RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 SMIM5Q71RC9 77 aa10.8□□□□□ -0.68
PSMB3-208ENST00000613870 LINC00116Q8NCU8 138 aa10.8□□□□□ -0.68
PSMB3-208ENST00000613870 SLC4A9Q96Q91 983 aa10.8□□□□□ -0.68
PSMB3-208ENST00000613870 MSH5O43196 834 aa10.79□□□□□ -0.68
PSMB3-208ENST00000613870 ZNF853P0CG23 659 aa10.79□□□□□ -0.68
PSMB3-208ENST00000613870 HMGB2P26583 209 aaKnown RBP10.79□□□□□ -0.68
PSMB3-208ENST00000613870 POLD1P28340 1107 aa10.79□□□□□ -0.68
PSMB3-208ENST00000613870 IRX6P78412 446 aaPredicted RBP10.79□□□□□ -0.68
PSMB3-208ENST00000613870 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.79□□□□□ -0.68
PSMB3-208ENST00000613870 NFATC2IPQ8NCF5 419 aa10.79□□□□□ -0.68
PSMB3-208ENST00000613870 FLAD1Q8NFF5 587 aa10.79□□□□□ -0.68
PSMB3-208ENST00000613870 GTF3C3Q9Y5Q9 886 aa10.79□□□□□ -0.68
PSMB3-208ENST00000613870 FKBP8Q14318 412 aa10.78□□□□□ -0.68
PSMB3-208ENST00000613870 TWISTNBQ3B726 338 aaPredicted RBP10.78□□□□□ -0.68
PSMB3-208ENST00000613870 AK7Q96M32 723 aa10.78□□□□□ -0.68
PSMB3-208ENST00000613870 SMC4Q9NTJ3 1288 aa10.78□□□□□ -0.68
PSMB3-208ENST00000613870 ZNF831Q5JPB2 1677 aa10.78□□□□□ -0.68
PSMB3-208ENST00000613870 CT47B1P0C2W7 299 aaPredicted RBP10.77□□□□□ -0.69
PSMB3-208ENST00000613870 MSL1Q68DK7 614 aa10.77□□□□□ -0.69
PSMB3-208ENST00000613870 TTC5Q8N0Z6 440 aa10.77□□□□□ -0.69
PSMB3-208ENST00000613870 C8orf58Q8NAV2 365 aa10.77□□□□□ -0.69
PSMB3-208ENST00000613870 FRAT1Q92837 279 aaPredicted RBP10.77□□□□□ -0.69
PSMB3-208ENST00000613870 RBM42Q9BTD8 480 aaKnown RBP10.77□□□□□ -0.69
PSMB3-208ENST00000613870 BCL2L13Q9BXK5 485 aa10.77□□□□□ -0.69
PSMB3-208ENST00000613870 SLC52A2Q9HAB3 445 aa10.77□□□□□ -0.69
PSMB3-208ENST00000613870 BABAM1Q9NWV8 329 aa10.77□□□□□ -0.69
PSMB3-208ENST00000613870 COL5A3P25940 1745 aaPredicted RBP10.77□□□□□ -0.69
PSMB3-208ENST00000613870 MYH14Q7Z406 1995 aaKnown RBP10.77□□□□□ -0.69
PSMB3-208ENST00000613870 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.76□□□□□ -0.69
PSMB3-208ENST00000613870 DCAF8L1A6NGE4 600 aa10.76□□□□□ -0.69
PSMB3-208ENST00000613870 TCERG1O14776 1098 aaKnown RBP10.76□□□□□ -0.69
PSMB3-208ENST00000613870 BCAR3O75815 825 aa10.76□□□□□ -0.69
PSMB3-208ENST00000613870 PHF14O94880 888 aa10.76□□□□□ -0.69
PSMB3-208ENST00000613870 SSFA2P28290 1259 aa10.76□□□□□ -0.69
PSMB3-208ENST00000613870 RRP1P56182 461 aaKnown RBP10.76□□□□□ -0.69
PSMB3-208ENST00000613870 CEMIPQ8WUJ3 1361 aa10.76□□□□□ -0.69
PSMB3-208ENST00000613870 GNPATO15228 680 aa10.75□□□□□ -0.69
PSMB3-208ENST00000613870 PLIN1O60240 522 aa10.75□□□□□ -0.69
PSMB3-208ENST00000613870 PTCD1O75127 700 aaKnown RBP10.75□□□□□ -0.69
PSMB3-208ENST00000613870 RARSP54136 660 aaKnown RBP10.75□□□□□ -0.69
PSMB3-208ENST00000613870 KRT24Q2M2I5 525 aa10.75□□□□□ -0.69
PSMB3-208ENST00000613870 KLHL34Q8N239 644 aa10.75□□□□□ -0.69
PSMB3-208ENST00000613870 TSPYL6Q8N831 410 aa10.75□□□□□ -0.69
PSMB3-208ENST00000613870 ADAMTS7Q9UKP4 1686 aa10.75□□□□□ -0.69
PSMB3-208ENST00000613870 SLC39A6Q13433 755 aa10.74□□□□□ -0.69
PSMB3-208ENST00000613870 RC3H1Q5TC82 1133 aaKnown RBP10.74□□□□□ -0.69
PSMB3-208ENST00000613870 NLGN2Q8NFZ4 835 aa10.74□□□□□ -0.69
PSMB3-208ENST00000613870 NECTIN2Q92692 538 aa10.74□□□□□ -0.69
PSMB3-208ENST00000613870 KCNQ3O43525 872 aa10.73□□□□□ -0.69
PSMB3-208ENST00000613870 VAMP4O75379 141 aa10.73□□□□□ -0.69
PSMB3-208ENST00000613870 EIF2S2P20042 333 aaKnown RBP10.73□□□□□ -0.69
PSMB3-208ENST00000613870 YY1P25490 414 aa10.73□□□□□ -0.69
PSMB3-208ENST00000613870 SSH1Q8WYL5 1049 aa10.73□□□□□ -0.69
PSMB3-208ENST00000613870 ZNF428Q96B54 188 aa10.73□□□□□ -0.69
PSMB3-208ENST00000613870 STK31Q9BXU1 1019 aa10.73□□□□□ -0.69
PSMB3-208ENST00000613870 MRC1P22897 1456 aa10.73□□□□□ -0.69
PSMB3-208ENST00000613870 TJP1Q07157 1748 aa10.72□□□□□ -0.69
PSMB3-208ENST00000613870 CHD4Q14839 1912 aa10.72□□□□□ -0.69
PSMB3-208ENST00000613870 IPO8O15397 1037 aaKnown RBP10.72□□□□□ -0.69
PSMB3-208ENST00000613870 RPS6KA4O75676 772 aa10.72□□□□□ -0.69
PSMB3-208ENST00000613870 EIF4A1P60842 406 aaKnown RBP10.72□□□□□ -0.69
PSMB3-208ENST00000613870 ALDH1L2Q3SY69 923 aa10.72□□□□□ -0.69
PSMB3-208ENST00000613870 TRAPPC3LQ5T215 181 aa10.72□□□□□ -0.69
PSMB3-208ENST00000613870 CCDC30Q5VVM6 783 aa10.72□□□□□ -0.69
PSMB3-208ENST00000613870 ZNF790Q6PG37 636 aa10.72□□□□□ -0.69
PSMB3-208ENST00000613870 ARHGEF1Q92888 912 aaKnown RBP10.72□□□□□ -0.69
PSMB3-208ENST00000613870 CHMP4AQ9BY43 222 aa10.72□□□□□ -0.69
PSMB3-208ENST00000613870 RTCBQ9Y3I0 505 aaKnown RBP10.72□□□□□ -0.69
PSMB3-208ENST00000613870 CNTNAP4Q9C0A0 1308 aa10.72□□□□□ -0.69
PSMB3-208ENST00000613870 CICQ96RK0 1608 aaPredicted RBP10.72□□□□□ -0.69
PSMB3-208ENST00000613870 HDGFL1Q5TGJ6 251 aa10.71□□□□□ -0.69
PSMB3-208ENST00000613870 FTSJ3Q8IY81 847 aaKnown RBP10.71□□□□□ -0.69
PSMB3-208ENST00000613870 FMNL2Q96PY5 1086 aa10.71□□□□□ -0.69
PSMB3-208ENST00000613870 KCPQ6ZWJ8 1503 aa10.7□□□□□ -0.7
PSMB3-208ENST00000613870 KIF16BQ96L93 1317 aa10.7□□□□□ -0.7
PSMB3-208ENST00000613870 MS4A1P11836 297 aa10.7□□□□□ -0.7
PSMB3-208ENST00000613870 CRKLP46109 303 aaKnown RBP10.7□□□□□ -0.7
PSMB3-208ENST00000613870 GPR162Q16538 588 aa10.7□□□□□ -0.7
PSMB3-208ENST00000613870 ZKSCAN2Q63HK3 967 aa10.7□□□□□ -0.7
PSMB3-208ENST00000613870 DNAJC10Q8IXB1 793 aa10.7□□□□□ -0.7
PSMB3-208ENST00000613870 MRPL50Q8N5N7 158 aaKnown RBP10.7□□□□□ -0.7
PSMB3-208ENST00000613870 NOB1Q9ULX3 412 aaKnown RBP10.7□□□□□ -0.7
PSMB3-208ENST00000613870 CD2APQ9Y5K6 639 aa10.7□□□□□ -0.7
PSMB3-208ENST00000613870 SIPA1L3O60292 1781 aaPredicted RBP10.7□□□□□ -0.7
PSMB3-208ENST00000613870 C4AP0C0L4 1744 aa10.7□□□□□ -0.7
PSMB3-208ENST00000613870 SOS1Q07889 1333 aaPredicted RBP10.69□□□□□ -0.7
PSMB3-208ENST00000613870 RNF123Q5XPI4 1314 aa10.69□□□□□ -0.7
PSMB3-208ENST00000613870 SLC4A2P04920 1241 aa10.69□□□□□ -0.7
PSMB3-208ENST00000613870 SNRPA1P09661 255 aaKnown RBP10.69□□□□□ -0.7
PSMB3-208ENST00000613870 GYS1P13807 737 aa10.69□□□□□ -0.7
PSMB3-208ENST00000613870 ADRA2BP18089 450 aa10.69□□□□□ -0.7
PSMB3-208ENST00000613870 INTS5Q6P9B9 1019 aaKnown RBP10.69□□□□□ -0.7
PSMB3-208ENST00000613870 CLUAP1Q96AJ1 413 aa10.69□□□□□ -0.7
PSMB3-208ENST00000613870 UBR2Q8IWV8 1755 aa10.69□□□□□ -0.7
PSMB3-208ENST00000613870 HOXB7P09629 217 aa10.68□□□□□ -0.7
PSMB3-208ENST00000613870 CYP19A1P11511 503 aaPredicted RBP10.68□□□□□ -0.7
PSMB3-208ENST00000613870 YBX3P16989 372 aaKnown RBP eCLIP10.68□□□□□ -0.71e-8■□□□□ 11.3
PSMB3-208ENST00000613870 RFC4P35249 363 aa10.68□□□□□ -0.7
PSMB3-208ENST00000613870 PELP1Q8IZL8 1130 aaKnown RBP10.68□□□□□ -0.7
PSMB3-208ENST00000613870 NLGN1Q8N2Q7 840 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms