RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 MCM4P33991 863 aa11.06□□□□□ -0.64
SRGAP2B-204ENST00000612199 LRRFIP2Q9Y608 721 aaKnown RBP11.06□□□□□ -0.64
SRGAP2B-204ENST00000612199 STK38Q15208 465 aa11.06□□□□□ -0.64
SRGAP2B-204ENST00000612199 GOLGA6L10A0A0M3HER8 536 aa11.06□□□□□ -0.64
SRGAP2B-204ENST00000612199 GOLGA6L10A6NI86 522 aa11.06□□□□□ -0.64
SRGAP2B-204ENST00000612199 LARP1BQ659C4 914 aaKnown RBP11.06□□□□□ -0.64
SRGAP2B-204ENST00000612199 GNL3LQ9NVN8 582 aaKnown RBP11.06□□□□□ -0.64
SRGAP2B-204ENST00000612199 PPP1R12AO14974 1030 aaPredicted RBP11.06□□□□□ -0.64
SRGAP2B-204ENST00000612199 KRT85P78386 507 aa11.06□□□□□ -0.64
SRGAP2B-204ENST00000612199 DHX8Q14562 1220 aaKnown RBP11.06□□□□□ -0.64
SRGAP2B-204ENST00000612199 CHRNA2Q15822 529 aa11.06□□□□□ -0.64
SRGAP2B-204ENST00000612199 ABCF2Q9UG63 623 aa11.06□□□□□ -0.64
SRGAP2B-204ENST00000612199 MX1P20591 662 aa11.05□□□□□ -0.64
SRGAP2B-204ENST00000612199 TANGO6Q9C0B7 1094 aa11.05□□□□□ -0.64
SRGAP2B-204ENST00000612199 CCDC8Q9H0W5 538 aaPredicted RBP11.05□□□□□ -0.64
SRGAP2B-204ENST00000612199 TBC1D12O60347 775 aa11.05□□□□□ -0.64
SRGAP2B-204ENST00000612199 USP5P45974 858 aa11.05□□□□□ -0.64
SRGAP2B-204ENST00000612199 STAMBPO95630 424 aa11.05□□□□□ -0.64
SRGAP2B-204ENST00000612199 TMOD3Q9NYL9 352 aa11.05□□□□□ -0.64
SRGAP2B-204ENST00000612199 ZRANB1Q9UGI0 708 aa11.05□□□□□ -0.64
SRGAP2B-204ENST00000612199 KDM5BQ9UGL1 1544 aa11.05□□□□□ -0.64
SRGAP2B-204ENST00000612199 CCDC192P0DO97 292 aa11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 TSHZ3Q63HK5 1081 aa11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 IFNLR1Q8IU57 520 aaPredicted RBP11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 DNAI2Q9GZS0 605 aa11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 MBIPQ9NS73 344 aa11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 PDRG1Q9NUG6 133 aa11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 NUP153P49790 1475 aaKnown RBP11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 CASTP20810 708 aaKnown RBP11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 KRT32Q14532 448 aa11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 CCDC89Q8N998 374 aa11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 DDX11Q96FC9 970 aa11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 ZBTB24O43167 697 aaPredicted RBP11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 JARID2Q92833 1246 aaPredicted RBP11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 STARD3NLO95772 234 aa11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 ME1P48163 572 aa11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 SPC24Q8NBT2 197 aa11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 KIF1BPQ96EK5 621 aa11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 SLC3A2P08195 630 aaKnown RBP11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 PIP4K2AP48426 406 aaPredicted RBP11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 OTUD6BQ8N6M0 293 aa11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 NACAP1Q9BZK3 213 aa11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 ACBD3Q9H3P7 528 aa11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 RAI14Q9P0K7 980 aa11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 SSBP05455 408 aaKnown RBP eCLIP11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 LARP6Q9BRS8 491 aaKnown RBP11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 LRP2BPQ9P2M1 347 aa11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 MAPKBP1O60336 1514 aa11.04□□□□□ -0.64
SRGAP2B-204ENST00000612199 METTL24Q5JXM2 366 aa11.03□□□□□ -0.64
SRGAP2B-204ENST00000612199 KRT28Q7Z3Y7 464 aa11.03□□□□□ -0.64
SRGAP2B-204ENST00000612199 FERMT3Q86UX7 667 aa11.03□□□□□ -0.64
SRGAP2B-204ENST00000612199 PRPF31Q8WWY3 499 aaKnown RBP11.03□□□□□ -0.64
SRGAP2B-204ENST00000612199 TDO2P48775 406 aa11.03□□□□□ -0.64
SRGAP2B-204ENST00000612199 GTF3C6Q969F1 213 aa11.03□□□□□ -0.64
SRGAP2B-204ENST00000612199 ZBTB3Q9H5J0 574 aa11.03□□□□□ -0.64
SRGAP2B-204ENST00000612199 IGHDP01880 384 aa11.03□□□□□ -0.64
SRGAP2B-204ENST00000612199 ZSCAN25Q6NSZ9 544 aa11.03□□□□□ -0.64
SRGAP2B-204ENST00000612199 LARP1Q6PKG0 1096 aaKnown RBP11.03□□□□□ -0.64
SRGAP2B-204ENST00000612199 APBB1IPQ7Z5R6 666 aaPredicted RBP11.03□□□□□ -0.64
SRGAP2B-204ENST00000612199 PPP6R1Q9UPN7 881 aa11.03□□□□□ -0.64
SRGAP2B-204ENST00000612199 LRPPRCP42704 1394 aaKnown RBP11.03□□□□□ -0.64
SRGAP2B-204ENST00000612199 SMC2O95347 1197 aa11.03□□□□□ -0.64
SRGAP2B-204ENST00000612199 SLU7O95391 586 aaKnown RBP11.03□□□□□ -0.64
SRGAP2B-204ENST00000612199 DNAAF4Q8WXU2 420 aa11.03□□□□□ -0.64
SRGAP2B-204ENST00000612199 CTNNA3Q9UI47 895 aa11.03□□□□□ -0.64
SRGAP2B-204ENST00000612199 CCP110O43303 1012 aa11.02□□□□□ -0.64
SRGAP2B-204ENST00000612199 PPP4R3AQ6IN85 833 aa11.02□□□□□ -0.64
SRGAP2B-204ENST00000612199 RAPGEF6Q8TEU7 1601 aa11.02□□□□□ -0.64
SRGAP2B-204ENST00000612199 SYCP2Q9BX26 1530 aa11.02□□□□□ -0.64
SRGAP2B-204ENST00000612199 GPTP24298 496 aa11.02□□□□□ -0.64
SRGAP2B-204ENST00000612199 TRIM22Q8IYM9 498 aa11.02□□□□□ -0.64
SRGAP2B-204ENST00000612199 TIGD1Q96MW7 591 aa11.02□□□□□ -0.64
SRGAP2B-204ENST00000612199 ATP5J2-PTCD1G3V325 749 aa11.02□□□□□ -0.65
SRGAP2B-204ENST00000612199 SPOUT1Q5T280 376 aaKnown RBP11.02□□□□□ -0.65
SRGAP2B-204ENST00000612199 PRPF40BQ6NWY9 871 aaKnown RBP11.02□□□□□ -0.65
SRGAP2B-204ENST00000612199 GRPEL1Q9HAV7 217 aa11.02□□□□□ -0.65
SRGAP2B-204ENST00000612199 NSD2O96028 1365 aa11.02□□□□□ -0.65
SRGAP2B-204ENST00000612199 AMOTQ4VCS5 1084 aa11.02□□□□□ -0.65
SRGAP2B-204ENST00000612199 ZNF652Q9Y2D9 606 aa11.02□□□□□ -0.65
SRGAP2B-204ENST00000612199 MRVI1Q9Y6F6 885 aa11.02□□□□□ -0.65
SRGAP2B-204ENST00000612199 ZNHIT6Q9NWK9 470 aaKnown RBP11.02□□□□□ -0.65
SRGAP2B-204ENST00000612199 CCDC69A6NI79 296 aa11.02□□□□□ -0.65
SRGAP2B-204ENST00000612199 TMCO5BA8MYB1 307 aa11.02□□□□□ -0.65
SRGAP2B-204ENST00000612199 TXLNAP40222 546 aa11.02□□□□□ -0.65
SRGAP2B-204ENST00000612199 PPP1R9BQ96SB3 815 aa11.02□□□□□ -0.65
SRGAP2B-204ENST00000612199 UGGT2Q9NYU1 1516 aa11.01□□□□□ -0.65
SRGAP2B-204ENST00000612199 HSP90B2PQ58FF3 399 aa11.01□□□□□ -0.65
SRGAP2B-204ENST00000612199 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.01□□□□□ -0.65
SRGAP2B-204ENST00000612199 ASXL2Q76L83 1435 aa11.01□□□□□ -0.65
SRGAP2B-204ENST00000612199 FILIP1LQ4L180 1135 aa11.01□□□□□ -0.65
SRGAP2B-204ENST00000612199 NOC2LQ9Y3T9 749 aaKnown RBP11.01□□□□□ -0.65
SRGAP2B-204ENST00000612199 TRAPPC8Q9Y2L5 1435 aa11.01□□□□□ -0.65
SRGAP2B-204ENST00000612199 A0A087WZG4 1122 aa11.01□□□□□ -0.65
SRGAP2B-204ENST00000612199 GLRX3O76003 335 aaKnown RBP11.01□□□□□ -0.65
SRGAP2B-204ENST00000612199 PPM1EQ8WY54 764 aa11.01□□□□□ -0.65
SRGAP2B-204ENST00000612199 ZNF408Q9H9D4 720 aa11.01□□□□□ -0.65
SRGAP2B-204ENST00000612199 PI4KAP2A4QPH2 592 aa11.01□□□□□ -0.65
SRGAP2B-204ENST00000612199 PI4KAP1Q8N8J0 262 aa11.01□□□□□ -0.65
SRGAP2B-204ENST00000612199 PLCH2O75038 1416 aa11.01□□□□□ -0.65
SRGAP2B-204ENST00000612199 DBF4Q9UBU7 674 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms