RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 TUBGCP6Q96RT7 1819 aa29.27■■■□□ 2.28
HOXA4-204ENST00000610970 PI4KAP2A4QPH2 592 aa29.26■■■□□ 2.27
HOXA4-204ENST00000610970 ERC2O15083 957 aa29.26■■■□□ 2.27
HOXA4-204ENST00000610970 PI4KAP1Q8N8J0 262 aa29.26■■■□□ 2.27
HOXA4-204ENST00000610970 SPRYD3Q8NCJ5 442 aa29.26■■■□□ 2.27
HOXA4-204ENST00000610970 HYPKQ9NX55 129 aa29.26■■■□□ 2.27
HOXA4-204ENST00000610970 SPG7Q9UQ90 795 aa29.26■■■□□ 2.27
HOXA4-204ENST00000610970 CRYBG1Q9Y4K1 1723 aa29.26■■■□□ 2.27
HOXA4-204ENST00000610970 TATP17735 454 aaPredicted RBP29.25■■■□□ 2.27
HOXA4-204ENST00000610970 ZC3H6P61129 1189 aaKnown RBP29.25■■■□□ 2.27
HOXA4-204ENST00000610970 SCN11AQ9UI33 1791 aa29.25■■■□□ 2.27
HOXA4-204ENST00000610970 HSP90AB4PQ58FF6 505 aa29.25■■■□□ 2.27
HOXA4-204ENST00000610970 ADCY9O60503 1353 aa29.24■■■□□ 2.27
HOXA4-204ENST00000610970 MCM4P33991 863 aa29.23■■■□□ 2.27
HOXA4-204ENST00000610970 KSR2Q6VAB6 950 aa29.23■■■□□ 2.27
HOXA4-204ENST00000610970 PPP1R42Q7Z4L9 355 aa29.23■■■□□ 2.27
HOXA4-204ENST00000610970 NLRP2Q9NX02 1062 aa29.22■■■□□ 2.27
HOXA4-204ENST00000610970 CPDO75976 1380 aa29.21■■■□□ 2.27
HOXA4-204ENST00000610970 PLEKHG5O94827 1062 aa29.21■■■□□ 2.27
HOXA4-204ENST00000610970 BCL11AQ9H165 835 aa29.21■■■□□ 2.27
HOXA4-204ENST00000610970 MTX1Q13505 466 aa29.2■■■□□ 2.27
HOXA4-204ENST00000610970 SPATA31A3Q5VYP0 1347 aa29.2■■■□□ 2.26
HOXA4-204ENST00000610970 DDX58O95786 925 aaKnown RBP29.2■■■□□ 2.26
HOXA4-204ENST00000610970 EPB41L2O43491 1005 aaKnown RBP29.19■■■□□ 2.26
HOXA4-204ENST00000610970 KIF1BPQ96EK5 621 aa29.19■■■□□ 2.26
HOXA4-204ENST00000610970 SLC52A2Q9HAB3 445 aa29.19■■■□□ 2.26
HOXA4-204ENST00000610970 DDX21Q9NR30 783 aaKnown RBP eCLIP29.19■■■□□ 2.26
HOXA4-204ENST00000610970 HSP90AA1P07900 732 aaKnown RBP29.18■■■□□ 2.26
HOXA4-204ENST00000610970 PHKG2P15735 406 aa29.18■■■□□ 2.26
HOXA4-204ENST00000610970 IFNL2Q8IZJ0 200 aa29.18■■■□□ 2.26
HOXA4-204ENST00000610970 UBAP1LF5GYI3 381 aa29.17■■■□□ 2.26
HOXA4-204ENST00000610970 SURF6O75683 361 aaKnown RBP29.17■■■□□ 2.26
HOXA4-204ENST00000610970 IL27Q8NEV9 243 aa29.17■■■□□ 2.26
HOXA4-204ENST00000610970 DDX11L8A8MPP1 907 aa29.17■■■□□ 2.26
HOXA4-204ENST00000610970 SRGAP3O43295 1099 aa29.17■■■□□ 2.26
HOXA4-204ENST00000610970 NBPF7P0C2Y1 421 aaPredicted RBP29.17■■■□□ 2.26
HOXA4-204ENST00000610970 RBM42Q9BTD8 480 aaKnown RBP29.16■■■□□ 2.26
HOXA4-204ENST00000610970 MAP3K2Q9Y2U5 619 aa29.16■■■□□ 2.26
HOXA4-204ENST00000610970 MRC1P22897 1456 aa29.15■■■□□ 2.26
HOXA4-204ENST00000610970 KDM6AO15550 1401 aaPredicted RBP29.15■■■□□ 2.26
HOXA4-204ENST00000610970 PTMSP20962 102 aa29.15■■■□□ 2.26
HOXA4-204ENST00000610970 ZNF790Q6PG37 636 aa29.15■■■□□ 2.26
HOXA4-204ENST00000610970 PKD1L3Q7Z443 1732 aa29.15■■■□□ 2.26
HOXA4-204ENST00000610970 RHPN1Q8TCX5 695 aa29.15■■■□□ 2.26
HOXA4-204ENST00000610970 ST18O60284 1047 aa29.14■■■□□ 2.26
HOXA4-204ENST00000610970 CD2BP2O95400 341 aaKnown RBP29.14■■■□□ 2.26
HOXA4-204ENST00000610970 ESYT1Q9BSJ8 1104 aa29.14■■■□□ 2.26
HOXA4-204ENST00000610970 CSB-PGBD3P0DP91 1061 aa29.14■■■□□ 2.25
HOXA4-204ENST00000610970 RAB3GAP1Q15042 981 aa29.14■■■□□ 2.25
HOXA4-204ENST00000610970 LINS1Q8NG48 757 aa29.14■■■□□ 2.25
HOXA4-204ENST00000610970 DCAF5Q96JK2 942 aa29.13■■■□□ 2.25
HOXA4-204ENST00000610970 UTYO14607 1347 aa29.13■■■□□ 2.25
HOXA4-204ENST00000610970 MEGF6O75095 1541 aa29.12■■■□□ 2.25
HOXA4-204ENST00000610970 ANXA1P04083 346 aa29.12■■■□□ 2.25
HOXA4-204ENST00000610970 C9orf78Q9NZ63 289 aaPredicted RBP29.12■■■□□ 2.25
HOXA4-204ENST00000610970 MCCP23508 829 aa29.11■■■□□ 2.25
HOXA4-204ENST00000610970 CHMLP26374 656 aa29.11■■■□□ 2.25
HOXA4-204ENST00000610970 GBP4Q96PP9 640 aa29.11■■■□□ 2.25
HOXA4-204ENST00000610970 PROSER3Q2NL68 480 aa29.1■■■□□ 2.25
HOXA4-204ENST00000610970 DDX17Q92841 729 aaKnown RBP29.1■■■□□ 2.25
HOXA4-204ENST00000610970 USP42Q9H9J4 1324 aaKnown RBP29.1■■■□□ 2.25
HOXA4-204ENST00000610970 TRIM6-TRIM34B2RNG4 842 aa29.09■■■□□ 2.25
HOXA4-204ENST00000610970 ANAPC15P60006 121 aa29.09■■■□□ 2.25
HOXA4-204ENST00000610970 ERC1Q8IUD2 1116 aa29.09■■■□□ 2.25
HOXA4-204ENST00000610970 IL17RAQ96F46 866 aa29.08■■■□□ 2.25
HOXA4-204ENST00000610970 PDIA6Q15084 440 aa29.08■■■□□ 2.25
HOXA4-204ENST00000610970 LARP1Q6PKG0 1096 aaKnown RBP29.08■■■□□ 2.25
HOXA4-204ENST00000610970 RILPL2Q969X0 211 aa29.07■■■□□ 2.24
HOXA4-204ENST00000610970 CWC22Q9HCG8 908 aaKnown RBP29.07■■■□□ 2.24
HOXA4-204ENST00000610970 IL1RAPL2Q9NP60 686 aa29.07■■■□□ 2.24
HOXA4-204ENST00000610970 PARP4Q9UKK3 1724 aaKnown RBP29.07■■■□□ 2.24
HOXA4-204ENST00000610970 TTC41PQ6P2S7 1318 aa29.07■■■□□ 2.24
HOXA4-204ENST00000610970 TOM1O60784 492 aa29.06■■■□□ 2.24
HOXA4-204ENST00000610970 C5P01031 1676 aa29.06■■■□□ 2.24
HOXA4-204ENST00000610970 MCM2P49736 904 aa29.06■■■□□ 2.24
HOXA4-204ENST00000610970 NFATC2IPQ8NCF5 419 aa29.06■■■□□ 2.24
HOXA4-204ENST00000610970 TNPO1Q92973 898 aaKnown RBP29.06■■■□□ 2.24
HOXA4-204ENST00000610970 PRAMEF22A3QJZ6 481 aa29.05■■■□□ 2.24
HOXA4-204ENST00000610970 GRM8O00222 908 aa29.05■■■□□ 2.24
HOXA4-204ENST00000610970 TSHZ3Q63HK5 1081 aa29.05■■■□□ 2.24
HOXA4-204ENST00000610970 CLEC17AQ6ZS10 378 aa29.05■■■□□ 2.24
HOXA4-204ENST00000610970 CABLES1Q8TDN4 633 aa29.05■■■□□ 2.24
HOXA4-204ENST00000610970 SNRPA1P09661 255 aaKnown RBP29.04■■■□□ 2.24
HOXA4-204ENST00000610970 SLAIN2Q9P270 581 aa29.04■■■□□ 2.24
HOXA4-204ENST00000610970 PIP4K2BP78356 416 aa29.03■■■□□ 2.24
HOXA4-204ENST00000610970 TTC5Q8N0Z6 440 aa29.03■■■□□ 2.24
HOXA4-204ENST00000610970 PI4K2BQ8TCG2 481 aa29.03■■■□□ 2.24
HOXA4-204ENST00000610970 AK9Q5TCS8 1911 aa29.03■■■□□ 2.24
HOXA4-204ENST00000610970 NEXNQ0ZGT2 675 aa29.03■■■□□ 2.24
HOXA4-204ENST00000610970 BRINP3Q76B58 766 aa29.03■■■□□ 2.24
HOXA4-204ENST00000610970 NUTM1Q86Y26 1132 aa29.03■■■□□ 2.24
HOXA4-204ENST00000610970 TRAK2O60296 914 aa29.02■■■□□ 2.24
HOXA4-204ENST00000610970 NUCB2P80303 420 aa29.02■■■□□ 2.24
HOXA4-204ENST00000610970 CHRNA2Q15822 529 aa29.02■■■□□ 2.24
HOXA4-204ENST00000610970 CNTROBQ8N137 903 aa29.02■■■□□ 2.24
HOXA4-204ENST00000610970 CLASRPQ8N2M8 674 aaKnown RBP29.02■■■□□ 2.24
HOXA4-204ENST00000610970 FMNL2Q96PY5 1086 aa29.02■■■□□ 2.24
HOXA4-204ENST00000610970 CYP27B1O15528 508 aa29.01■■■□□ 2.23
HOXA4-204ENST00000610970 SLC39A6Q13433 755 aa29.01■■■□□ 2.23
HOXA4-204ENST00000610970 OS9Q13438 667 aaPredicted RBP29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms