RNA–Protein interactions for RNA: ENST00000611917.1

FAM228B-207, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 3

Gene FAM228B, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-207ENST00000611917 SOS1Q07889 1333 aaPredicted RBP16.41■□□□□ 0.22
FAM228B-207ENST00000611917 USP42Q9H9J4 1324 aaKnown RBP16.41■□□□□ 0.22
FAM228B-207ENST00000611917 SCN11AQ9UI33 1791 aa16.41■□□□□ 0.22
FAM228B-207ENST00000611917 TAF1LQ8IZX4 1826 aa16.4■□□□□ 0.22
FAM228B-207ENST00000611917 IL6STP40189 918 aaPredicted RBP16.4■□□□□ 0.22
FAM228B-207ENST00000611917 EIF5P55010 431 aaKnown RBP16.4■□□□□ 0.22
FAM228B-207ENST00000611917 FKBP8Q14318 412 aa16.4■□□□□ 0.22
FAM228B-207ENST00000611917 MIS18AQ9NYP9 233 aa16.4■□□□□ 0.22
FAM228B-207ENST00000611917 USP16Q9Y5T5 823 aa16.4■□□□□ 0.22
FAM228B-207ENST00000611917 A1BGP04217 495 aa16.39■□□□□ 0.21
FAM228B-207ENST00000611917 TM4SF1P30408 202 aa16.39■□□□□ 0.21
FAM228B-207ENST00000611917 ADAMTS8Q9UP79 889 aa16.39■□□□□ 0.21
FAM228B-207ENST00000611917 MRC1P22897 1456 aa16.39■□□□□ 0.21
FAM228B-207ENST00000611917 ZNF831Q5JPB2 1677 aa16.39■□□□□ 0.21
FAM228B-207ENST00000611917 TMPOP42166 694 aaKnown RBP16.38■□□□□ 0.21
FAM228B-207ENST00000611917 BABAM1Q9NWV8 329 aa16.38■□□□□ 0.21
FAM228B-207ENST00000611917 ZNF330Q9Y3S2 320 aaPredicted RBP16.38■□□□□ 0.21
FAM228B-207ENST00000611917 NEUROD2Q15784 382 aa16.37■□□□□ 0.21
FAM228B-207ENST00000611917 ANP32CO43423 234 aa16.36■□□□□ 0.21
FAM228B-207ENST00000611917 CCDC146Q8IYE0 955 aa16.35■□□□□ 0.21
FAM228B-207ENST00000611917 TBC1D2BQ9UPU7 963 aa16.35■□□□□ 0.21
FAM228B-207ENST00000611917 COL15A1P39059 1388 aa16.35■□□□□ 0.21
FAM228B-207ENST00000611917 UBR3Q6ZT12 1888 aa16.35■□□□□ 0.21
FAM228B-207ENST00000611917 A0A0G2JLW4 131 aa16.34■□□□□ 0.21
FAM228B-207ENST00000611917 EIF4A1P60842 406 aaKnown RBP16.34■□□□□ 0.21
FAM228B-207ENST00000611917 THUMPD2Q9BTF0 503 aaKnown RBP16.34■□□□□ 0.21
FAM228B-207ENST00000611917 TSPYL4Q9UJ04 414 aa16.34■□□□□ 0.21
FAM228B-207ENST00000611917 TUBGCP6Q96RT7 1819 aa16.33■□□□□ 0.21
FAM228B-207ENST00000611917 SERPINB2P05120 415 aa16.33■□□□□ 0.2
FAM228B-207ENST00000611917 NFIXQ14938 502 aa16.33■□□□□ 0.2
FAM228B-207ENST00000611917 CLEC4GQ6UXB4 293 aa16.33■□□□□ 0.2
FAM228B-207ENST00000611917 SETDB2Q96T68 719 aa16.33■□□□□ 0.2
FAM228B-207ENST00000611917 KCPQ6ZWJ8 1503 aa16.33■□□□□ 0.2
FAM228B-207ENST00000611917 ADAMTS7Q9UKP4 1686 aa16.33■□□□□ 0.2
FAM228B-207ENST00000611917 POLRMTO00411 1230 aaKnown RBP16.32■□□□□ 0.2
FAM228B-207ENST00000611917 GIGYF1O75420 1035 aaPredicted RBP16.32■□□□□ 0.2
FAM228B-207ENST00000611917 YBX3P16989 372 aaKnown RBP eCLIP16.32■□□□□ 0.2
FAM228B-207ENST00000611917 COL24A1Q17RW2 1714 aa16.32■□□□□ 0.2
FAM228B-207ENST00000611917 BICDL1Q6ZP65 573 aa16.32■□□□□ 0.2
FAM228B-207ENST00000611917 DZIP3Q86Y13 1208 aaKnown RBP16.32■□□□□ 0.2
FAM228B-207ENST00000611917 PIM2Q9P1W9 311 aa16.32■□□□□ 0.2
FAM228B-207ENST00000611917 ZNF652Q9Y2D9 606 aa16.32■□□□□ 0.2
FAM228B-207ENST00000611917 RRP7AQ9Y3A4 280 aaKnown RBP16.32■□□□□ 0.2
FAM228B-207ENST00000611917 PRAMEF22A3QJZ6 481 aa16.31■□□□□ 0.2
FAM228B-207ENST00000611917 DPEP1P16444 411 aa16.31■□□□□ 0.2
FAM228B-207ENST00000611917 DDR1Q08345 913 aa16.31■□□□□ 0.2
FAM228B-207ENST00000611917 BCL2L12Q9HB09 334 aa16.31■□□□□ 0.2
FAM228B-207ENST00000611917 NPHP1O15259 732 aa16.3■□□□□ 0.2
FAM228B-207ENST00000611917 PDZRN3Q9UPQ7 1066 aa16.3■□□□□ 0.2
FAM228B-207ENST00000611917 LAS1LQ9Y4W2 734 aaKnown RBP16.3■□□□□ 0.2
FAM228B-207ENST00000611917 MYH14Q7Z406 1995 aaKnown RBP16.29■□□□□ 0.2
FAM228B-207ENST00000611917 CALD1Q05682 793 aaKnown RBP16.29■□□□□ 0.2
FAM228B-207ENST00000611917 BCS1LQ9Y276 419 aa16.29■□□□□ 0.2
FAM228B-207ENST00000611917 RGL2O15211 777 aa16.28■□□□□ 0.2
FAM228B-207ENST00000611917 CAMTA2O94983 1202 aa16.28■□□□□ 0.2
FAM228B-207ENST00000611917 DALRD3Q5D0E6 543 aaKnown RBP16.28■□□□□ 0.2
FAM228B-207ENST00000611917 TBC1D9BQ66K14 1250 aa16.28■□□□□ 0.2
FAM228B-207ENST00000611917 WWC3Q9ULE0 1092 aa16.28■□□□□ 0.2
FAM228B-207ENST00000611917 COL5A3P25940 1745 aaPredicted RBP16.28■□□□□ 0.2
FAM228B-207ENST00000611917 NBPF26B4DH59 902 aa16.27■□□□□ 0.2
FAM228B-207ENST00000611917 H0YIN7 160 aa16.27■□□□□ 0.2
FAM228B-207ENST00000611917 CHL1O00533 1208 aa16.27■□□□□ 0.2
FAM228B-207ENST00000611917 APAF1O14727 1248 aa16.27■□□□□ 0.2
FAM228B-207ENST00000611917 PDE6BP35913 854 aa16.27■□□□□ 0.2
FAM228B-207ENST00000611917 PIP4K2AP48426 406 aaPredicted RBP16.27■□□□□ 0.2
FAM228B-207ENST00000611917 NBPF10Q6P3W6 841 aaKnown RBP16.27■□□□□ 0.2
FAM228B-207ENST00000611917 ARHGAP27Q6ZUM4 889 aa16.27■□□□□ 0.2
FAM228B-207ENST00000611917 NGEFQ8N5V2 710 aa16.27■□□□□ 0.2
FAM228B-207ENST00000611917 NBPF15Q8N660 670 aa16.27■□□□□ 0.2
FAM228B-207ENST00000611917 TRIM35Q9UPQ4 493 aa16.27■□□□□ 0.2
FAM228B-207ENST00000611917 EIF2S2P20042 333 aaKnown RBP16.26■□□□□ 0.19
FAM228B-207ENST00000611917 TPTE2Q6XPS3 522 aa16.26■□□□□ 0.19
FAM228B-207ENST00000611917 BRIP1Q9BX63 1249 aa16.26■□□□□ 0.19
FAM228B-207ENST00000611917 TJP1Q07157 1748 aa16.25■□□□□ 0.19
FAM228B-207ENST00000611917 ERBB4Q15303 1308 aa16.25■□□□□ 0.19
FAM228B-207ENST00000611917 ERVV-1B6SEH8 477 aa16.25■□□□□ 0.19
FAM228B-207ENST00000611917 KCNA3P22001 575 aa16.25■□□□□ 0.19
FAM228B-207ENST00000611917 ST5P78524 1137 aa16.25■□□□□ 0.19
FAM228B-207ENST00000611917 KIF6Q6ZMV9 814 aa16.25■□□□□ 0.19
FAM228B-207ENST00000611917 ZNF784Q8NCA9 323 aaPredicted RBP16.25■□□□□ 0.19
FAM228B-207ENST00000611917 CFAP44Q96MT7 982 aa16.25■□□□□ 0.19
FAM228B-207ENST00000611917 CHMP4AQ9BY43 222 aa16.25■□□□□ 0.19
FAM228B-207ENST00000611917 CICQ96RK0 1608 aaPredicted RBP16.24■□□□□ 0.19
FAM228B-207ENST00000611917 MYL6BP14649 208 aa16.24■□□□□ 0.19
FAM228B-207ENST00000611917 GTF2E1P29083 439 aaPredicted RBP16.24■□□□□ 0.19
FAM228B-207ENST00000611917 CHRNA5P30532 468 aa16.24■□□□□ 0.19
FAM228B-207ENST00000611917 C2CD5Q86YS7 1000 aa16.24■□□□□ 0.19
FAM228B-207ENST00000611917 MRS2Q9HD23 443 aa16.24■□□□□ 0.19
FAM228B-207ENST00000611917 C10orf71Q711Q0 1435 aa16.23■□□□□ 0.19
FAM228B-207ENST00000611917 GNAI1P63096 354 aa16.23■□□□□ 0.19
FAM228B-207ENST00000611917 NBPF5PQ86XG9 351 aaPredicted RBP16.23■□□□□ 0.19
FAM228B-207ENST00000611917 TTLL6Q8N841 843 aa16.23■□□□□ 0.19
FAM228B-207ENST00000611917 NIP7Q9Y221 180 aaKnown RBP eCLIP16.23■□□□□ 0.19
FAM228B-207ENST00000611917 CNBD1Q8NA66 436 aa16.22■□□□□ 0.19
FAM228B-207ENST00000611917 CARMIL3Q8ND23 1372 aa16.22■□□□□ 0.19
FAM228B-207ENST00000611917 PRR5LQ6MZQ0 368 aa16.21■□□□□ 0.19
FAM228B-207ENST00000611917 ZNF622Q969S3 477 aaKnown RBP eCLIP16.21■□□□□ 0.19
FAM228B-207ENST00000611917 SIPA1L3O60292 1781 aaPredicted RBP16.21■□□□□ 0.18
FAM228B-207ENST00000611917 UBR2Q8IWV8 1755 aa16.21■□□□□ 0.18
FAM228B-207ENST00000611917 VIRMAQ69YN4 1812 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms