RNA–Protein interactions for RNA: ENST00000614000.4

SYNRG-220, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 4,234 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-220ENST00000614000 MTERF4Q7Z6M4 381 aaKnown RBP6.77□□□□□ -1.32
SYNRG-220ENST00000614000 GJD4Q96KN9 370 aaPredicted RBP6.77□□□□□ -1.32
SYNRG-220ENST00000614000 CHMP4AQ9BY43 222 aa6.77□□□□□ -1.32
SYNRG-220ENST00000614000 PHF14O94880 888 aa6.77□□□□□ -1.33
SYNRG-220ENST00000614000 SMC4Q9NTJ3 1288 aa6.77□□□□□ -1.33
SYNRG-220ENST00000614000 CGNQ9P2M7 1197 aaKnown RBP6.77□□□□□ -1.33
SYNRG-220ENST00000614000 CBX1P83916 185 aa6.77□□□□□ -1.33
SYNRG-220ENST00000614000 CAVIN1Q6NZI2 390 aaKnown RBP6.77□□□□□ -1.33
SYNRG-220ENST00000614000 SKAP1Q86WV1 359 aa6.77□□□□□ -1.33
SYNRG-220ENST00000614000 GGNBP2Q9H3C7 697 aa6.77□□□□□ -1.33
SYNRG-220ENST00000614000 CCDC66A2RUB6 948 aa6.77□□□□□ -1.33
SYNRG-220ENST00000614000 TRIM6-TRIM34B2RNG4 842 aa6.77□□□□□ -1.33
SYNRG-220ENST00000614000 TAF7LQ5H9L4 462 aa6.77□□□□□ -1.33
SYNRG-220ENST00000614000 TEX35Q5T0J7 233 aa6.77□□□□□ -1.33
SYNRG-220ENST00000614000 MORC1Q86VD1 984 aa6.77□□□□□ -1.33
SYNRG-220ENST00000614000 RRP7AQ9Y3A4 280 aaKnown RBP6.77□□□□□ -1.33
SYNRG-220ENST00000614000 HSP90B1P14625 803 aaKnown RBP6.76□□□□□ -1.33
SYNRG-220ENST00000614000 PLCD3Q8N3E9 789 aa6.76□□□□□ -1.33
SYNRG-220ENST00000614000 TCP11L2Q8N4U5 519 aa6.76□□□□□ -1.33
SYNRG-220ENST00000614000 ANKRD24Q8TF21 1146 aa6.76□□□□□ -1.33
SYNRG-220ENST00000614000 CHMP4BQ9H444 224 aaKnown RBP6.76□□□□□ -1.33
SYNRG-220ENST00000614000 ST18O60284 1047 aa6.76□□□□□ -1.33
SYNRG-220ENST00000614000 ZNF521Q96K83 1311 aa6.76□□□□□ -1.33
SYNRG-220ENST00000614000 BECN2A8MW95 431 aa6.76□□□□□ -1.33
SYNRG-220ENST00000614000 FCHSD2O94868 740 aa6.76□□□□□ -1.33
SYNRG-220ENST00000614000 U2AF1L5P0DN76 240 aaPredicted RBP6.76□□□□□ -1.33
SYNRG-220ENST00000614000 RBM25P49756 843 aaKnown RBP6.76□□□□□ -1.33
SYNRG-220ENST00000614000 U2AF1Q01081 240 aaKnown RBP eCLIP6.76□□□□□ -1.33
SYNRG-220ENST00000614000 HOMER1Q86YM7 354 aa6.76□□□□□ -1.33
SYNRG-220ENST00000614000 BRCA1P38398 1863 aaKnown RBP6.76□□□□□ -1.33
SYNRG-220ENST00000614000 GPS2Q13227 327 aa6.75□□□□□ -1.33
SYNRG-220ENST00000614000 GOLGA6L19H0YKK7 550 aa6.75□□□□□ -1.33
SYNRG-220ENST00000614000 DHX37Q8IY37 1157 aaKnown RBP6.75□□□□□ -1.33
SYNRG-220ENST00000614000 FBXW7Q969H0 707 aa6.75□□□□□ -1.33
SYNRG-220ENST00000614000 SOS1Q07889 1333 aaPredicted RBP6.75□□□□□ -1.33
SYNRG-220ENST00000614000 RGL2O15211 777 aa6.75□□□□□ -1.33
SYNRG-220ENST00000614000 PDE3BQ13370 1112 aa6.75□□□□□ -1.33
SYNRG-220ENST00000614000 BACH2Q9BYV9 841 aa6.75□□□□□ -1.33
SYNRG-220ENST00000614000 GRPEL1Q9HAV7 217 aa6.75□□□□□ -1.33
SYNRG-220ENST00000614000 USP21Q9UK80 565 aa6.75□□□□□ -1.33
SYNRG-220ENST00000614000 EMILIN1Q9Y6C2 1016 aa6.75□□□□□ -1.33
SYNRG-220ENST00000614000 A0A1B0GUL6 1792 aa6.75□□□□□ -1.33
SYNRG-220ENST00000614000 PCDH11XQ9BZA7 1347 aa6.75□□□□□ -1.33
SYNRG-220ENST00000614000 PCDH11YQ9BZA8 1340 aa6.75□□□□□ -1.33
SYNRG-220ENST00000614000 SOX12O15370 315 aa6.74□□□□□ -1.33
SYNRG-220ENST00000614000 AMOTQ4VCS5 1084 aa6.74□□□□□ -1.33
SYNRG-220ENST00000614000 XPCQ01831 940 aaPredicted RBP6.74□□□□□ -1.33
SYNRG-220ENST00000614000 TMEM132AQ24JP5 1023 aa6.74□□□□□ -1.33
SYNRG-220ENST00000614000 ANKRD45Q5TZF3 282 aa6.74□□□□□ -1.33
SYNRG-220ENST00000614000 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.74□□□□□ -1.33
SYNRG-220ENST00000614000 DIAPH3Q9NSV4 1193 aa6.74□□□□□ -1.33
SYNRG-220ENST00000614000 DDX60Q8IY21 1712 aaKnown RBP6.74□□□□□ -1.33
SYNRG-220ENST00000614000 NUTM2FA1L443 756 aa6.74□□□□□ -1.33
SYNRG-220ENST00000614000 IPO8O15397 1037 aaKnown RBP6.74□□□□□ -1.33
SYNRG-220ENST00000614000 CCDC125Q86Z20 511 aa6.74□□□□□ -1.33
SYNRG-220ENST00000614000 EYA1Q99502 592 aa6.74□□□□□ -1.33
SYNRG-220ENST00000614000 BTG4Q9NY30 223 aa6.74□□□□□ -1.33
SYNRG-220ENST00000614000 IL16Q14005 1332 aa6.74□□□□□ -1.33
SYNRG-220ENST00000614000 LRRC37AA6NMS7 1700 aa6.74□□□□□ -1.33
SYNRG-220ENST00000614000 PNISRQ8TF01 805 aaKnown RBP6.74□□□□□ -1.33
SYNRG-220ENST00000614000 C22orf23Q9BZE7 217 aa6.74□□□□□ -1.33
SYNRG-220ENST00000614000 PRDM11Q9NQV5 511 aa6.74□□□□□ -1.33
SYNRG-220ENST00000614000 MAP3K5Q99683 1374 aa6.73□□□□□ -1.33
SYNRG-220ENST00000614000 MTHFSP49914 203 aa6.73□□□□□ -1.33
SYNRG-220ENST00000614000 NBPF6Q5VWK0 638 aa6.73□□□□□ -1.33
SYNRG-220ENST00000614000 NBPF4Q96M43 638 aa6.73□□□□□ -1.33
SYNRG-220ENST00000614000 DIAPH1O60610 1272 aaKnown RBP6.73□□□□□ -1.33
SYNRG-220ENST00000614000 ELL2O00472 640 aaPredicted RBP6.73□□□□□ -1.33
SYNRG-220ENST00000614000 HSP90AB3PQ58FF7 597 aa6.73□□□□□ -1.33
SYNRG-220ENST00000614000 GORABQ5T7V8 394 aa6.73□□□□□ -1.33
SYNRG-220ENST00000614000 LARP1Q6PKG0 1096 aaKnown RBP6.73□□□□□ -1.33
SYNRG-220ENST00000614000 POTEAQ6S8J7 498 aa6.73□□□□□ -1.33
SYNRG-220ENST00000614000 IL2RBP14784 551 aa6.72□□□□□ -1.33
SYNRG-220ENST00000614000 HSP90AB2PQ58FF8 381 aa6.72□□□□□ -1.33
SYNRG-220ENST00000614000 CABLES1Q8TDN4 633 aa6.72□□□□□ -1.33
SYNRG-220ENST00000614000 CNKSR2Q8WXI2 1034 aa6.72□□□□□ -1.33
SYNRG-220ENST00000614000 PDCL3Q9H2J4 239 aa6.72□□□□□ -1.33
SYNRG-220ENST00000614000 TPM4P67936 248 aa6.72□□□□□ -1.33
SYNRG-220ENST00000614000 SPC24Q8NBT2 197 aa6.72□□□□□ -1.33
SYNRG-220ENST00000614000 NGLY1Q96IV0 654 aa6.72□□□□□ -1.33
SYNRG-220ENST00000614000 CCDC39Q9UFE4 941 aa6.72□□□□□ -1.33
SYNRG-220ENST00000614000 H0YHG0 523 aa6.72□□□□□ -1.33
SYNRG-220ENST00000614000 TPM3P06753 285 aa6.72□□□□□ -1.33
SYNRG-220ENST00000614000 MNS1Q8NEH6 495 aa6.72□□□□□ -1.33
SYNRG-220ENST00000614000 MYH14Q7Z406 1995 aaKnown RBP6.72□□□□□ -1.33
SYNRG-220ENST00000614000 HMGB2P26583 209 aaKnown RBP6.71□□□□□ -1.33
SYNRG-220ENST00000614000 NOM1Q5C9Z4 860 aaKnown RBP6.71□□□□□ -1.33
SYNRG-220ENST00000614000 CDCA7LQ96GN5 454 aa6.71□□□□□ -1.33
SYNRG-220ENST00000614000 KIF16BQ96L93 1317 aa6.71□□□□□ -1.33
SYNRG-220ENST00000614000 PES1O00541 588 aaKnown RBP6.71□□□□□ -1.34
SYNRG-220ENST00000614000 IGSF3O75054 1194 aa6.71□□□□□ -1.34
SYNRG-220ENST00000614000 SF3A1Q15459 793 aaKnown RBP6.71□□□□□ -1.34
SYNRG-220ENST00000614000 LNPKQ9C0E8 428 aa6.71□□□□□ -1.34
SYNRG-220ENST00000614000 NUP98P52948 1817 aa6.71□□□□□ -1.34
SYNRG-220ENST00000614000 ERVV-2B6SEH9 535 aa6.71□□□□□ -1.34
SYNRG-220ENST00000614000 HMGN5P82970 282 aaKnown RBP6.71□□□□□ -1.34
SYNRG-220ENST00000614000 CCDC173Q0VFZ6 552 aa6.71□□□□□ -1.34
SYNRG-220ENST00000614000 RRS1Q15050 365 aaKnown RBP6.71□□□□□ -1.34
SYNRG-220ENST00000614000 KLHL34Q8N239 644 aa6.71□□□□□ -1.34
SYNRG-220ENST00000614000 ZNF526Q8TF50 670 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms