RNA–Protein interactions for RNA: ENST00000612093.1

CSPG4P10-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

TSL 2 BASIC

Gene CSPG4P10, Length 3,411 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-202ENST00000612093 INTS3Q68E01 1043 aaKnown RBP13.84□□□□□ -0.19
CSPG4P10-202ENST00000612093 TOM1O60784 492 aa13.84□□□□□ -0.19
CSPG4P10-202ENST00000612093 DCAF5Q96JK2 942 aa13.84□□□□□ -0.19
CSPG4P10-202ENST00000612093 UBAP1LF5GYI3 381 aa13.84□□□□□ -0.19
CSPG4P10-202ENST00000612093 VSIG10Q8N0Z9 540 aa13.84□□□□□ -0.19
CSPG4P10-202ENST00000612093 SCN11AQ9UI33 1791 aa13.84□□□□□ -0.19
CSPG4P10-202ENST00000612093 PHLPP1O60346 1717 aa13.83□□□□□ -0.2
CSPG4P10-202ENST00000612093 PKD1L3Q7Z443 1732 aa13.83□□□□□ -0.2
CSPG4P10-202ENST00000612093 GIGYF1O75420 1035 aaPredicted RBP13.83□□□□□ -0.2
CSPG4P10-202ENST00000612093 ZNF790Q6PG37 636 aa13.83□□□□□ -0.2
CSPG4P10-202ENST00000612093 MEIS3Q99687 375 aa13.83□□□□□ -0.2
CSPG4P10-202ENST00000612093 CD2BP2O95400 341 aaKnown RBP13.83□□□□□ -0.2
CSPG4P10-202ENST00000612093 HDAC1Q13547 482 aaPredicted RBP13.83□□□□□ -0.2
CSPG4P10-202ENST00000612093 SIPA1L3O60292 1781 aaPredicted RBP13.82□□□□□ -0.2
CSPG4P10-202ENST00000612093 ADAMTS7Q9UKP4 1686 aa13.82□□□□□ -0.2
CSPG4P10-202ENST00000612093 PCDH11XQ9BZA7 1347 aa13.82□□□□□ -0.2
CSPG4P10-202ENST00000612093 PCDH11YQ9BZA8 1340 aa13.82□□□□□ -0.2
CSPG4P10-202ENST00000612093 CABP4P57796 275 aa13.82□□□□□ -0.2
CSPG4P10-202ENST00000612093 SOS1Q07889 1333 aaPredicted RBP13.82□□□□□ -0.2
CSPG4P10-202ENST00000612093 PROSER3Q2NL68 480 aa13.81□□□□□ -0.2
CSPG4P10-202ENST00000612093 TSHZ3Q63HK5 1081 aa13.81□□□□□ -0.2
CSPG4P10-202ENST00000612093 SIRT2Q8IXJ6 389 aa13.81□□□□□ -0.2
CSPG4P10-202ENST00000612093 PARP4Q9UKK3 1724 aaKnown RBP13.81□□□□□ -0.2
CSPG4P10-202ENST00000612093 C16orf71Q8IYS4 520 aaPredicted RBP13.81□□□□□ -0.2
CSPG4P10-202ENST00000612093 ZNF496Q96IT1 587 aaPredicted RBP13.81□□□□□ -0.2
CSPG4P10-202ENST00000612093 CHMP4BQ9H444 224 aaKnown RBP13.81□□□□□ -0.2
CSPG4P10-202ENST00000612093 COL16A1Q07092 1604 aaPredicted RBP13.81□□□□□ -0.2
CSPG4P10-202ENST00000612093 HOXB7P09629 217 aa13.8□□□□□ -0.2
CSPG4P10-202ENST00000612093 L1TD1Q5T7N2 865 aaKnown RBP13.8□□□□□ -0.2
CSPG4P10-202ENST00000612093 SMARCA5O60264 1052 aaPredicted RBP13.8□□□□□ -0.2
CSPG4P10-202ENST00000612093 TTC5Q8N0Z6 440 aa13.79□□□□□ -0.2
CSPG4P10-202ENST00000612093 SSFA2P28290 1259 aa13.79□□□□□ -0.2
CSPG4P10-202ENST00000612093 FAM43AQ8N2R8 423 aa13.79□□□□□ -0.2
CSPG4P10-202ENST00000612093 CHMP5Q9NZZ3 219 aa13.79□□□□□ -0.2
CSPG4P10-202ENST00000612093 HEG1Q9ULI3 1381 aa13.79□□□□□ -0.2
CSPG4P10-202ENST00000612093 COL22A1Q8NFW1 1626 aaPredicted RBP13.79□□□□□ -0.2
CSPG4P10-202ENST00000612093 PIP4K2AP48426 406 aaPredicted RBP13.78□□□□□ -0.2
CSPG4P10-202ENST00000612093 CCT4P50991 539 aaKnown RBP13.78□□□□□ -0.2
CSPG4P10-202ENST00000612093 RBM10P98175 930 aaKnown RBP13.78□□□□□ -0.2
CSPG4P10-202ENST00000612093 BCL11BQ9C0K0 894 aaPredicted RBP13.78□□□□□ -0.2
CSPG4P10-202ENST00000612093 COL14A1Q05707 1796 aaKnown RBP13.78□□□□□ -0.2
CSPG4P10-202ENST00000612093 SMC5Q8IY18 1101 aa13.78□□□□□ -0.2
CSPG4P10-202ENST00000612093 TNPO1Q92973 898 aaKnown RBP13.78□□□□□ -0.2
CSPG4P10-202ENST00000612093 ANTXR1Q9H6X2 564 aa13.78□□□□□ -0.2
CSPG4P10-202ENST00000612093 CACNA1FO60840 1977 aa13.78□□□□□ -0.2
CSPG4P10-202ENST00000612093 AEBP2Q6ZN18 517 aaPredicted RBP13.78□□□□□ -0.2
CSPG4P10-202ENST00000612093 DBF4Q9UBU7 674 aaPredicted RBP13.78□□□□□ -0.2
CSPG4P10-202ENST00000612093 KAT6BQ8WYB5 2073 aa13.78□□□□□ -0.2
CSPG4P10-202ENST00000612093 PI4KAP2A4QPH2 592 aa13.77□□□□□ -0.2
CSPG4P10-202ENST00000612093 PI4KAP1Q8N8J0 262 aa13.77□□□□□ -0.2
CSPG4P10-202ENST00000612093 AIMP1Q12904 312 aaKnown RBP13.77□□□□□ -0.21
CSPG4P10-202ENST00000612093 GAS2L3Q86XJ1 694 aa13.77□□□□□ -0.21
CSPG4P10-202ENST00000612093 RNF214Q8ND24 703 aa13.77□□□□□ -0.21
CSPG4P10-202ENST00000612093 DDX49Q9Y6V7 483 aaKnown RBP13.77□□□□□ -0.21
CSPG4P10-202ENST00000612093 MCTP1Q6DN14 999 aa13.77□□□□□ -0.21
CSPG4P10-202ENST00000612093 MRC1P22897 1456 aa13.76□□□□□ -0.21
CSPG4P10-202ENST00000612093 PLEKHG2Q9H7P9 1386 aa13.76□□□□□ -0.21
CSPG4P10-202ENST00000612093 MYL6BP14649 208 aa13.76□□□□□ -0.21
CSPG4P10-202ENST00000612093 PLCB2Q00722 1185 aa13.76□□□□□ -0.21
CSPG4P10-202ENST00000612093 OTUD7AQ8TE49 926 aaPredicted RBP13.76□□□□□ -0.21
CSPG4P10-202ENST00000612093 USP16Q9Y5T5 823 aa13.76□□□□□ -0.21
CSPG4P10-202ENST00000612093 SHANK3Q9BYB0 1731 aa13.76□□□□□ -0.21
CSPG4P10-202ENST00000612093 ATP10DQ9P241 1426 aa13.76□□□□□ -0.21
CSPG4P10-202ENST00000612093 GRPEL1Q9HAV7 217 aa13.76□□□□□ -0.21
CSPG4P10-202ENST00000612093 C5P01031 1676 aa13.75□□□□□ -0.21
CSPG4P10-202ENST00000612093 PTCD1O75127 700 aaKnown RBP13.75□□□□□ -0.21
CSPG4P10-202ENST00000612093 CEP85Q6P2H3 762 aa13.75□□□□□ -0.21
CSPG4P10-202ENST00000612093 FMNL2Q96PY5 1086 aa13.75□□□□□ -0.21
CSPG4P10-202ENST00000612093 LARP6Q9BRS8 491 aaKnown RBP13.75□□□□□ -0.21
CSPG4P10-202ENST00000612093 PKP1Q13835 747 aa13.74□□□□□ -0.21
CSPG4P10-202ENST00000612093 CCDC9Q9Y3X0 531 aaKnown RBP13.74□□□□□ -0.21
CSPG4P10-202ENST00000612093 PDIA6Q15084 440 aa13.74□□□□□ -0.21
CSPG4P10-202ENST00000612093 DNAAF4Q8WXU2 420 aa13.74□□□□□ -0.21
CSPG4P10-202ENST00000612093 ADCY9O60503 1353 aa13.74□□□□□ -0.21
CSPG4P10-202ENST00000612093 SNRPA1P09661 255 aaKnown RBP13.74□□□□□ -0.21
CSPG4P10-202ENST00000612093 NKX1-1Q15270 411 aaPredicted RBP13.74□□□□□ -0.21
CSPG4P10-202ENST00000612093 CAVIN1Q6NZI2 390 aaKnown RBP13.74□□□□□ -0.21
CSPG4P10-202ENST00000612093 ANKRD44Q8N8A2 993 aa13.74□□□□□ -0.21
CSPG4P10-202ENST00000612093 CHMP4AQ9BY43 222 aa13.74□□□□□ -0.21
CSPG4P10-202ENST00000612093 ERVV-2B6SEH9 535 aa13.73□□□□□ -0.21
CSPG4P10-202ENST00000612093 NUCB1Q02818 461 aa13.73□□□□□ -0.21
CSPG4P10-202ENST00000612093 MAP3K2Q9Y2U5 619 aa13.73□□□□□ -0.21
CSPG4P10-202ENST00000612093 PLCH1Q4KWH8 1693 aa13.73□□□□□ -0.21
CSPG4P10-202ENST00000612093 CHD1LQ86WJ1 897 aa13.73□□□□□ -0.21
CSPG4P10-202ENST00000612093 SRCIN1Q9C0H9 1055 aa13.73□□□□□ -0.21
CSPG4P10-202ENST00000612093 DDX21Q9NR30 783 aaKnown RBP eCLIP13.73□□□□□ -0.21
CSPG4P10-202ENST00000612093 USP44Q9H0E7 712 aa13.73□□□□□ -0.21
CSPG4P10-202ENST00000612093 RBM27Q9P2N5 1060 aaKnown RBP13.73□□□□□ -0.21
CSPG4P10-202ENST00000612093 ERBB4Q15303 1308 aa13.72□□□□□ -0.21
CSPG4P10-202ENST00000612093 GNAI2P04899 355 aa13.72□□□□□ -0.21
CSPG4P10-202ENST00000612093 HYPKQ9NX55 129 aa13.72□□□□□ -0.21
CSPG4P10-202ENST00000612093 LRRFIP2Q9Y608 721 aaKnown RBP13.72□□□□□ -0.21
CSPG4P10-202ENST00000612093 HSP90AA2PQ14568 343 aaPredicted RBP13.72□□□□□ -0.21
CSPG4P10-202ENST00000612093 GCC1Q96CN9 775 aa13.72□□□□□ -0.21
CSPG4P10-202ENST00000612093 DISP2A7MBM2 1401 aa13.72□□□□□ -0.21
CSPG4P10-202ENST00000612093 BEND3Q5T5X7 828 aa13.71□□□□□ -0.21
CSPG4P10-202ENST00000612093 RPAP2Q8IXW5 612 aaPredicted RBP13.71□□□□□ -0.21
CSPG4P10-202ENST00000612093 TMOD3Q9NYL9 352 aa13.71□□□□□ -0.21
CSPG4P10-202ENST00000612093 A0A0G2JS52 829 aa13.71□□□□□ -0.21
CSPG4P10-202ENST00000612093 C8orf37Q96NL8 207 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms