RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 PHAXQ9H814 394 aaKnown RBP15.51■□□□□ 0.07
PCDHGA4-202ENST00000612927 EIF2S2P20042 333 aaKnown RBP15.5■□□□□ 0.07
PCDHGA4-202ENST00000612927 RAB3GAP1Q15042 981 aa15.5■□□□□ 0.07
PCDHGA4-202ENST00000612927 CABLES1Q8TDN4 633 aa15.5■□□□□ 0.07
PCDHGA4-202ENST00000612927 NPHP3Q7Z494 1330 aa15.5■□□□□ 0.07
PCDHGA4-202ENST00000612927 TNS3Q68CZ2 1445 aa15.49■□□□□ 0.07
PCDHGA4-202ENST00000612927 CACNA1FO60840 1977 aa15.49■□□□□ 0.07
PCDHGA4-202ENST00000612927 GNAI2P04899 355 aa15.49■□□□□ 0.07
PCDHGA4-202ENST00000612927 N4BP2Q86UW6 1770 aaPredicted RBP15.49■□□□□ 0.07
PCDHGA4-202ENST00000612927 OVOS2A0A0G2JMS6 1433 aa15.48■□□□□ 0.07
PCDHGA4-202ENST00000612927 XIRP1Q702N8 1843 aaKnown RBP15.48■□□□□ 0.07
PCDHGA4-202ENST00000612927 PXDNLA1KZ92 1463 aa15.48■□□□□ 0.07
PCDHGA4-202ENST00000612927 HSP90AB1P08238 724 aaKnown RBP15.48■□□□□ 0.07
PCDHGA4-202ENST00000612927 ANP32BQ92688 251 aaKnown RBP15.48■□□□□ 0.07
PCDHGA4-202ENST00000612927 COL18A1P39060 1754 aa15.48■□□□□ 0.07
PCDHGA4-202ENST00000612927 HOXB7P09629 217 aa15.48■□□□□ 0.07
PCDHGA4-202ENST00000612927 SDSP20132 328 aa15.48■□□□□ 0.07
PCDHGA4-202ENST00000612927 FOXD4L1Q9NU39 408 aa15.48■□□□□ 0.07
PCDHGA4-202ENST00000612927 CHPF2Q9P2E5 772 aa15.48■□□□□ 0.07
PCDHGA4-202ENST00000612927 EXOC6BQ9Y2D4 811 aa15.48■□□□□ 0.07
PCDHGA4-202ENST00000612927 HMMRO75330 724 aa15.47■□□□□ 0.07
PCDHGA4-202ENST00000612927 BCL11BQ9C0K0 894 aaPredicted RBP15.47■□□□□ 0.07
PCDHGA4-202ENST00000612927 NLRP2Q9NX02 1062 aa15.47■□□□□ 0.07
PCDHGA4-202ENST00000612927 TSHZ3Q63HK5 1081 aa15.46■□□□□ 0.07
PCDHGA4-202ENST00000612927 GNAI3P08754 354 aa15.46■□□□□ 0.07
PCDHGA4-202ENST00000612927 NASPP49321 788 aaPredicted RBP15.46■□□□□ 0.07
PCDHGA4-202ENST00000612927 CHRNA2Q15822 529 aa15.46■□□□□ 0.07
PCDHGA4-202ENST00000612927 HS1BP3Q53T59 392 aa15.46■□□□□ 0.07
PCDHGA4-202ENST00000612927 SPATA31A3Q5VYP0 1347 aa15.46■□□□□ 0.06
PCDHGA4-202ENST00000612927 CRYBG1Q9Y4K1 1723 aa15.46■□□□□ 0.06
PCDHGA4-202ENST00000612927 LMTK3Q96Q04 1460 aa15.45■□□□□ 0.06
PCDHGA4-202ENST00000612927 PNMA6EA0A0J9YXQ4 647 aa15.45■□□□□ 0.06
PCDHGA4-202ENST00000612927 ANXA1P04083 346 aa15.45■□□□□ 0.06
PCDHGA4-202ENST00000612927 MSNP26038 577 aaKnown RBP15.45■□□□□ 0.06
PCDHGA4-202ENST00000612927 ADAMTS7Q9UKP4 1686 aa15.45■□□□□ 0.06
PCDHGA4-202ENST00000612927 SIPA1L3O60292 1781 aaPredicted RBP15.45■□□□□ 0.06
PCDHGA4-202ENST00000612927 MEGF6O75095 1541 aa15.45■□□□□ 0.06
PCDHGA4-202ENST00000612927 STRCQ7RTU9 1775 aa15.44■□□□□ 0.06
PCDHGA4-202ENST00000612927 CLEC17AQ6ZS10 378 aa15.44■□□□□ 0.06
PCDHGA4-202ENST00000612927 RAPGEF4Q8WZA2 1011 aa15.44■□□□□ 0.06
PCDHGA4-202ENST00000612927 USP44Q9H0E7 712 aa15.44■□□□□ 0.06
PCDHGA4-202ENST00000612927 LRRFIP2Q9Y608 721 aaKnown RBP15.44■□□□□ 0.06
PCDHGA4-202ENST00000612927 BRINP3Q76B58 766 aa15.44■□□□□ 0.06
PCDHGA4-202ENST00000612927 KDM4FA0A1W2PPD8 638 aa15.43■□□□□ 0.06
PCDHGA4-202ENST00000612927 GOLGA6L22H0YM25 854 aa15.43■□□□□ 0.06
PCDHGA4-202ENST00000612927 HEG1Q9ULI3 1381 aa15.43■□□□□ 0.06
PCDHGA4-202ENST00000612927 PRAMEF22A3QJZ6 481 aa15.43■□□□□ 0.06
PCDHGA4-202ENST00000612927 K7ELQ4 463 aaPredicted RBP15.43■□□□□ 0.06
PCDHGA4-202ENST00000612927 CSB-PGBD3P0DP91 1061 aa15.43■□□□□ 0.06
PCDHGA4-202ENST00000612927 KDM6AO15550 1401 aaPredicted RBP15.43■□□□□ 0.06
PCDHGA4-202ENST00000612927 GIGYF1O75420 1035 aaPredicted RBP15.42■□□□□ 0.06
PCDHGA4-202ENST00000612927 ATP8B2P98198 1209 aa15.42■□□□□ 0.06
PCDHGA4-202ENST00000612927 MTERF4Q7Z6M4 381 aaKnown RBP15.42■□□□□ 0.06
PCDHGA4-202ENST00000612927 PRDM4Q9UKN5 801 aa15.42■□□□□ 0.06
PCDHGA4-202ENST00000612927 TATP17735 454 aaPredicted RBP15.42■□□□□ 0.06
PCDHGA4-202ENST00000612927 PDE1AP54750 535 aa15.42■□□□□ 0.06
PCDHGA4-202ENST00000612927 UBTFL1P0CB47 393 aaPredicted RBP15.41■□□□□ 0.06
PCDHGA4-202ENST00000612927 KLHL40Q2TBA0 621 aa15.41■□□□□ 0.06
PCDHGA4-202ENST00000612927 USP26Q9BXU7 913 aa15.41■□□□□ 0.06
PCDHGA4-202ENST00000612927 SRCIN1Q9C0H9 1055 aa15.41■□□□□ 0.06
PCDHGA4-202ENST00000612927 ADCY9O60503 1353 aa15.41■□□□□ 0.06
PCDHGA4-202ENST00000612927 PI4KAP2A4QPH2 592 aa15.41■□□□□ 0.06
PCDHGA4-202ENST00000612927 PROSER3Q2NL68 480 aa15.41■□□□□ 0.06
PCDHGA4-202ENST00000612927 PI4KAP1Q8N8J0 262 aa15.41■□□□□ 0.06
PCDHGA4-202ENST00000612927 ZNF335Q9H4Z2 1342 aaPredicted RBP15.41■□□□□ 0.06
PCDHGA4-202ENST00000612927 ABCC6O95255 1503 aa15.41■□□□□ 0.06
PCDHGA4-202ENST00000612927 PHKG2P15735 406 aa15.4■□□□□ 0.06
PCDHGA4-202ENST00000612927 DNAAF4Q8WXU2 420 aa15.4■□□□□ 0.06
PCDHGA4-202ENST00000612927 CHMP4AQ9BY43 222 aa15.4■□□□□ 0.06
PCDHGA4-202ENST00000612927 BEND3Q5T5X7 828 aa15.4■□□□□ 0.06
PCDHGA4-202ENST00000612927 DBF4Q9UBU7 674 aaPredicted RBP15.4■□□□□ 0.06
PCDHGA4-202ENST00000612927 CPDO75976 1380 aa15.4■□□□□ 0.06
PCDHGA4-202ENST00000612927 ZNF500O60304 480 aaPredicted RBP15.4■□□□□ 0.06
PCDHGA4-202ENST00000612927 LRRCC1Q9C099 1032 aa15.4■□□□□ 0.06
PCDHGA4-202ENST00000612927 CASC1Q6TDU7 716 aa15.39■□□□□ 0.05
PCDHGA4-202ENST00000612927 SPG7Q9UQ90 795 aa15.39■□□□□ 0.05
PCDHGA4-202ENST00000612927 SCN11AQ9UI33 1791 aa15.39■□□□□ 0.05
PCDHGA4-202ENST00000612927 SLC39A6Q13433 755 aa15.39■□□□□ 0.05
PCDHGA4-202ENST00000612927 SALL3Q9BXA9 1300 aa15.38■□□□□ 0.05
PCDHGA4-202ENST00000612927 ZNF445P59923 1031 aa15.38■□□□□ 0.05
PCDHGA4-202ENST00000612927 OSBPL3Q9H4L5 887 aa15.38■□□□□ 0.05
PCDHGA4-202ENST00000612927 SLC52A2Q9HAB3 445 aa15.38■□□□□ 0.05
PCDHGA4-202ENST00000612927 NBPF7P0C2Y1 421 aaPredicted RBP15.38■□□□□ 0.05
PCDHGA4-202ENST00000612927 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.38■□□□□ 0.05
PCDHGA4-202ENST00000612927 NOL7Q9UMY1 257 aaKnown RBP15.38■□□□□ 0.05
PCDHGA4-202ENST00000612927 RABEP1Q15276 862 aa15.37■□□□□ 0.05
PCDHGA4-202ENST00000612927 MX1P20591 662 aa15.37■□□□□ 0.05
PCDHGA4-202ENST00000612927 IFNL2Q8IZJ0 200 aa15.37■□□□□ 0.05
PCDHGA4-202ENST00000612927 CYP27B1O15528 508 aa15.36■□□□□ 0.05
PCDHGA4-202ENST00000612927 ZNF790Q6PG37 636 aa15.36■□□□□ 0.05
PCDHGA4-202ENST00000612927 SMAP1Q8IYB5 467 aaPredicted RBP15.36■□□□□ 0.05
PCDHGA4-202ENST00000612927 NFATC2IPQ8NCF5 419 aa15.36■□□□□ 0.05
PCDHGA4-202ENST00000612927 SSH3Q8TE77 659 aa15.36■□□□□ 0.05
PCDHGA4-202ENST00000612927 IL1RAPL2Q9NP60 686 aa15.36■□□□□ 0.05
PCDHGA4-202ENST00000612927 SLAIN2Q9P270 581 aa15.36■□□□□ 0.05
PCDHGA4-202ENST00000612927 C5P01031 1676 aa15.36■□□□□ 0.05
PCDHGA4-202ENST00000612927 AEBP2Q6ZN18 517 aaPredicted RBP15.36■□□□□ 0.05
PCDHGA4-202ENST00000612927 PPP1R42Q7Z4L9 355 aa15.36■□□□□ 0.05
PCDHGA4-202ENST00000612927 MAP3K2Q9Y2U5 619 aa15.36■□□□□ 0.05
PCDHGA4-202ENST00000612927 PKD1L3Q7Z443 1732 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms