RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 TGFB2P61812 414 aa24.17■■□□□ 1.46
VCX3A-203ENST00000612369 NARFQ9UHQ1 456 aa24.17■■□□□ 1.46
VCX3A-203ENST00000612369 KIF13BQ9NQT8 1826 aa24.17■■□□□ 1.46
VCX3A-203ENST00000612369 COL15A1P39059 1388 aa24.16■■□□□ 1.46
VCX3A-203ENST00000612369 FKBP8Q14318 412 aa24.16■■□□□ 1.46
VCX3A-203ENST00000612369 MCM10Q7L590 875 aa24.16■■□□□ 1.46
VCX3A-203ENST00000612369 PLEKHF1Q96S99 279 aa24.16■■□□□ 1.46
VCX3A-203ENST00000612369 C10orf71Q711Q0 1435 aa24.15■■□□□ 1.46
VCX3A-203ENST00000612369 A0A087WZG4 1122 aa24.14■■□□□ 1.45
VCX3A-203ENST00000612369 CANXP27824 592 aaKnown RBP24.14■■□□□ 1.45
VCX3A-203ENST00000612369 ZEB1P37275 1124 aaPredicted RBP24.14■■□□□ 1.45
VCX3A-203ENST00000612369 EIF5P55010 431 aaKnown RBP24.14■■□□□ 1.45
VCX3A-203ENST00000612369 USPL1Q5W0Q7 1092 aa24.14■■□□□ 1.45
VCX3A-203ENST00000612369 MYBBP1AQ9BQG0 1328 aaKnown RBP24.13■■□□□ 1.45
VCX3A-203ENST00000612369 TM4SF1P30408 202 aa24.13■■□□□ 1.45
VCX3A-203ENST00000612369 DCTN1Q14203 1278 aa24.12■■□□□ 1.45
VCX3A-203ENST00000612369 TAF7Q15545 349 aaPredicted RBP24.12■■□□□ 1.45
VCX3A-203ENST00000612369 ZNF784Q8NCA9 323 aaPredicted RBP24.12■■□□□ 1.45
VCX3A-203ENST00000612369 MAPK8IP3Q9UPT6 1336 aa24.11■■□□□ 1.45
VCX3A-203ENST00000612369 KCNQ3O43525 872 aa24.11■■□□□ 1.45
VCX3A-203ENST00000612369 IL6STP40189 918 aaPredicted RBP24.11■■□□□ 1.45
VCX3A-203ENST00000612369 NFE2L2Q16236 605 aa24.11■■□□□ 1.45
VCX3A-203ENST00000612369 PXDNLA1KZ92 1463 aa24.11■■□□□ 1.45
VCX3A-203ENST00000612369 DDR1Q08345 913 aa24.1■■□□□ 1.45
VCX3A-203ENST00000612369 POLRMTO00411 1230 aaKnown RBP24.09■■□□□ 1.45
VCX3A-203ENST00000612369 SNRPA1P09661 255 aaKnown RBP24.09■■□□□ 1.45
VCX3A-203ENST00000612369 DLG5Q8TDM6 1919 aa24.08■■□□□ 1.45
VCX3A-203ENST00000612369 KIAA1551Q9HCM1 1747 aa24.08■■□□□ 1.45
VCX3A-203ENST00000612369 NPM2Q86SE8 214 aaKnown RBP24.08■■□□□ 1.45
VCX3A-203ENST00000612369 PNISRQ8TF01 805 aaKnown RBP24.08■■□□□ 1.45
VCX3A-203ENST00000612369 BCL2L12Q9HB09 334 aa24.07■■□□□ 1.44
VCX3A-203ENST00000612369 A0A0G2JLW4 131 aa24.06■■□□□ 1.44
VCX3A-203ENST00000612369 A1BGP04217 495 aa24.06■■□□□ 1.44
VCX3A-203ENST00000612369 NFIXQ14938 502 aa24.06■■□□□ 1.44
VCX3A-203ENST00000612369 USP16Q9Y5T5 823 aa24.06■■□□□ 1.44
VCX3A-203ENST00000612369 DPEP1P16444 411 aa24.05■■□□□ 1.44
VCX3A-203ENST00000612369 N4BP2Q86UW6 1770 aaPredicted RBP24.05■■□□□ 1.44
VCX3A-203ENST00000612369 PRKRIP1Q9H875 184 aaPredicted RBP24.03■■□□□ 1.44
VCX3A-203ENST00000612369 WWC3Q9ULE0 1092 aa24.03■■□□□ 1.44
VCX3A-203ENST00000612369 ZNF330Q9Y3S2 320 aaPredicted RBP24.03■■□□□ 1.44
VCX3A-203ENST00000612369 BCS1LQ9Y276 419 aa24.02■■□□□ 1.44
VCX3A-203ENST00000612369 SERPINB2P05120 415 aa24.01■■□□□ 1.43
VCX3A-203ENST00000612369 KCNA3P22001 575 aa24.01■■□□□ 1.43
VCX3A-203ENST00000612369 PIM2Q9P1W9 311 aa24.01■■□□□ 1.43
VCX3A-203ENST00000612369 TBC1D2BQ9UPU7 963 aa24.01■■□□□ 1.43
VCX3A-203ENST00000612369 NRXN2Q9P2S2 1712 aa24.01■■□□□ 1.43
VCX3A-203ENST00000612369 PRAMEF22A3QJZ6 481 aa24■■□□□ 1.43
VCX3A-203ENST00000612369 MIS18AQ9NYP9 233 aa24■■□□□ 1.43
VCX3A-203ENST00000612369 SCN7AQ01118 1682 aa23.99■■□□□ 1.43
VCX3A-203ENST00000612369 AFDNP55196 1824 aaKnown RBP23.99■■□□□ 1.43
VCX3A-203ENST00000612369 BRCA1P38398 1863 aaKnown RBP23.99■■□□□ 1.43
VCX3A-203ENST00000612369 RIPK4P57078 832 aa23.99■■□□□ 1.43
VCX3A-203ENST00000612369 LMOD3Q0VAK6 560 aa23.99■■□□□ 1.43
VCX3A-203ENST00000612369 WDR43Q15061 677 aaKnown RBP eCLIP23.99■■□□□ 1.43
VCX3A-203ENST00000612369 KDM3BQ7LBC6 1761 aa23.98■■□□□ 1.43
VCX3A-203ENST00000612369 DZIP3Q86Y13 1208 aaKnown RBP23.98■■□□□ 1.43
VCX3A-203ENST00000612369 CAMTA2O94983 1202 aa23.97■■□□□ 1.43
VCX3A-203ENST00000612369 TMPOP42166 694 aaKnown RBP23.97■■□□□ 1.43
VCX3A-203ENST00000612369 TBC1D9BQ66K14 1250 aa23.97■■□□□ 1.43
VCX3A-203ENST00000612369 RGL2O15211 777 aa23.96■■□□□ 1.43
VCX3A-203ENST00000612369 EIF4A1P60842 406 aaKnown RBP23.96■■□□□ 1.43
VCX3A-203ENST00000612369 DALRD3Q5D0E6 543 aaKnown RBP23.96■■□□□ 1.43
VCX3A-203ENST00000612369 CLEC4GQ6UXB4 293 aa23.96■■□□□ 1.43
VCX3A-203ENST00000612369 BICDL1Q6ZP65 573 aa23.96■■□□□ 1.43
VCX3A-203ENST00000612369 THUMPD2Q9BTF0 503 aaKnown RBP23.96■■□□□ 1.43
VCX3A-203ENST00000612369 BABAM1Q9NWV8 329 aa23.96■■□□□ 1.43
VCX3A-203ENST00000612369 CARMIL3Q8ND23 1372 aa23.95■■□□□ 1.42
VCX3A-203ENST00000612369 GIGYF1O75420 1035 aaPredicted RBP23.95■■□□□ 1.42
VCX3A-203ENST00000612369 RUNDC1Q96C34 613 aa23.95■■□□□ 1.42
VCX3A-203ENST00000612369 SETDB2Q96T68 719 aa23.95■■□□□ 1.42
VCX3A-203ENST00000612369 NBPF26B4DH59 902 aa23.94■■□□□ 1.42
VCX3A-203ENST00000612369 CHRNA5P30532 468 aa23.94■■□□□ 1.42
VCX3A-203ENST00000612369 NBPF10Q6P3W6 841 aaKnown RBP23.94■■□□□ 1.42
VCX3A-203ENST00000612369 NBPF15Q8N660 670 aa23.94■■□□□ 1.42
VCX3A-203ENST00000612369 ZNF652Q9Y2D9 606 aa23.94■■□□□ 1.42
VCX3A-203ENST00000612369 ARFGEF1Q9Y6D6 1849 aa23.94■■□□□ 1.42
VCX3A-203ENST00000612369 LAMB4A4D0S4 1761 aa23.93■■□□□ 1.42
VCX3A-203ENST00000612369 ADCY9O60503 1353 aa23.93■■□□□ 1.42
VCX3A-203ENST00000612369 PIP4K2AP48426 406 aaPredicted RBP23.93■■□□□ 1.42
VCX3A-203ENST00000612369 PDZRN3Q9UPQ7 1066 aa23.93■■□□□ 1.42
VCX3A-203ENST00000612369 BCORQ6W2J9 1755 aa23.93■■□□□ 1.42
VCX3A-203ENST00000612369 ARHGAP27Q6ZUM4 889 aa23.92■■□□□ 1.42
VCX3A-203ENST00000612369 TSPYL4Q9UJ04 414 aa23.92■■□□□ 1.42
VCX3A-203ENST00000612369 ADAMTS8Q9UP79 889 aa23.92■■□□□ 1.42
VCX3A-203ENST00000612369 ATP10DQ9P241 1426 aa23.92■■□□□ 1.42
VCX3A-203ENST00000612369 CCDC146Q8IYE0 955 aa23.91■■□□□ 1.42
VCX3A-203ENST00000612369 H0YIN7 160 aa23.9■■□□□ 1.42
VCX3A-203ENST00000612369 BRIP1Q9BX63 1249 aa23.9■■□□□ 1.42
VCX3A-203ENST00000612369 PDE6BP35913 854 aa23.89■■□□□ 1.41
VCX3A-203ENST00000612369 PRR5LQ6MZQ0 368 aa23.89■■□□□ 1.41
VCX3A-203ENST00000612369 C2CD5Q86YS7 1000 aa23.88■■□□□ 1.41
VCX3A-203ENST00000612369 RRP7AQ9Y3A4 280 aaKnown RBP23.88■■□□□ 1.41
VCX3A-203ENST00000612369 ERBB4Q15303 1308 aa23.87■■□□□ 1.41
VCX3A-203ENST00000612369 NEUROD2Q15784 382 aa23.87■■□□□ 1.41
VCX3A-203ENST00000612369 CNBD1Q8NA66 436 aa23.87■■□□□ 1.41
VCX3A-203ENST00000612369 DLEC1Q9Y238 1755 aa23.87■■□□□ 1.41
VCX3A-203ENST00000612369 NPHP1O15259 732 aa23.86■■□□□ 1.41
VCX3A-203ENST00000612369 ST5P78524 1137 aa23.86■■□□□ 1.41
VCX3A-203ENST00000612369 TTLL6Q8N841 843 aa23.86■■□□□ 1.41
VCX3A-203ENST00000612369 GPBP1L1Q9HC44 474 aaPredicted RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms