RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 COL15A1P39059 1388 aa23.91■■□□□ 1.42
SSBP1-215ENST00000612337 TTC5Q8N0Z6 440 aa23.9■■□□□ 1.42
SSBP1-215ENST00000612337 PIM2Q9P1W9 311 aa23.9■■□□□ 1.42
SSBP1-215ENST00000612337 NARFQ9UHQ1 456 aa23.9■■□□□ 1.42
SSBP1-215ENST00000612337 ARFGEF1Q9Y6D6 1849 aa23.89■■□□□ 1.42
SSBP1-215ENST00000612337 ARHGAP27Q6ZUM4 889 aa23.89■■□□□ 1.41
SSBP1-215ENST00000612337 IL17REQ8NFR9 667 aa23.89■■□□□ 1.41
SSBP1-215ENST00000612337 TEFQ10587 303 aa23.88■■□□□ 1.41
SSBP1-215ENST00000612337 STARD3NLO95772 234 aa23.87■■□□□ 1.41
SSBP1-215ENST00000612337 CFAP53Q96M91 514 aa23.87■■□□□ 1.41
SSBP1-215ENST00000612337 SIPA1L3O60292 1781 aaPredicted RBP23.87■■□□□ 1.41
SSBP1-215ENST00000612337 DALRD3Q5D0E6 543 aaKnown RBP23.86■■□□□ 1.41
SSBP1-215ENST00000612337 ZNF790Q6PG37 636 aa23.86■■□□□ 1.41
SSBP1-215ENST00000612337 NFIXQ14938 502 aa23.85■■□□□ 1.41
SSBP1-215ENST00000612337 ZNF496Q96IT1 587 aaPredicted RBP23.85■■□□□ 1.41
SSBP1-215ENST00000612337 CEMIPQ8WUJ3 1361 aa23.84■■□□□ 1.41
SSBP1-215ENST00000612337 HEG1Q9ULI3 1381 aa23.84■■□□□ 1.41
SSBP1-215ENST00000612337 CANXP27824 592 aaKnown RBP23.84■■□□□ 1.41
SSBP1-215ENST00000612337 CHRNA5P30532 468 aa23.84■■□□□ 1.41
SSBP1-215ENST00000612337 RSPH6AQ9H0K4 717 aa23.84■■□□□ 1.41
SSBP1-215ENST00000612337 BCL2L12Q9HB09 334 aa23.84■■□□□ 1.41
SSBP1-215ENST00000612337 AFDNP55196 1824 aaKnown RBP23.84■■□□□ 1.41
SSBP1-215ENST00000612337 KIF3CO14782 793 aa23.83■■□□□ 1.41
SSBP1-215ENST00000612337 PRKAR2BP31323 418 aa23.83■■□□□ 1.41
SSBP1-215ENST00000612337 EIF5P55010 431 aaKnown RBP23.83■■□□□ 1.41
SSBP1-215ENST00000612337 PHACTR3Q96KR7 559 aa23.83■■□□□ 1.41
SSBP1-215ENST00000612337 TEX13AQ9BXU3 409 aaPredicted RBP23.83■■□□□ 1.41
SSBP1-215ENST00000612337 NUDCQ9Y266 331 aa23.83■■□□□ 1.41
SSBP1-215ENST00000612337 NRXN2Q9P2S2 1712 aa23.83■■□□□ 1.41
SSBP1-215ENST00000612337 A0A087WZG4 1122 aa23.82■■□□□ 1.4
SSBP1-215ENST00000612337 SERPINB2P05120 415 aa23.8■■□□□ 1.4
SSBP1-215ENST00000612337 PPP2R1AP30153 589 aa23.8■■□□□ 1.4
SSBP1-215ENST00000612337 FMNL2Q96PY5 1086 aa23.8■■□□□ 1.4
SSBP1-215ENST00000612337 HSPA6P17066 643 aa23.79■■□□□ 1.4
SSBP1-215ENST00000612337 C9orf131Q5VYM1 1079 aa23.79■■□□□ 1.4
SSBP1-215ENST00000612337 BTBD11A6QL63 1104 aa23.77■■□□□ 1.4
SSBP1-215ENST00000612337 U2AF1L5P0DN76 240 aaPredicted RBP23.77■■□□□ 1.4
SSBP1-215ENST00000612337 U2AF1Q01081 240 aaKnown RBP eCLIP23.77■■□□□ 1.41e-7■■■■■ 28.2
SSBP1-215ENST00000612337 IL6STP40189 918 aaPredicted RBP23.76■■□□□ 1.39
SSBP1-215ENST00000612337 DLEC1Q9Y238 1755 aa23.75■■□□□ 1.39
SSBP1-215ENST00000612337 SCN7AQ01118 1682 aa23.75■■□□□ 1.39
SSBP1-215ENST00000612337 KCNQ3O43525 872 aa23.74■■□□□ 1.39
SSBP1-215ENST00000612337 BICDL1Q6ZP65 573 aa23.74■■□□□ 1.39
SSBP1-215ENST00000612337 SBF1O95248 1867 aa23.73■■□□□ 1.39
SSBP1-215ENST00000612337 A1BGP04217 495 aa23.73■■□□□ 1.39
SSBP1-215ENST00000612337 TBC1D9BQ66K14 1250 aa23.73■■□□□ 1.39
SSBP1-215ENST00000612337 RTF1Q92541 710 aaKnown RBP23.73■■□□□ 1.39
SSBP1-215ENST00000612337 NMRK2Q9NPI5 230 aa23.73■■□□□ 1.39
SSBP1-215ENST00000612337 RNF181Q9P0P0 153 aa23.73■■□□□ 1.39
SSBP1-215ENST00000612337 TBC1D2BQ9UPU7 963 aa23.73■■□□□ 1.39
SSBP1-215ENST00000612337 ZNF330Q9Y3S2 320 aaPredicted RBP23.73■■□□□ 1.39
SSBP1-215ENST00000612337 CARMIL3Q8ND23 1372 aa23.73■■□□□ 1.39
SSBP1-215ENST00000612337 TOMM70O94826 608 aa23.72■■□□□ 1.39
SSBP1-215ENST00000612337 NPM2Q86SE8 214 aaKnown RBP23.71■■□□□ 1.39
SSBP1-215ENST00000612337 C2CD5Q86YS7 1000 aa23.71■■□□□ 1.39
SSBP1-215ENST00000612337 TTLL6Q8N841 843 aa23.71■■□□□ 1.39
SSBP1-215ENST00000612337 H0YIN7 160 aa23.7■■□□□ 1.38
SSBP1-215ENST00000612337 HTATSF1O43719 755 aaKnown RBP23.7■■□□□ 1.38
SSBP1-215ENST00000612337 MCM10Q7L590 875 aa23.7■■□□□ 1.38
SSBP1-215ENST00000612337 KDM2BQ8NHM5 1336 aa23.68■■□□□ 1.38
SSBP1-215ENST00000612337 CAMTA2O94983 1202 aa23.68■■□□□ 1.38
SSBP1-215ENST00000612337 PDZRN3Q9UPQ7 1066 aa23.68■■□□□ 1.38
SSBP1-215ENST00000612337 USP16Q9Y5T5 823 aa23.68■■□□□ 1.38
SSBP1-215ENST00000612337 ANKRD31Q8N7Z5 1873 aa23.68■■□□□ 1.38
SSBP1-215ENST00000612337 SNRPA1P09661 255 aaKnown RBP23.67■■□□□ 1.38
SSBP1-215ENST00000612337 PRR5LQ6MZQ0 368 aa23.67■■□□□ 1.38
SSBP1-215ENST00000612337 BRIP1Q9BX63 1249 aa23.67■■□□□ 1.38
SSBP1-215ENST00000612337 ZC3H4Q9UPT8 1303 aaKnown RBP23.66■■□□□ 1.38
SSBP1-215ENST00000612337 BCORQ6W2J9 1755 aa23.66■■□□□ 1.38
SSBP1-215ENST00000612337 PDE6BP35913 854 aa23.66■■□□□ 1.38
SSBP1-215ENST00000612337 RASSF7Q02833 373 aa23.66■■□□□ 1.38
SSBP1-215ENST00000612337 DCTN1Q14203 1278 aa23.66■■□□□ 1.38
SSBP1-215ENST00000612337 SETDB2Q96T68 719 aa23.66■■□□□ 1.38
SSBP1-215ENST00000612337 PRAMEF22A3QJZ6 481 aa23.65■■□□□ 1.38
SSBP1-215ENST00000612337 LMNB1P20700 586 aa23.65■■□□□ 1.38
SSBP1-215ENST00000612337 DZIP3Q86Y13 1208 aaKnown RBP23.65■■□□□ 1.38
SSBP1-215ENST00000612337 RBM46Q8TBY0 533 aaKnown RBP23.65■■□□□ 1.38
SSBP1-215ENST00000612337 APLP1P51693 650 aa23.64■■□□□ 1.37
SSBP1-215ENST00000612337 C16orf71Q8IYS4 520 aaPredicted RBP23.64■■□□□ 1.37
SSBP1-215ENST00000612337 PIP4K2AP48426 406 aaPredicted RBP23.63■■□□□ 1.37
SSBP1-215ENST00000612337 CNBD1Q8NA66 436 aa23.63■■□□□ 1.37
SSBP1-215ENST00000612337 TNRC6CQ9HCJ0 1690 aaKnown RBP23.63■■□□□ 1.37
SSBP1-215ENST00000612337 COL11A2P13942 1736 aaPredicted RBP23.62■■□□□ 1.37
SSBP1-215ENST00000612337 PRELPP51888 382 aa23.62■■□□□ 1.37
SSBP1-215ENST00000612337 TAF7Q15545 349 aaPredicted RBP23.62■■□□□ 1.37
SSBP1-215ENST00000612337 CLEC4GQ6UXB4 293 aa23.62■■□□□ 1.37
SSBP1-215ENST00000612337 CCDC24Q8N4L8 307 aa23.62■■□□□ 1.37
SSBP1-215ENST00000612337 ZNF622Q969S3 477 aaKnown RBP eCLIP23.62■■□□□ 1.37
SSBP1-215ENST00000612337 NFKBIEO00221 500 aa23.61■■□□□ 1.37
SSBP1-215ENST00000612337 NEFMP07197 916 aa23.61■■□□□ 1.37
SSBP1-215ENST00000612337 RRAGCQ9HB90 399 aa23.61■■□□□ 1.37
SSBP1-215ENST00000612337 NPHP1O15259 732 aa23.6■■□□□ 1.37
SSBP1-215ENST00000612337 ST5P78524 1137 aa23.6■■□□□ 1.37
SSBP1-215ENST00000612337 ZNF652Q9Y2D9 606 aa23.59■■□□□ 1.37
SSBP1-215ENST00000612337 CCDC88AQ3V6T2 1871 aa23.59■■□□□ 1.37
SSBP1-215ENST00000612337 DLG5Q8TDM6 1919 aa23.59■■□□□ 1.37
SSBP1-215ENST00000612337 NBPF26B4DH59 902 aa23.58■■□□□ 1.37
SSBP1-215ENST00000612337 RGL2O15211 777 aa23.58■■□□□ 1.37
SSBP1-215ENST00000612337 FSTL1Q12841 308 aa23.58■■□□□ 1.37
SSBP1-215ENST00000612337 NBPF10Q6P3W6 841 aaKnown RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms