP2-206ENST00000615838 TTLL6Q8N841 843 aa22.1■■□□□ 1.13
SDCBP2-206ENST00000615838 BRIP1Q9BX63 1249 aa22.1■■□□□ 1.13
SDCBP2-206ENST00000615838 TSPYL4Q9UJ04 414 aa22.1■■□□□ 1.13
SDCBP2-206ENST00000615838 ZNF652Q9Y2D9 606 aa22.1■■□□□ 1.13
SDCBP2-206ENST00000615838 SLX4Q8IY92 1834 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms