RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 REC8O95072 547 aa13.7□□□□□ -0.22
ATF3-211ENST00000613954 ANKRD44Q8N8A2 993 aa13.7□□□□□ -0.22
ATF3-211ENST00000613954 LMBRD1Q9NUN5 540 aa13.7□□□□□ -0.22
ATF3-211ENST00000613954 LTBP4Q8N2S1 1624 aa13.7□□□□□ -0.22
ATF3-211ENST00000613954 KRT24Q2M2I5 525 aa13.69□□□□□ -0.22
ATF3-211ENST00000613954 ZSCAN23Q3MJ62 389 aa13.69□□□□□ -0.22
ATF3-211ENST00000613954 KIAA1211Q6ZU35 1233 aa13.69□□□□□ -0.22
ATF3-211ENST00000613954 PDCL3Q9H2J4 239 aa13.69□□□□□ -0.22
ATF3-211ENST00000613954 ABCA3Q99758 1704 aa13.69□□□□□ -0.22
ATF3-211ENST00000613954 PLEKHG2Q9H7P9 1386 aa13.69□□□□□ -0.22
ATF3-211ENST00000613954 OVOS2A0A0G2JMS6 1433 aa13.69□□□□□ -0.22
ATF3-211ENST00000613954 CSB-PGBD3P0DP91 1061 aa13.69□□□□□ -0.22
ATF3-211ENST00000613954 C1orf141Q5JVX7 400 aa13.69□□□□□ -0.22
ATF3-211ENST00000613954 AK9Q5TCS8 1911 aa13.69□□□□□ -0.22
ATF3-211ENST00000613954 CAVIN1Q6NZI2 390 aaKnown RBP13.68□□□□□ -0.22
ATF3-211ENST00000613954 RAPGEF4Q8WZA2 1011 aa13.68□□□□□ -0.22
ATF3-211ENST00000613954 SOS1Q07889 1333 aaPredicted RBP13.68□□□□□ -0.22
ATF3-211ENST00000613954 NCLP19338 710 aaKnown RBP13.68□□□□□ -0.22
ATF3-211ENST00000613954 PDLIM2Q96JY6 352 aa13.68□□□□□ -0.22
ATF3-211ENST00000613954 PRDM11Q9NQV5 511 aa13.68□□□□□ -0.22
ATF3-211ENST00000613954 NOL7Q9UMY1 257 aaKnown RBP13.68□□□□□ -0.22
ATF3-211ENST00000613954 TATP17735 454 aaPredicted RBP13.67□□□□□ -0.22
ATF3-211ENST00000613954 ATP10DQ9P241 1426 aa13.67□□□□□ -0.22
ATF3-211ENST00000613954 ZNF500O60304 480 aaPredicted RBP13.66□□□□□ -0.22
ATF3-211ENST00000613954 MCM5P33992 734 aa13.66□□□□□ -0.22
ATF3-211ENST00000613954 LGR6Q9HBX8 967 aa13.66□□□□□ -0.22
ATF3-211ENST00000613954 ROBO1Q9Y6N7 1651 aa13.66□□□□□ -0.22
ATF3-211ENST00000613954 RNMTO43148 476 aaKnown RBP13.66□□□□□ -0.22
ATF3-211ENST00000613954 VSIG10Q8N0Z9 540 aa13.66□□□□□ -0.22
ATF3-211ENST00000613954 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.66□□□□□ -0.22
ATF3-211ENST00000613954 PTPRCP08575 1304 aa13.66□□□□□ -0.22
ATF3-211ENST00000613954 MBD3O95983 291 aa13.65□□□□□ -0.22
ATF3-211ENST00000613954 SDSP20132 328 aa13.65□□□□□ -0.22
ATF3-211ENST00000613954 MCM2P49736 904 aa13.65□□□□□ -0.22
ATF3-211ENST00000613954 TEFQ10587 303 aa13.65□□□□□ -0.22
ATF3-211ENST00000613954 CEP85Q6P2H3 762 aa13.65□□□□□ -0.22
ATF3-211ENST00000613954 SPG7Q9UQ90 795 aa13.65□□□□□ -0.22
ATF3-211ENST00000613954 AHDC1Q5TGY3 1603 aaPredicted RBP13.65□□□□□ -0.22
ATF3-211ENST00000613954 MEGF6O75095 1541 aa13.64□□□□□ -0.23
ATF3-211ENST00000613954 ERC2O15083 957 aa13.64□□□□□ -0.23
ATF3-211ENST00000613954 CSPP1Q1MSJ5 1256 aa13.64□□□□□ -0.23
ATF3-211ENST00000613954 MPRIPQ6WCQ1 1025 aa13.64□□□□□ -0.23
ATF3-211ENST00000613954 MAP7D2Q96T17 732 aa13.64□□□□□ -0.23
ATF3-211ENST00000613954 WDR17Q8IZU2 1322 aa13.64□□□□□ -0.23
ATF3-211ENST00000613954 HMMRO75330 724 aa13.64□□□□□ -0.23
ATF3-211ENST00000613954 PRPF40AO75400 957 aaKnown RBP13.64□□□□□ -0.23
ATF3-211ENST00000613954 KCNA4P22459 653 aa13.64□□□□□ -0.23
ATF3-211ENST00000613954 LRSAM1Q6UWE0 723 aa13.64□□□□□ -0.23
ATF3-211ENST00000613954 KDM3BQ7LBC6 1761 aa13.64□□□□□ -0.23
ATF3-211ENST00000613954 ADAMTS7Q9UKP4 1686 aa13.64□□□□□ -0.23
ATF3-211ENST00000613954 COL5A2P05997 1499 aaPredicted RBP13.63□□□□□ -0.23
ATF3-211ENST00000613954 RBSNQ9H1K0 784 aa13.63□□□□□ -0.23
ATF3-211ENST00000613954 OSBPL3Q9H4L5 887 aa13.63□□□□□ -0.23
ATF3-211ENST00000613954 RGS12O14924 1447 aa13.63□□□□□ -0.23
ATF3-211ENST00000613954 PRIM1P49642 420 aaKnown RBP13.63□□□□□ -0.23
ATF3-211ENST00000613954 CCDC30Q5VVM6 783 aa13.63□□□□□ -0.23
ATF3-211ENST00000613954 C16orf71Q8IYS4 520 aaPredicted RBP13.63□□□□□ -0.23
ATF3-211ENST00000613954 SLC4A2P04920 1241 aa13.62□□□□□ -0.23
ATF3-211ENST00000613954 STK31Q9BXU1 1019 aa13.62□□□□□ -0.23
ATF3-211ENST00000613954 CCDC39Q9UFE4 941 aa13.62□□□□□ -0.23
ATF3-211ENST00000613954 PKD1L3Q7Z443 1732 aa13.62□□□□□ -0.23
ATF3-211ENST00000613954 BTBD11A6QL63 1104 aa13.61□□□□□ -0.23
ATF3-211ENST00000613954 GPT2Q8TD30 523 aa13.61□□□□□ -0.23
ATF3-211ENST00000613954 ZKSCAN5Q9Y2L8 839 aa13.61□□□□□ -0.23
ATF3-211ENST00000613954 HOXB7P09629 217 aa13.61□□□□□ -0.23
ATF3-211ENST00000613954 PHKG2P15735 406 aa13.61□□□□□ -0.23
ATF3-211ENST00000613954 EIF4A1P60842 406 aaKnown RBP13.61□□□□□ -0.23
ATF3-211ENST00000613954 PKP1Q13835 747 aa13.61□□□□□ -0.23
ATF3-211ENST00000613954 TOM1L2Q6ZVM7 507 aa13.61□□□□□ -0.23
ATF3-211ENST00000613954 ZGPATQ8N5A5 531 aaKnown RBP13.61□□□□□ -0.23
ATF3-211ENST00000613954 CHMP4AQ9BY43 222 aa13.61□□□□□ -0.23
ATF3-211ENST00000613954 ZMYND15Q9H091 742 aa13.61□□□□□ -0.23
ATF3-211ENST00000613954 MCCP23508 829 aa13.6□□□□□ -0.23
ATF3-211ENST00000613954 IFNL2Q8IZJ0 200 aa13.6□□□□□ -0.23
ATF3-211ENST00000613954 SYAP1Q96A49 352 aaPredicted RBP13.6□□□□□ -0.23
ATF3-211ENST00000613954 ZDHHC9Q9Y397 364 aa13.6□□□□□ -0.23
ATF3-211ENST00000613954 COL22A1Q8NFW1 1626 aaPredicted RBP13.6□□□□□ -0.23
ATF3-211ENST00000613954 SIPA1L3O60292 1781 aaPredicted RBP13.6□□□□□ -0.23
ATF3-211ENST00000613954 MTERF4Q7Z6M4 381 aaKnown RBP13.59□□□□□ -0.23
ATF3-211ENST00000613954 OTUD7AQ8TE49 926 aaPredicted RBP13.59□□□□□ -0.23
ATF3-211ENST00000613954 PARP4Q9UKK3 1724 aaKnown RBP13.59□□□□□ -0.23
ATF3-211ENST00000613954 KDM6AO15550 1401 aaPredicted RBP13.59□□□□□ -0.23
ATF3-211ENST00000613954 ANAPC15P60006 121 aa13.59□□□□□ -0.23
ATF3-211ENST00000613954 INTS4Q96HW7 963 aaKnown RBP13.59□□□□□ -0.23
ATF3-211ENST00000613954 CARD10Q9BWT7 1032 aa13.59□□□□□ -0.23
ATF3-211ENST00000613954 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.24
ATF3-211ENST00000613954 TMEM63CQ9P1W3 806 aa13.58□□□□□ -0.24
ATF3-211ENST00000613954 SMARCA5O60264 1052 aaPredicted RBP13.57□□□□□ -0.24
ATF3-211ENST00000613954 BRD1O95696 1058 aa13.57□□□□□ -0.24
ATF3-211ENST00000613954 EVA1CP58658 441 aa13.57□□□□□ -0.24
ATF3-211ENST00000613954 HDGFL1Q5TGJ6 251 aa13.57□□□□□ -0.24
ATF3-211ENST00000613954 G2E3Q7L622 706 aa13.57□□□□□ -0.24
ATF3-211ENST00000613954 DCAF5Q96JK2 942 aa13.57□□□□□ -0.24
ATF3-211ENST00000613954 R3HCC1Q9Y3T6 440 aaKnown RBP13.57□□□□□ -0.24
ATF3-211ENST00000613954 SYCE3A1L190 88 aa13.57□□□□□ -0.24
ATF3-211ENST00000613954 CYP27B1O15528 508 aa13.57□□□□□ -0.24
ATF3-211ENST00000613954 KCNQ3O43525 872 aa13.57□□□□□ -0.24
ATF3-211ENST00000613954 PHF14O94880 888 aa13.57□□□□□ -0.24
ATF3-211ENST00000613954 CCT4P50991 539 aaKnown RBP13.57□□□□□ -0.24
ATF3-211ENST00000613954 NEK4P51957 841 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms