RNA–Protein interactions for RNA: ENST00000612011.1

PVT1-221, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 169 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-221ENST00000612011 STK31Q9BXU1 1019 aa13.02□□□□□ -0.33
PVT1-221ENST00000612011 BCL11BQ9C0K0 894 aaPredicted RBP13.02□□□□□ -0.33
PVT1-221ENST00000612011 VSIG10Q8N0Z9 540 aa13.01□□□□□ -0.33
PVT1-221ENST00000612011 CHMP4AQ9BY43 222 aa13.01□□□□□ -0.33
PVT1-221ENST00000612011 KIF16BQ96L93 1317 aa13□□□□□ -0.33
PVT1-221ENST00000612011 CANXP27824 592 aaKnown RBP13□□□□□ -0.33
PVT1-221ENST00000612011 RRP1P56182 461 aaKnown RBP13□□□□□ -0.33
PVT1-221ENST00000612011 MRPL50Q8N5N7 158 aaKnown RBP13□□□□□ -0.33
PVT1-221ENST00000612011 GOLGA6L2Q8N9W4 650 aaPredicted RBP13□□□□□ -0.33
PVT1-221ENST00000612011 RNF123Q5XPI4 1314 aa12.99□□□□□ -0.33
PVT1-221ENST00000612011 LOC102724428A0A0B4J2F2 783 aa12.99□□□□□ -0.33
PVT1-221ENST00000612011 SIK1P57059 783 aa12.99□□□□□ -0.33
PVT1-221ENST00000612011 DNAJC10Q8IXB1 793 aa12.99□□□□□ -0.33
PVT1-221ENST00000612011 FRAT1Q92837 279 aaPredicted RBP12.99□□□□□ -0.33
PVT1-221ENST00000612011 SLC4A9Q96Q91 983 aa12.99□□□□□ -0.33
PVT1-221ENST00000612011 CHPF2Q9P2E5 772 aa12.99□□□□□ -0.33
PVT1-221ENST00000612011 USP16Q9Y5T5 823 aa12.99□□□□□ -0.33
PVT1-221ENST00000612011 CASZ1Q86V15 1759 aa12.99□□□□□ -0.33
PVT1-221ENST00000612011 QSER1Q2KHR3 1735 aa12.99□□□□□ -0.33
PVT1-221ENST00000612011 SCN7AQ01118 1682 aa12.99□□□□□ -0.33
PVT1-221ENST00000612011 ATP6V1AP38606 617 aa12.98□□□□□ -0.33
PVT1-221ENST00000612011 TEX13AQ9BXU3 409 aaPredicted RBP12.98□□□□□ -0.33
PVT1-221ENST00000612011 ERBB4Q15303 1308 aa12.97□□□□□ -0.33
PVT1-221ENST00000612011 PLIN1O60240 522 aa12.97□□□□□ -0.33
PVT1-221ENST00000612011 SLC4A2P04920 1241 aa12.97□□□□□ -0.33
PVT1-221ENST00000612011 BRPF1P55201 1214 aaPredicted RBP12.97□□□□□ -0.33
PVT1-221ENST00000612011 DBF4Q9UBU7 674 aaPredicted RBP12.97□□□□□ -0.33
PVT1-221ENST00000612011 ANXA1P04083 346 aa12.96□□□□□ -0.33
PVT1-221ENST00000612011 NEFLP07196 543 aa12.96□□□□□ -0.33
PVT1-221ENST00000612011 ZKSCAN2Q63HK3 967 aa12.96□□□□□ -0.33
PVT1-221ENST00000612011 DDX21Q9NR30 783 aaKnown RBP eCLIP12.96□□□□□ -0.33
PVT1-221ENST00000612011 CCNL1Q9UK58 526 aaPredicted RBP12.96□□□□□ -0.33
PVT1-221ENST00000612011 NOB1Q9ULX3 412 aaKnown RBP12.96□□□□□ -0.33
PVT1-221ENST00000612011 IPO8O15397 1037 aaKnown RBP12.95□□□□□ -0.34
PVT1-221ENST00000612011 STARD3NLO95772 234 aa12.95□□□□□ -0.34
PVT1-221ENST00000612011 CYP19A1P11511 503 aaPredicted RBP12.95□□□□□ -0.34
PVT1-221ENST00000612011 MYL6BP14649 208 aa12.95□□□□□ -0.34
PVT1-221ENST00000612011 PIP4K2AP48426 406 aaPredicted RBP12.95□□□□□ -0.34
PVT1-221ENST00000612011 ITPK1Q13572 414 aa12.95□□□□□ -0.34
PVT1-221ENST00000612011 PROSER3Q2NL68 480 aa12.95□□□□□ -0.34
PVT1-221ENST00000612011 G2E3Q7L622 706 aa12.95□□□□□ -0.34
PVT1-221ENST00000612011 PXDNLA1KZ92 1463 aa12.95□□□□□ -0.34
PVT1-221ENST00000612011 MYH3P11055 1940 aa12.95□□□□□ -0.34
PVT1-221ENST00000612011 PTPRCP08575 1304 aa12.94□□□□□ -0.34
PVT1-221ENST00000612011 APBA3O96018 575 aa12.94□□□□□ -0.34
PVT1-221ENST00000612011 A1BGP04217 495 aa12.94□□□□□ -0.34
PVT1-221ENST00000612011 KCNQ4P56696 695 aa12.94□□□□□ -0.34
PVT1-221ENST00000612011 IRX6P78412 446 aaPredicted RBP12.94□□□□□ -0.34
PVT1-221ENST00000612011 FLIIQ13045 1269 aa12.94□□□□□ -0.34
PVT1-221ENST00000612011 PDIA6Q15084 440 aa12.94□□□□□ -0.34
PVT1-221ENST00000612011 PHAXQ9H814 394 aaKnown RBP12.94□□□□□ -0.34
PVT1-221ENST00000612011 HYPKQ9NX55 129 aa12.94□□□□□ -0.34
PVT1-221ENST00000612011 EP400Q96L91 3159 aa12.93□□□□□ -0.34
PVT1-221ENST00000612011 CRKLP46109 303 aaKnown RBP12.93□□□□□ -0.34
PVT1-221ENST00000612011 FKBP5Q13451 457 aaPredicted RBP12.93□□□□□ -0.34
PVT1-221ENST00000612011 ATF7IPQ6VMQ6 1270 aa12.93□□□□□ -0.34
PVT1-221ENST00000612011 LINC00116Q8NCU8 138 aa12.93□□□□□ -0.34
PVT1-221ENST00000612011 CCDC87Q9NVE4 849 aa12.93□□□□□ -0.34
PVT1-221ENST00000612011 TNNQ9UQP3 1299 aa12.93□□□□□ -0.34
PVT1-221ENST00000612011 NBPF26B4DH59 902 aa12.92□□□□□ -0.34
PVT1-221ENST00000612011 PLSCR1O15162 318 aa12.92□□□□□ -0.34
PVT1-221ENST00000612011 MS4A1P11836 297 aa12.92□□□□□ -0.34
PVT1-221ENST00000612011 TRIM27P14373 513 aa12.92□□□□□ -0.34
PVT1-221ENST00000612011 NBPF14Q5TI25 921 aa12.92□□□□□ -0.34
PVT1-221ENST00000612011 NBPF10Q6P3W6 841 aaKnown RBP12.92□□□□□ -0.34
PVT1-221ENST00000612011 FTSJ3Q8IY81 847 aaKnown RBP12.92□□□□□ -0.34
PVT1-221ENST00000612011 NBPF15Q8N660 670 aa12.92□□□□□ -0.34
PVT1-221ENST00000612011 ARHGAP45Q92619 1136 aa12.92□□□□□ -0.34
PVT1-221ENST00000612011 CLUAP1Q96AJ1 413 aa12.92□□□□□ -0.34
PVT1-221ENST00000612011 API5Q9BZZ5 524 aaKnown RBP12.92□□□□□ -0.34
PVT1-221ENST00000612011 ZBTB1Q9Y2K1 713 aa12.92□□□□□ -0.34
PVT1-221ENST00000612011 ZNF330Q9Y3S2 320 aaPredicted RBP12.92□□□□□ -0.34
PVT1-221ENST00000612011 CNTNAP4Q9C0A0 1308 aa12.91□□□□□ -0.34
PVT1-221ENST00000612011 AIMP1Q12904 312 aaKnown RBP12.91□□□□□ -0.34
PVT1-221ENST00000612011 SF3B2Q13435 895 aaKnown RBP12.91□□□□□ -0.34
PVT1-221ENST00000612011 SLC27A3Q5K4L6 730 aa12.91□□□□□ -0.34
PVT1-221ENST00000612011 C20orf194Q5TEA3 1177 aa12.91□□□□□ -0.34
PVT1-221ENST00000612011 DZIP1LQ8IYY4 767 aaKnown RBP12.91□□□□□ -0.34
PVT1-221ENST00000612011 XAGE3Q8WTP9 111 aa12.91□□□□□ -0.34
PVT1-221ENST00000612011 LAMB2P55268 1798 aa12.91□□□□□ -0.34
PVT1-221ENST00000612011 ABCC4O15439 1325 aa12.9□□□□□ -0.34
PVT1-221ENST00000612011 DDX58O95786 925 aaKnown RBP12.9□□□□□ -0.34
PVT1-221ENST00000612011 PDE3AQ14432 1141 aa12.9□□□□□ -0.34
PVT1-221ENST00000612011 TXNRD1Q16881 649 aa12.9□□□□□ -0.34
PVT1-221ENST00000612011 INTS5Q6P9B9 1019 aaKnown RBP12.9□□□□□ -0.34
PVT1-221ENST00000612011 LRP10Q7Z4F1 713 aa12.9□□□□□ -0.34
PVT1-221ENST00000612011 PANK1Q8TE04 598 aa12.9□□□□□ -0.34
PVT1-221ENST00000612011 ADCY9O60503 1353 aa12.9□□□□□ -0.34
PVT1-221ENST00000612011 COL15A1P39059 1388 aa12.9□□□□□ -0.34
PVT1-221ENST00000612011 COL24A1Q17RW2 1714 aa12.9□□□□□ -0.34
PVT1-221ENST00000612011 RLBP1P12271 317 aa12.89□□□□□ -0.35
PVT1-221ENST00000612011 IL6STP40189 918 aaPredicted RBP12.89□□□□□ -0.35
PVT1-221ENST00000612011 COPS6Q7L5N1 327 aa12.89□□□□□ -0.35
PVT1-221ENST00000612011 LRRC4BQ9NT99 713 aa12.89□□□□□ -0.35
PVT1-221ENST00000612011 F6X3S4 739 aa12.88□□□□□ -0.35
PVT1-221ENST00000612011 BAG6P46379 1132 aa12.88□□□□□ -0.35
PVT1-221ENST00000612011 FKBP8Q14318 412 aa12.88□□□□□ -0.35
PVT1-221ENST00000612011 RC3H1Q5TC82 1133 aaKnown RBP12.88□□□□□ -0.35
PVT1-221ENST00000612011 SLC4A10Q6U841 1118 aa12.88□□□□□ -0.35
PVT1-221ENST00000612011 NPM2Q86SE8 214 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms