RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 BARGINQ6ZT62 677 aa10.98□□□□□ -0.65
VPS11-206ENST00000614944 IFNL2Q8IZJ0 200 aa10.98□□□□□ -0.65
VPS11-206ENST00000614944 VAMP4O75379 141 aa10.97□□□□□ -0.65
VPS11-206ENST00000614944 EXOSC9Q06265 439 aaKnown RBP10.97□□□□□ -0.65
VPS11-206ENST00000614944 CHRNA2Q15822 529 aa10.97□□□□□ -0.65
VPS11-206ENST00000614944 NLRP2Q9NX02 1062 aa10.97□□□□□ -0.65
VPS11-206ENST00000614944 IL2RBP14784 551 aa10.97□□□□□ -0.65
VPS11-206ENST00000614944 ZNF530Q6P9A1 599 aaPredicted RBP10.97□□□□□ -0.65
VPS11-206ENST00000614944 DCAF5Q96JK2 942 aa10.97□□□□□ -0.65
VPS11-206ENST00000614944 FNBP4Q8N3X1 1017 aaPredicted RBP10.97□□□□□ -0.65
VPS11-206ENST00000614944 USHBP1Q8N6Y0 703 aa10.97□□□□□ -0.65
VPS11-206ENST00000614944 BCL9O00512 1426 aa10.97□□□□□ -0.65
VPS11-206ENST00000614944 CSB-PGBD3P0DP91 1061 aa10.96□□□□□ -0.66
VPS11-206ENST00000614944 MCCP23508 829 aa10.96□□□□□ -0.66
VPS11-206ENST00000614944 TMEM132AQ24JP5 1023 aa10.96□□□□□ -0.66
VPS11-206ENST00000614944 PXDNLA1KZ92 1463 aa10.96□□□□□ -0.66
VPS11-206ENST00000614944 ITGB4P16144 1822 aa10.96□□□□□ -0.66
VPS11-206ENST00000614944 SPATA31A1Q5TZJ5 1347 aa10.95□□□□□ -0.66
VPS11-206ENST00000614944 SPATA31A5Q5VU36 1347 aa10.95□□□□□ -0.66
VPS11-206ENST00000614944 SPATA31A7Q8IWB4 1347 aa10.95□□□□□ -0.66
VPS11-206ENST00000614944 BCL9LQ86UU0 1499 aa10.95□□□□□ -0.66
VPS11-206ENST00000614944 ERVV-2B6SEH9 535 aa10.95□□□□□ -0.66
VPS11-206ENST00000614944 MCM10Q7L590 875 aa10.95□□□□□ -0.66
VPS11-206ENST00000614944 MTERF4Q7Z6M4 381 aaKnown RBP10.95□□□□□ -0.66
VPS11-206ENST00000614944 PSEN1P49768 467 aa10.95□□□□□ -0.66
VPS11-206ENST00000614944 TOM1L2Q6ZVM7 507 aa10.95□□□□□ -0.66
VPS11-206ENST00000614944 TSR2Q969E8 191 aaKnown RBP10.95□□□□□ -0.66
VPS11-206ENST00000614944 BTG4Q9NY30 223 aa10.94□□□□□ -0.66
VPS11-206ENST00000614944 LETM1O95202 739 aaPredicted RBP10.94□□□□□ -0.66
VPS11-206ENST00000614944 EVA1CP58658 441 aa10.94□□□□□ -0.66
VPS11-206ENST00000614944 ZCRB1Q8TBF4 217 aaKnown RBP10.94□□□□□ -0.66
VPS11-206ENST00000614944 C5P01031 1676 aa10.94□□□□□ -0.66
VPS11-206ENST00000614944 ZBTB7CA1YPR0 619 aa10.94□□□□□ -0.66
VPS11-206ENST00000614944 IPO8O15397 1037 aaKnown RBP10.94□□□□□ -0.66
VPS11-206ENST00000614944 VPS72Q15906 364 aa10.94□□□□□ -0.66
VPS11-206ENST00000614944 TWISTNBQ3B726 338 aaPredicted RBP10.94□□□□□ -0.66
VPS11-206ENST00000614944 LARP1Q6PKG0 1096 aaKnown RBP10.94□□□□□ -0.66
VPS11-206ENST00000614944 MRPL50Q8N5N7 158 aaKnown RBP10.93□□□□□ -0.66
VPS11-206ENST00000614944 GTPBP4Q9BZE4 634 aaKnown RBP10.93□□□□□ -0.66
VPS11-206ENST00000614944 SLC52A2Q9HAB3 445 aa10.93□□□□□ -0.66
VPS11-206ENST00000614944 PTPRCP08575 1304 aa10.93□□□□□ -0.66
VPS11-206ENST00000614944 THUMPD2Q9BTF0 503 aaKnown RBP10.93□□□□□ -0.66
VPS11-206ENST00000614944 KCPQ6ZWJ8 1503 aa10.93□□□□□ -0.66
VPS11-206ENST00000614944 RREB1Q92766 1687 aa10.93□□□□□ -0.66
VPS11-206ENST00000614944 CYP27B1O15528 508 aa10.93□□□□□ -0.66
VPS11-206ENST00000614944 DCTN1Q14203 1278 aa10.93□□□□□ -0.66
VPS11-206ENST00000614944 TSPYL4Q9UJ04 414 aa10.93□□□□□ -0.66
VPS11-206ENST00000614944 ATRNO75882 1429 aa10.92□□□□□ -0.66
VPS11-206ENST00000614944 PHF14O94880 888 aa10.92□□□□□ -0.66
VPS11-206ENST00000614944 ZSCAN20P17040 1043 aaPredicted RBP10.92□□□□□ -0.66
VPS11-206ENST00000614944 PIP4K2BP78356 416 aa10.92□□□□□ -0.66
VPS11-206ENST00000614944 UNC5CLQ8IV45 518 aa10.92□□□□□ -0.66
VPS11-206ENST00000614944 ZKSCAN2Q63HK3 967 aa10.92□□□□□ -0.66
VPS11-206ENST00000614944 DOT1LQ8TEK3 1739 aa10.92□□□□□ -0.66
VPS11-206ENST00000614944 SSH1Q8WYL5 1049 aa10.92□□□□□ -0.66
VPS11-206ENST00000614944 EIF4A1P60842 406 aaKnown RBP10.91□□□□□ -0.66
VPS11-206ENST00000614944 C8orf58Q8NAV2 365 aa10.91□□□□□ -0.66
VPS11-206ENST00000614944 BCAR3O75815 825 aa10.91□□□□□ -0.66
VPS11-206ENST00000614944 TEFQ10587 303 aa10.91□□□□□ -0.66
VPS11-206ENST00000614944 KIAA1211Q6ZU35 1233 aa10.91□□□□□ -0.66
VPS11-206ENST00000614944 TRIM44Q96DX7 344 aaPredicted RBP10.91□□□□□ -0.66
VPS11-206ENST00000614944 ARID3AQ99856 593 aa10.91□□□□□ -0.66
VPS11-206ENST00000614944 FAM13BQ9NYF5 915 aa10.91□□□□□ -0.66
VPS11-206ENST00000614944 ABCC4O15439 1325 aa10.91□□□□□ -0.66
VPS11-206ENST00000614944 RGS12O14924 1447 aa10.9□□□□□ -0.66
VPS11-206ENST00000614944 SENP3-EIF4A1A0A087X0R7 540 aa10.9□□□□□ -0.66
VPS11-206ENST00000614944 NHSQ6T4R5 1651 aa10.9□□□□□ -0.66
VPS11-206ENST00000614944 CERS3Q8IU89 383 aa10.9□□□□□ -0.66
VPS11-206ENST00000614944 LGR6Q9HBX8 967 aa10.9□□□□□ -0.66
VPS11-206ENST00000614944 ATF7IPQ6VMQ6 1270 aa10.9□□□□□ -0.67
VPS11-206ENST00000614944 API5Q9BZZ5 524 aaKnown RBP10.9□□□□□ -0.67
VPS11-206ENST00000614944 ERBB4Q15303 1308 aa10.89□□□□□ -0.67
VPS11-206ENST00000614944 CCDC30Q5VVM6 783 aa10.89□□□□□ -0.67
VPS11-206ENST00000614944 SMC4Q9NTJ3 1288 aa10.89□□□□□ -0.67
VPS11-206ENST00000614944 TSPYL6Q8N831 410 aa10.89□□□□□ -0.67
VPS11-206ENST00000614944 BTBD11A6QL63 1104 aa10.88□□□□□ -0.67
VPS11-206ENST00000614944 ESPNB1AK53 854 aa10.88□□□□□ -0.67
VPS11-206ENST00000614944 ONECUT3O60422 494 aaPredicted RBP10.88□□□□□ -0.67
VPS11-206ENST00000614944 FRAT2O75474 233 aaPredicted RBP10.88□□□□□ -0.67
VPS11-206ENST00000614944 SLC20A2Q08357 652 aa10.88□□□□□ -0.67
VPS11-206ENST00000614944 MPRIPQ6WCQ1 1025 aa10.88□□□□□ -0.67
VPS11-206ENST00000614944 DNAJC2Q99543 621 aaKnown RBP10.88□□□□□ -0.67
VPS11-206ENST00000614944 STRN4Q9NRL3 753 aa10.87□□□□□ -0.67
VPS11-206ENST00000614944 TJP1Q07157 1748 aa10.87□□□□□ -0.67
VPS11-206ENST00000614944 HSPA1LP34931 641 aa10.87□□□□□ -0.67
VPS11-206ENST00000614944 DZIP1LQ8IYY4 767 aaKnown RBP10.87□□□□□ -0.67
VPS11-206ENST00000614944 ATP10DQ9P241 1426 aa10.87□□□□□ -0.67
VPS11-206ENST00000614944 ZBTB22O15209 634 aa10.86□□□□□ -0.67
VPS11-206ENST00000614944 MVPQ14764 893 aaKnown RBP10.86□□□□□ -0.67
VPS11-206ENST00000614944 ZNF790Q6PG37 636 aa10.86□□□□□ -0.67
VPS11-206ENST00000614944 TERF1P54274 439 aa10.86□□□□□ -0.67
VPS11-206ENST00000614944 TRIM27P14373 513 aa10.86□□□□□ -0.67
VPS11-206ENST00000614944 INTS3Q68E01 1043 aaKnown RBP10.86□□□□□ -0.67
VPS11-206ENST00000614944 NOB1Q9ULX3 412 aaKnown RBP10.86□□□□□ -0.67
VPS11-206ENST00000614944 DDX19BQ9UMR2 479 aa10.86□□□□□ -0.67
VPS11-206ENST00000614944 NUP188Q5SRE5 1749 aa10.86□□□□□ -0.67
VPS11-206ENST00000614944 GIGYF1O75420 1035 aaPredicted RBP10.85□□□□□ -0.67
VPS11-206ENST00000614944 CRBNQ96SW2 442 aa10.85□□□□□ -0.67
VPS11-206ENST00000614944 PSMD1Q99460 953 aa10.85□□□□□ -0.67
VPS11-206ENST00000614944 SBF2Q86WG5 1849 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms