RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 FBXO31Q5XUX0 539 aaPredicted RBP8.36□□□□□ -1.07
CDKAL1-204ENST00000613575 TCP11L2Q8N4U5 519 aa8.36□□□□□ -1.07
CDKAL1-204ENST00000613575 SIRT1Q96EB6 747 aa8.36□□□□□ -1.07
CDKAL1-204ENST00000613575 GPCPD1Q9NPB8 672 aa8.36□□□□□ -1.07
CDKAL1-204ENST00000613575 ABCC11Q96J66 1382 aa8.36□□□□□ -1.07
CDKAL1-204ENST00000613575 MED14O60244 1454 aa8.36□□□□□ -1.07
CDKAL1-204ENST00000613575 REREQ9P2R6 1566 aa8.36□□□□□ -1.07
CDKAL1-204ENST00000613575 BRPF1P55201 1214 aaPredicted RBP8.35□□□□□ -1.07
CDKAL1-204ENST00000613575 NUTM2DQ5VT03 806 aaPredicted RBP8.35□□□□□ -1.07
CDKAL1-204ENST00000613575 GPBP1L1Q9HC44 474 aaPredicted RBP8.35□□□□□ -1.07
CDKAL1-204ENST00000613575 TERF2IPQ9NYB0 399 aa8.35□□□□□ -1.07
CDKAL1-204ENST00000613575 TULP4Q9NRJ4 1543 aa8.35□□□□□ -1.07
CDKAL1-204ENST00000613575 YTHDC2Q9H6S0 1430 aaKnown RBP8.34□□□□□ -1.07
CDKAL1-204ENST00000613575 PNPLA6Q8IY17 1366 aa8.34□□□□□ -1.07
CDKAL1-204ENST00000613575 FYB1O15117 783 aa8.34□□□□□ -1.07
CDKAL1-204ENST00000613575 BCAR3O75815 825 aa8.34□□□□□ -1.07
CDKAL1-204ENST00000613575 CT47B1P0C2W7 299 aaPredicted RBP8.34□□□□□ -1.07
CDKAL1-204ENST00000613575 PARP9Q8IXQ6 854 aa8.34□□□□□ -1.07
CDKAL1-204ENST00000613575 ZFRQ96KR1 1074 aaKnown RBP8.34□□□□□ -1.07
CDKAL1-204ENST00000613575 PLEKHF1Q96S99 279 aa8.34□□□□□ -1.07
CDKAL1-204ENST00000613575 YY1AP1Q9H869 796 aa8.34□□□□□ -1.07
CDKAL1-204ENST00000613575 TMEM131LA2VDJ0 1609 aa8.34□□□□□ -1.07
CDKAL1-204ENST00000613575 PTPRMP28827 1452 aa8.34□□□□□ -1.07
CDKAL1-204ENST00000613575 RNF40O75150 1001 aa8.34□□□□□ -1.08
CDKAL1-204ENST00000613575 RARSP54136 660 aaKnown RBP8.34□□□□□ -1.08
CDKAL1-204ENST00000613575 SWT1Q5T5J6 900 aaKnown RBP8.34□□□□□ -1.08
CDKAL1-204ENST00000613575 DNAJC2Q99543 621 aaKnown RBP8.34□□□□□ -1.08
CDKAL1-204ENST00000613575 TMEM134Q9H6X4 195 aa8.34□□□□□ -1.08
CDKAL1-204ENST00000613575 SLC4A3P48751 1232 aa8.33□□□□□ -1.08
CDKAL1-204ENST00000613575 TMED8Q6PL24 325 aaPredicted RBP8.33□□□□□ -1.08
CDKAL1-204ENST00000613575 GIGYF2Q6Y7W6 1299 aaKnown RBP8.33□□□□□ -1.08
CDKAL1-204ENST00000613575 SAMD7Q7Z3H4 446 aa8.33□□□□□ -1.08
CDKAL1-204ENST00000613575 PRAM1Q96QH2 718 aa8.33□□□□□ -1.08
CDKAL1-204ENST00000613575 REPIN1Q9BWE0 567 aaKnown RBP8.33□□□□□ -1.08
CDKAL1-204ENST00000613575 KDM4CQ9H3R0 1056 aa8.33□□□□□ -1.08
CDKAL1-204ENST00000613575 ARHGEF40Q8TER5 1519 aa8.32□□□□□ -1.08
CDKAL1-204ENST00000613575 IQSEC2Q5JU85 1478 aa8.32□□□□□ -1.08
CDKAL1-204ENST00000613575 A0A1W2PP64 1363 aa8.32□□□□□ -1.08
CDKAL1-204ENST00000613575 QRICH2Q9H0J4 1663 aa8.32□□□□□ -1.08
CDKAL1-204ENST00000613575 CDK19Q9BWU1 502 aa8.32□□□□□ -1.08
CDKAL1-204ENST00000613575 POGKQ9P215 609 aa8.32□□□□□ -1.08
CDKAL1-204ENST00000613575 STK26Q9P289 416 aa8.32□□□□□ -1.08
CDKAL1-204ENST00000613575 CD163L1Q9NR16 1453 aa8.32□□□□□ -1.08
CDKAL1-204ENST00000613575 IL16Q14005 1332 aa8.31□□□□□ -1.08
CDKAL1-204ENST00000613575 DDX11L8A8MPP1 907 aa8.31□□□□□ -1.08
CDKAL1-204ENST00000613575 SRPK2P78362 688 aaKnown RBP8.31□□□□□ -1.08
CDKAL1-204ENST00000613575 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.31□□□□□ -1.08
CDKAL1-204ENST00000613575 ANKK1Q8NFD2 765 aa8.31□□□□□ -1.08
CDKAL1-204ENST00000613575 WNT2BQ93097 391 aa8.31□□□□□ -1.08
CDKAL1-204ENST00000613575 MYH16Q9H6N6 1097 aa8.31□□□□□ -1.08
CDKAL1-204ENST00000613575 NLRP1Q9C000 1473 aa8.31□□□□□ -1.08
CDKAL1-204ENST00000613575 DLC1Q96QB1 1528 aa8.31□□□□□ -1.08
CDKAL1-204ENST00000613575 U2AF1L5P0DN76 240 aaPredicted RBP8.3□□□□□ -1.08
CDKAL1-204ENST00000613575 U2AF1Q01081 240 aaKnown RBP eCLIP8.3□□□□□ -1.08
CDKAL1-204ENST00000613575 FAM43BQ6ZT52 329 aaPredicted RBP8.3□□□□□ -1.08
CDKAL1-204ENST00000613575 HDGFL2Q7Z4V5 671 aaPredicted RBP8.3□□□□□ -1.08
CDKAL1-204ENST00000613575 LRCH3Q96II8 777 aa8.3□□□□□ -1.08
CDKAL1-204ENST00000613575 A2ML1A8K2U0 1454 aa8.3□□□□□ -1.08
CDKAL1-204ENST00000613575 ARHGEF28Q8N1W1 1705 aaKnown RBP8.3□□□□□ -1.08
CDKAL1-204ENST00000613575 SSTR3P32745 418 aaPredicted RBP8.3□□□□□ -1.08
CDKAL1-204ENST00000613575 SULF1Q8IWU6 871 aa8.3□□□□□ -1.08
CDKAL1-204ENST00000613575 RDH13Q8NBN7 331 aa8.3□□□□□ -1.08
CDKAL1-204ENST00000613575 TMUB1Q9BVT8 246 aa8.3□□□□□ -1.08
CDKAL1-204ENST00000613575 GEMIN8Q9NWZ8 242 aaKnown RBP8.3□□□□□ -1.08
CDKAL1-204ENST00000613575 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.3□□□□□ -1.08
CDKAL1-204ENST00000613575 CABP1Q9NZU7 370 aa8.3□□□□□ -1.08
CDKAL1-204ENST00000613575 ALKQ9UM73 1620 aa8.3□□□□□ -1.08
CDKAL1-204ENST00000613575 SHPRHQ149N8 1683 aa8.29□□□□□ -1.08
CDKAL1-204ENST00000613575 PREX1Q8TCU6 1659 aa8.29□□□□□ -1.08
CDKAL1-204ENST00000613575 IGHDP01880 384 aa8.29□□□□□ -1.08
CDKAL1-204ENST00000613575 TMPOP42166 694 aaKnown RBP8.29□□□□□ -1.08
CDKAL1-204ENST00000613575 NBPF20Q3BBV1 942 aa8.29□□□□□ -1.08
CDKAL1-204ENST00000613575 SLF2Q8IX21 1173 aa8.29□□□□□ -1.08
CDKAL1-204ENST00000613575 CLUAP1Q96AJ1 413 aa8.29□□□□□ -1.08
CDKAL1-204ENST00000613575 GGNBP2Q9H3C7 697 aa8.29□□□□□ -1.08
CDKAL1-204ENST00000613575 CFAP65Q6ZU64 1925 aaKnown RBP8.29□□□□□ -1.08
CDKAL1-204ENST00000613575 COL3A1P02461 1466 aaPredicted RBP8.28□□□□□ -1.08
CDKAL1-204ENST00000613575 SAFB2Q14151 953 aaKnown RBP eCLIP8.28□□□□□ -1.08
CDKAL1-204ENST00000613575 KCTD12Q96CX2 325 aaKnown RBP8.28□□□□□ -1.08
CDKAL1-204ENST00000613575 FAM217BQ9NTX9 383 aaPredicted RBP8.28□□□□□ -1.08
CDKAL1-204ENST00000613575 DIP2BQ9P265 1576 aa8.28□□□□□ -1.08
CDKAL1-204ENST00000613575 RRP7AQ9Y3A4 280 aaKnown RBP8.28□□□□□ -1.08
CDKAL1-204ENST00000613575 RIMS2Q9UQ26 1411 aa8.27□□□□□ -1.08
CDKAL1-204ENST00000613575 DIAPH1O60610 1272 aaKnown RBP8.27□□□□□ -1.08
CDKAL1-204ENST00000613575 C8orf34Q49A92 452 aa8.27□□□□□ -1.08
CDKAL1-204ENST00000613575 ZMYM3Q14202 1370 aa8.27□□□□□ -1.09
CDKAL1-204ENST00000613575 CPSF1Q10570 1443 aaKnown RBP8.27□□□□□ -1.09
CDKAL1-204ENST00000613575 WASLO00401 505 aaPredicted RBP8.27□□□□□ -1.09
CDKAL1-204ENST00000613575 BCAMP50895 628 aa8.27□□□□□ -1.09
CDKAL1-204ENST00000613575 PMFBP1Q8TBY8 1022 aa8.27□□□□□ -1.09
CDKAL1-204ENST00000613575 PANK1Q8TE04 598 aa8.27□□□□□ -1.09
CDKAL1-204ENST00000613575 TSPYL1Q9H0U9 437 aa8.27□□□□□ -1.09
CDKAL1-204ENST00000613575 POLKQ9UBT6 870 aa8.27□□□□□ -1.09
CDKAL1-204ENST00000613575 MED1Q15648 1581 aaPredicted RBP8.26□□□□□ -1.09
CDKAL1-204ENST00000613575 CLTCQ00610 1675 aaKnown RBP8.26□□□□□ -1.09
CDKAL1-204ENST00000613575 FAM135BQ49AJ0 1406 aa8.26□□□□□ -1.09
CDKAL1-204ENST00000613575 ZSCAN20P17040 1043 aaPredicted RBP8.26□□□□□ -1.09
CDKAL1-204ENST00000613575 OS9Q13438 667 aaPredicted RBP8.26□□□□□ -1.09
CDKAL1-204ENST00000613575 WAPLQ7Z5K2 1190 aa8.26□□□□□ -1.09
CDKAL1-204ENST00000613575 ZNF428Q96B54 188 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms