RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 RC3H1Q5TC82 1133 aaKnown RBP10.29□□□□□ -0.76
PTCHD3P1-201ENST00000612350 DPY19L2Q6NUT2 758 aa10.29□□□□□ -0.76
PTCHD3P1-201ENST00000612350 EDC4Q6P2E9 1401 aaKnown RBP10.29□□□□□ -0.76
PTCHD3P1-201ENST00000612350 RASSF10A6NK89 507 aa10.28□□□□□ -0.76
PTCHD3P1-201ENST00000612350 NFKBIEO00221 500 aa10.28□□□□□ -0.76
PTCHD3P1-201ENST00000612350 RPS6KA4O75676 772 aa10.28□□□□□ -0.76
PTCHD3P1-201ENST00000612350 ITGBL1O95965 494 aaPredicted RBP10.28□□□□□ -0.76
PTCHD3P1-201ENST00000612350 RFC4P35249 363 aa10.28□□□□□ -0.76
PTCHD3P1-201ENST00000612350 MAP2K1Q02750 393 aaPredicted RBP10.28□□□□□ -0.76
PTCHD3P1-201ENST00000612350 SLC4A9Q96Q91 983 aa10.28□□□□□ -0.76
PTCHD3P1-201ENST00000612350 SLC12A5Q9H2X9 1139 aa10.28□□□□□ -0.76
PTCHD3P1-201ENST00000612350 ATG3Q9NT62 314 aa10.28□□□□□ -0.76
PTCHD3P1-201ENST00000612350 MYH14Q7Z406 1995 aaKnown RBP10.27□□□□□ -0.77
PTCHD3P1-201ENST00000612350 FKBP8Q14318 412 aa10.27□□□□□ -0.77
PTCHD3P1-201ENST00000612350 HDGFL2Q7Z4V5 671 aaPredicted RBP10.27□□□□□ -0.77
PTCHD3P1-201ENST00000612350 KDRP35968 1356 aa10.26□□□□□ -0.77
PTCHD3P1-201ENST00000612350 CLCN6P51797 869 aa10.26□□□□□ -0.77
PTCHD3P1-201ENST00000612350 DEFB115Q30KQ5 88 aa10.26□□□□□ -0.77
PTCHD3P1-201ENST00000612350 TMOD3Q9NYL9 352 aa10.26□□□□□ -0.77
PTCHD3P1-201ENST00000612350 DICER1Q9UPY3 1922 aaKnown RBP10.26□□□□□ -0.77
PTCHD3P1-201ENST00000612350 CNTNAP4Q9C0A0 1308 aa10.26□□□□□ -0.77
PTCHD3P1-201ENST00000612350 WDR33Q9C0J8 1336 aaKnown RBP10.26□□□□□ -0.77
PTCHD3P1-201ENST00000612350 POLRMTO00411 1230 aaKnown RBP10.25□□□□□ -0.77
PTCHD3P1-201ENST00000612350 TM4SF1P30408 202 aa10.25□□□□□ -0.77
PTCHD3P1-201ENST00000612350 LDHDQ86WU2 507 aa10.25□□□□□ -0.77
PTCHD3P1-201ENST00000612350 SRP68Q9UHB9 627 aaKnown RBP10.25□□□□□ -0.77
PTCHD3P1-201ENST00000612350 A0A1W2PP64 1363 aa10.25□□□□□ -0.77
PTCHD3P1-201ENST00000612350 RTL1A6NKG5 1358 aa10.25□□□□□ -0.77
PTCHD3P1-201ENST00000612350 ZNF831Q5JPB2 1677 aa10.25□□□□□ -0.77
PTCHD3P1-201ENST00000612350 DDNO94850 711 aaPredicted RBP10.24□□□□□ -0.77
PTCHD3P1-201ENST00000612350 TMC1Q8TDI8 760 aa10.24□□□□□ -0.77
PTCHD3P1-201ENST00000612350 CFAP44Q96MT7 982 aa10.24□□□□□ -0.77
PTCHD3P1-201ENST00000612350 MCOLN1Q9GZU1 580 aa10.24□□□□□ -0.77
PTCHD3P1-201ENST00000612350 COL5A3P25940 1745 aaPredicted RBP10.24□□□□□ -0.77
PTCHD3P1-201ENST00000612350 RRS1Q15050 365 aaKnown RBP10.23□□□□□ -0.77
PTCHD3P1-201ENST00000612350 ERFEQ4G0M1 354 aa10.23□□□□□ -0.77
PTCHD3P1-201ENST00000612350 TTLL6Q8N841 843 aa10.23□□□□□ -0.77
PTCHD3P1-201ENST00000612350 COG3Q96JB2 828 aa10.23□□□□□ -0.77
PTCHD3P1-201ENST00000612350 USP42Q9H9J4 1324 aaKnown RBP10.23□□□□□ -0.77
PTCHD3P1-201ENST00000612350 DLEC1Q9Y238 1755 aa10.23□□□□□ -0.77
PTCHD3P1-201ENST00000612350 HSP90AB2PQ58FF8 381 aa10.22□□□□□ -0.77
PTCHD3P1-201ENST00000612350 PRPF38BQ5VTL8 546 aaKnown RBP10.22□□□□□ -0.77
PTCHD3P1-201ENST00000612350 TAF1DQ9H5J8 278 aaPredicted RBP10.22□□□□□ -0.77
PTCHD3P1-201ENST00000612350 TERF2IPQ9NYB0 399 aa10.22□□□□□ -0.77
PTCHD3P1-201ENST00000612350 CASP8AP2Q9UKL3 1982 aa10.22□□□□□ -0.77
PTCHD3P1-201ENST00000612350 SMG6Q86US8 1419 aaKnown RBP10.22□□□□□ -0.77
PTCHD3P1-201ENST00000612350 THSD7BQ9C0I4 1608 aa10.22□□□□□ -0.77
PTCHD3P1-201ENST00000612350 INSRP06213 1382 aa10.21□□□□□ -0.78
PTCHD3P1-201ENST00000612350 SCN4AP35499 1836 aa10.21□□□□□ -0.78
PTCHD3P1-201ENST00000612350 AFDNP55196 1824 aaKnown RBP10.21□□□□□ -0.78
PTCHD3P1-201ENST00000612350 FER1L6Q2WGJ9 1857 aa10.21□□□□□ -0.78
PTCHD3P1-201ENST00000612350 TNRC18O15417 2968 aaPredicted RBP10.2□□□□□ -0.78
PTCHD3P1-201ENST00000612350 ADAMTSL1Q8N6G6 1762 aa10.2□□□□□ -0.78
PTCHD3P1-201ENST00000612350 L3MBTL3Q96JM7 780 aaPredicted RBP10.2□□□□□ -0.78
PTCHD3P1-201ENST00000612350 TSKSQ9UJT2 592 aa10.2□□□□□ -0.78
PTCHD3P1-201ENST00000612350 SPG7Q9UQ90 795 aa10.2□□□□□ -0.78
PTCHD3P1-201ENST00000612350 NRXN2Q9P2S2 1712 aa10.19□□□□□ -0.78
PTCHD3P1-201ENST00000612350 ADAMTS7Q9UKP4 1686 aa10.19□□□□□ -0.78
PTCHD3P1-201ENST00000612350 NCAPD2Q15021 1401 aa10.19□□□□□ -0.78
PTCHD3P1-201ENST00000612350 IQCA1LA6NCM1 817 aa10.19□□□□□ -0.78
PTCHD3P1-201ENST00000612350 PHKG2P15735 406 aa10.19□□□□□ -0.78
PTCHD3P1-201ENST00000612350 BEGAINQ9BUH8 593 aa10.19□□□□□ -0.78
PTCHD3P1-201ENST00000612350 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.19□□□□□ -0.78
PTCHD3P1-201ENST00000612350 CRKLP46109 303 aaKnown RBP10.18□□□□□ -0.78
PTCHD3P1-201ENST00000612350 C2CD5Q86YS7 1000 aa10.18□□□□□ -0.78
PTCHD3P1-201ENST00000612350 CNTROBQ8N137 903 aa10.18□□□□□ -0.78
PTCHD3P1-201ENST00000612350 CAPNS2Q96L46 248 aa10.18□□□□□ -0.78
PTCHD3P1-201ENST00000612350 GPR101Q96P66 508 aaPredicted RBP10.18□□□□□ -0.78
PTCHD3P1-201ENST00000612350 LTBP1Q14766 1721 aa10.18□□□□□ -0.78
PTCHD3P1-201ENST00000612350 LTBP3Q9NS15 1303 aa10.17□□□□□ -0.78
PTCHD3P1-201ENST00000612350 DGKZQ13574 1117 aa10.17□□□□□ -0.78
PTCHD3P1-201ENST00000612350 NFIXQ14938 502 aa10.17□□□□□ -0.78
PTCHD3P1-201ENST00000612350 MAP1SQ66K74 1059 aaPredicted RBP10.17□□□□□ -0.78
PTCHD3P1-201ENST00000612350 IFNL2Q8IZJ0 200 aa10.17□□□□□ -0.78
PTCHD3P1-201ENST00000612350 ABT1Q9ULW3 272 aaKnown RBP10.17□□□□□ -0.78
PTCHD3P1-201ENST00000612350 TONSLQ96HA7 1378 aa10.16□□□□□ -0.78
PTCHD3P1-201ENST00000612350 H0YIN7 160 aa10.16□□□□□ -0.78
PTCHD3P1-201ENST00000612350 C21orf2O43822 256 aa10.16□□□□□ -0.78
PTCHD3P1-201ENST00000612350 ECE1P42892 770 aa10.16□□□□□ -0.78
PTCHD3P1-201ENST00000612350 EAPPQ56P03 285 aaPredicted RBP10.16□□□□□ -0.78
PTCHD3P1-201ENST00000612350 USPL1Q5W0Q7 1092 aa10.16□□□□□ -0.78
PTCHD3P1-201ENST00000612350 INTS5Q6P9B9 1019 aaKnown RBP10.16□□□□□ -0.78
PTCHD3P1-201ENST00000612350 ZNF579Q8NAF0 562 aaKnown RBP10.16□□□□□ -0.78
PTCHD3P1-201ENST00000612350 L3MBTL2Q969R5 705 aa10.16□□□□□ -0.78
PTCHD3P1-201ENST00000612350 PUS7Q96PZ0 661 aaKnown RBP10.16□□□□□ -0.78
PTCHD3P1-201ENST00000612350 ROCK2O75116 1388 aaKnown RBP10.15□□□□□ -0.78
PTCHD3P1-201ENST00000612350 FLT4P35916 1363 aa10.15□□□□□ -0.78
PTCHD3P1-201ENST00000612350 CARMIL3Q8ND23 1372 aa10.15□□□□□ -0.78
PTCHD3P1-201ENST00000612350 ERVV-2B6SEH9 535 aa10.15□□□□□ -0.78
PTCHD3P1-201ENST00000612350 FYB1O15117 783 aa10.15□□□□□ -0.78
PTCHD3P1-201ENST00000612350 SERPINB2P05120 415 aa10.15□□□□□ -0.78
PTCHD3P1-201ENST00000612350 MAP2K2P36507 400 aa10.15□□□□□ -0.78
PTCHD3P1-201ENST00000612350 SOX10P56693 466 aa10.15□□□□□ -0.78
PTCHD3P1-201ENST00000612350 CYP4F22Q6NT55 531 aa10.15□□□□□ -0.78
PTCHD3P1-201ENST00000612350 TAOK3Q9H2K8 898 aa10.15□□□□□ -0.78
PTCHD3P1-201ENST00000612350 KIF24Q5T7B8 1368 aa10.14□□□□□ -0.79
PTCHD3P1-201ENST00000612350 EPHX2P34913 555 aa10.14□□□□□ -0.79
PTCHD3P1-201ENST00000612350 FMR1Q06787 632 aaKnown RBP eCLIP10.14□□□□□ -0.79
PTCHD3P1-201ENST00000612350 GGNBP2Q9H3C7 697 aa10.14□□□□□ -0.79
PTCHD3P1-201ENST00000612350 BCL2L12Q9HB09 334 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms