RNA–Protein interactions for RNA: ENST00000615137.1

LINC00598-205, long intergenic non-protein coding RNA 598, humanhuman

TSL 3

Gene LINC00598, Length 483 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-205ENST00000615137 DPEP1P16444 411 aa17.37■□□□□ 0.37
LINC00598-205ENST00000615137 CANXP27824 592 aaKnown RBP17.37■□□□□ 0.37
LINC00598-205ENST00000615137 VSIG10Q8N0Z9 540 aa17.37■□□□□ 0.37
LINC00598-205ENST00000615137 ZNF496Q96IT1 587 aaPredicted RBP17.37■□□□□ 0.37
LINC00598-205ENST00000615137 TGFB2P61812 414 aa17.36■□□□□ 0.37
LINC00598-205ENST00000615137 ZNF790Q6PG37 636 aa17.36■□□□□ 0.37
LINC00598-205ENST00000615137 CEMIPQ8WUJ3 1361 aa17.36■□□□□ 0.37
LINC00598-205ENST00000615137 MCM10Q7L590 875 aa17.35■□□□□ 0.37
LINC00598-205ENST00000615137 BCS1LQ9Y276 419 aa17.35■□□□□ 0.37
LINC00598-205ENST00000615137 HEG1Q9ULI3 1381 aa17.35■□□□□ 0.37
LINC00598-205ENST00000615137 ATP10DQ9P241 1426 aa17.35■□□□□ 0.37
LINC00598-205ENST00000615137 BTBD11A6QL63 1104 aa17.34■□□□□ 0.37
LINC00598-205ENST00000615137 POLRMTO00411 1230 aaKnown RBP17.34■□□□□ 0.37
LINC00598-205ENST00000615137 FCHSD2O94868 740 aa17.34■□□□□ 0.37
LINC00598-205ENST00000615137 TM4SF1P30408 202 aa17.34■□□□□ 0.37
LINC00598-205ENST00000615137 DCTN1Q14203 1278 aa17.34■□□□□ 0.37
LINC00598-205ENST00000615137 BCL2L12Q9HB09 334 aa17.34■□□□□ 0.37
LINC00598-205ENST00000615137 NARFQ9UHQ1 456 aa17.34■□□□□ 0.37
LINC00598-205ENST00000615137 ARFGEF1Q9Y6D6 1849 aa17.34■□□□□ 0.37
LINC00598-205ENST00000615137 ZNF330Q9Y3S2 320 aaPredicted RBP17.33■□□□□ 0.36
LINC00598-205ENST00000615137 GIGYF1O75420 1035 aaPredicted RBP17.32■□□□□ 0.36
LINC00598-205ENST00000615137 STARD3NLO95772 234 aa17.32■□□□□ 0.36
LINC00598-205ENST00000615137 NFIXQ14938 502 aa17.32■□□□□ 0.36
LINC00598-205ENST00000615137 ZNF526Q8TF50 670 aaPredicted RBP17.32■□□□□ 0.36
LINC00598-205ENST00000615137 RTF1Q92541 710 aaKnown RBP17.32■□□□□ 0.36
LINC00598-205ENST00000615137 FMNL2Q96PY5 1086 aa17.32■□□□□ 0.36
LINC00598-205ENST00000615137 NRXN2Q9P2S2 1712 aa17.32■□□□□ 0.36
LINC00598-205ENST00000615137 ADCY9O60503 1353 aa17.31■□□□□ 0.36
LINC00598-205ENST00000615137 KCNA3P22001 575 aa17.31■□□□□ 0.36
LINC00598-205ENST00000615137 CHRNA5P30532 468 aa17.31■□□□□ 0.36
LINC00598-205ENST00000615137 SCN7AQ01118 1682 aa17.31■□□□□ 0.36
LINC00598-205ENST00000615137 PRAMEF22A3QJZ6 481 aa17.3■□□□□ 0.36
LINC00598-205ENST00000615137 A1BGP04217 495 aa17.3■□□□□ 0.36
LINC00598-205ENST00000615137 EIF5P55010 431 aaKnown RBP17.3■□□□□ 0.36
LINC00598-205ENST00000615137 C1QTNF8P60827 252 aa17.3■□□□□ 0.36
LINC00598-205ENST00000615137 BICDL1Q6ZP65 573 aa17.3■□□□□ 0.36
LINC00598-205ENST00000615137 PIP4K2AP48426 406 aaPredicted RBP17.29■□□□□ 0.36
LINC00598-205ENST00000615137 ARHGAP27Q6ZUM4 889 aa17.29■□□□□ 0.36
LINC00598-205ENST00000615137 TEX13AQ9BXU3 409 aaPredicted RBP17.29■□□□□ 0.36
LINC00598-205ENST00000615137 BCORQ6W2J9 1755 aa17.28■□□□□ 0.36
LINC00598-205ENST00000615137 TBC1D2BQ9UPU7 963 aa17.28■□□□□ 0.36
LINC00598-205ENST00000615137 USP16Q9Y5T5 823 aa17.28■□□□□ 0.36
LINC00598-205ENST00000615137 DLEC1Q9Y238 1755 aa17.28■□□□□ 0.36
LINC00598-205ENST00000615137 ANKRD31Q8N7Z5 1873 aa17.27■□□□□ 0.36
LINC00598-205ENST00000615137 A0A087WZG4 1122 aa17.27■□□□□ 0.36
LINC00598-205ENST00000615137 SERPINB2P05120 415 aa17.27■□□□□ 0.36
LINC00598-205ENST00000615137 GPBP1L1Q9HC44 474 aaPredicted RBP17.27■□□□□ 0.36
LINC00598-205ENST00000615137 PIM2Q9P1W9 311 aa17.27■□□□□ 0.36
LINC00598-205ENST00000615137 DDX10Q13206 875 aaKnown RBP17.26■□□□□ 0.35
LINC00598-205ENST00000615137 TBC1D9BQ66K14 1250 aa17.26■□□□□ 0.35
LINC00598-205ENST00000615137 MIS18AQ9NYP9 233 aa17.26■□□□□ 0.35
LINC00598-205ENST00000615137 SBF1O95248 1867 aa17.26■□□□□ 0.35
LINC00598-205ENST00000615137 CARMIL3Q8ND23 1372 aa17.26■□□□□ 0.35
LINC00598-205ENST00000615137 KDM3BQ7LBC6 1761 aa17.25■□□□□ 0.35
LINC00598-205ENST00000615137 SENP3-EIF4A1A0A087X0R7 540 aa17.25■□□□□ 0.35
LINC00598-205ENST00000615137 HTATSF1O43719 755 aaKnown RBP17.25■□□□□ 0.35
LINC00598-205ENST00000615137 IL6STP40189 918 aaPredicted RBP17.25■□□□□ 0.35
LINC00598-205ENST00000615137 DALRD3Q5D0E6 543 aaKnown RBP17.25■□□□□ 0.35
LINC00598-205ENST00000615137 PLEKHF1Q96S99 279 aa17.25■□□□□ 0.35
LINC00598-205ENST00000615137 NEFMP07197 916 aa17.24■□□□□ 0.35
LINC00598-205ENST00000615137 LAMB4A4D0S4 1761 aa17.24■□□□□ 0.35
LINC00598-205ENST00000615137 CACNA1SQ13698 1873 aa17.24■□□□□ 0.35
LINC00598-205ENST00000615137 CCDC88AQ3V6T2 1871 aa17.23■□□□□ 0.35
LINC00598-205ENST00000615137 SNRPA1P09661 255 aaKnown RBP17.23■□□□□ 0.35
LINC00598-205ENST00000615137 TAF7Q15545 349 aaPredicted RBP17.23■□□□□ 0.35
LINC00598-205ENST00000615137 CCDC24Q8N4L8 307 aa17.23■□□□□ 0.35
LINC00598-205ENST00000615137 THUMPD2Q9BTF0 503 aaKnown RBP17.23■□□□□ 0.35
LINC00598-205ENST00000615137 COL11A2P13942 1736 aaPredicted RBP17.22■□□□□ 0.35
LINC00598-205ENST00000615137 CAMTA2O94983 1202 aa17.22■□□□□ 0.35
LINC00598-205ENST00000615137 NFE2L2Q16236 605 aa17.22■□□□□ 0.35
LINC00598-205ENST00000615137 NPM2Q86SE8 214 aaKnown RBP17.22■□□□□ 0.35
LINC00598-205ENST00000615137 DZIP3Q86Y13 1208 aaKnown RBP17.22■□□□□ 0.35
LINC00598-205ENST00000615137 RALBP1Q15311 655 aa17.21■□□□□ 0.35
LINC00598-205ENST00000615137 C2CD5Q86YS7 1000 aa17.21■□□□□ 0.35
LINC00598-205ENST00000615137 MAPK8IP3Q9UPT6 1336 aa17.21■□□□□ 0.34
LINC00598-205ENST00000615137 C9orf131Q5VYM1 1079 aa17.2■□□□□ 0.34
LINC00598-205ENST00000615137 NBPF26B4DH59 902 aa17.19■□□□□ 0.34
LINC00598-205ENST00000615137 PRR5LQ6MZQ0 368 aa17.19■□□□□ 0.34
LINC00598-205ENST00000615137 NBPF10Q6P3W6 841 aaKnown RBP17.19■□□□□ 0.34
LINC00598-205ENST00000615137 NBPF15Q8N660 670 aa17.19■□□□□ 0.34
LINC00598-205ENST00000615137 RASSF7Q02833 373 aa17.18■□□□□ 0.34
LINC00598-205ENST00000615137 H0YIN7 160 aa17.17■□□□□ 0.34
LINC00598-205ENST00000615137 SETDB2Q96T68 719 aa17.17■□□□□ 0.34
LINC00598-205ENST00000615137 PNNQ9H307 717 aaKnown RBP17.17■□□□□ 0.34
LINC00598-205ENST00000615137 MYBBP1AQ9BQG0 1328 aaKnown RBP17.17■□□□□ 0.34
LINC00598-205ENST00000615137 KIF3CO14782 793 aa17.16■□□□□ 0.34
LINC00598-205ENST00000615137 NPHP1O15259 732 aa17.16■□□□□ 0.34
LINC00598-205ENST00000615137 TTLL6Q8N841 843 aa17.16■□□□□ 0.34
LINC00598-205ENST00000615137 ZNF622Q969S3 477 aaKnown RBP eCLIP17.16■□□□□ 0.34
LINC00598-205ENST00000615137 RNF181Q9P0P0 153 aa17.16■□□□□ 0.34
LINC00598-205ENST00000615137 NUP98P52948 1817 aa17.16■□□□□ 0.34
LINC00598-205ENST00000615137 EIF4A1P60842 406 aaKnown RBP17.15■□□□□ 0.34
LINC00598-205ENST00000615137 CCDC146Q8IYE0 955 aa17.15■□□□□ 0.34
LINC00598-205ENST00000615137 NGEFQ8N5V2 710 aa17.15■□□□□ 0.34
LINC00598-205ENST00000615137 CNBD1Q8NA66 436 aa17.15■□□□□ 0.34
LINC00598-205ENST00000615137 PNISRQ8TF01 805 aaKnown RBP17.15■□□□□ 0.34
LINC00598-205ENST00000615137 ZNF219Q9P2Y4 722 aaPredicted RBP17.15■□□□□ 0.34
LINC00598-205ENST00000615137 SLX4Q8IY92 1834 aa17.14■□□□□ 0.34
LINC00598-205ENST00000615137 RIPK4P57078 832 aa17.14■□□□□ 0.33
LINC00598-205ENST00000615137 BRIP1Q9BX63 1249 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms