RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 LIMCH1Q9UPQ0 1083 aa11.41□□□□□ -0.58
TPM1-233ENST00000610733 KIF3AQ9Y496 699 aa11.41□□□□□ -0.58
TPM1-233ENST00000610733 NPATQ14207 1427 aa11.41□□□□□ -0.58
TPM1-233ENST00000610733 ATP5J2-PTCD1G3V325 749 aa11.4□□□□□ -0.58
TPM1-233ENST00000610733 PTCD1O75127 700 aaKnown RBP11.4□□□□□ -0.58
TPM1-233ENST00000610733 SYT1P21579 422 aa11.4□□□□□ -0.58
TPM1-233ENST00000610733 KRT85P78386 507 aa11.4□□□□□ -0.58
TPM1-233ENST00000610733 SLC39A6Q13433 755 aa11.4□□□□□ -0.58
TPM1-233ENST00000610733 EYA1Q99502 592 aa11.4□□□□□ -0.58
TPM1-233ENST00000610733 AK9Q5TCS8 1911 aa11.4□□□□□ -0.58
TPM1-233ENST00000610733 ERICH4A6NGS2 130 aa11.4□□□□□ -0.58
TPM1-233ENST00000610733 ME1P48163 572 aa11.4□□□□□ -0.58
TPM1-233ENST00000610733 NOLC1Q14978 699 aaKnown RBP eCLIP11.4□□□□□ -0.58
TPM1-233ENST00000610733 SMC2O95347 1197 aa11.4□□□□□ -0.59
TPM1-233ENST00000610733 BRD2P25440 801 aaKnown RBP11.4□□□□□ -0.59
TPM1-233ENST00000610733 SKIDA1Q1XH10 827 aa11.4□□□□□ -0.59
TPM1-233ENST00000610733 CCDC183Q5T5S1 534 aa11.4□□□□□ -0.59
TPM1-233ENST00000610733 TTLL5Q6EMB2 1281 aa11.4□□□□□ -0.59
TPM1-233ENST00000610733 ABCC2Q92887 1545 aa11.39□□□□□ -0.59
TPM1-233ENST00000610733 NSD2O96028 1365 aa11.39□□□□□ -0.59
TPM1-233ENST00000610733 RNF20Q5VTR2 975 aa11.39□□□□□ -0.59
TPM1-233ENST00000610733 KIF1BPQ96EK5 621 aa11.39□□□□□ -0.59
TPM1-233ENST00000610733 PHF23Q9BUL5 403 aaPredicted RBP11.39□□□□□ -0.59
TPM1-233ENST00000610733 MAP3K19Q56UN5 1328 aa11.39□□□□□ -0.59
TPM1-233ENST00000610733 KCNQ3O43525 872 aa11.38□□□□□ -0.59
TPM1-233ENST00000610733 PTGS1P23219 599 aa11.38□□□□□ -0.59
TPM1-233ENST00000610733 CCDC186Q7Z3E2 898 aa11.38□□□□□ -0.59
TPM1-233ENST00000610733 PDCL2Q8N4E4 241 aa11.38□□□□□ -0.59
TPM1-233ENST00000610733 DACT1Q9NYF0 836 aa11.38□□□□□ -0.59
TPM1-233ENST00000610733 ABCA8O94911 1581 aa11.38□□□□□ -0.59
TPM1-233ENST00000610733 TTC21BQ7Z4L5 1316 aa11.38□□□□□ -0.59
TPM1-233ENST00000610733 ZSCAN22P10073 491 aaPredicted RBP11.38□□□□□ -0.59
TPM1-233ENST00000610733 SNRKQ9NRH2 765 aa11.38□□□□□ -0.59
TPM1-233ENST00000610733 MAP3K2Q9Y2U5 619 aa11.38□□□□□ -0.59
TPM1-233ENST00000610733 CPLX1O14810 134 aa11.38□□□□□ -0.59
TPM1-233ENST00000610733 FKBP4Q02790 459 aaKnown RBP eCLIP11.38□□□□□ -0.59
TPM1-233ENST00000610733 CCDC73Q6ZRK6 1079 aa11.38□□□□□ -0.59
TPM1-233ENST00000610733 AMOTL2Q9Y2J4 779 aa11.38□□□□□ -0.59
TPM1-233ENST00000610733 KDM5AP29375 1690 aaKnown RBP11.38□□□□□ -0.59
TPM1-233ENST00000610733 MAP3K11Q16584 847 aa11.37□□□□□ -0.59
TPM1-233ENST00000610733 HSP90AB3PQ58FF7 597 aa11.37□□□□□ -0.59
TPM1-233ENST00000610733 DDX46Q7L014 1031 aaKnown RBP11.37□□□□□ -0.59
TPM1-233ENST00000610733 RASEFQ8IZ41 740 aa11.37□□□□□ -0.59
TPM1-233ENST00000610733 CCDC82Q8N4S0 544 aa11.37□□□□□ -0.59
TPM1-233ENST00000610733 DNAAF4Q8WXU2 420 aa11.37□□□□□ -0.59
TPM1-233ENST00000610733 FAM227BQ96M60 508 aa11.37□□□□□ -0.59
TPM1-233ENST00000610733 HAND2P61296 217 aa11.37□□□□□ -0.59
TPM1-233ENST00000610733 LGR6Q9HBX8 967 aa11.37□□□□□ -0.59
TPM1-233ENST00000610733 NOL7Q9UMY1 257 aaKnown RBP11.37□□□□□ -0.59
TPM1-233ENST00000610733 ABCC4O15439 1325 aa11.37□□□□□ -0.59
TPM1-233ENST00000610733 RIMS2Q9UQ26 1411 aa11.37□□□□□ -0.59
TPM1-233ENST00000610733 PES1O00541 588 aaKnown RBP11.37□□□□□ -0.59
TPM1-233ENST00000610733 TTC5Q8N0Z6 440 aa11.37□□□□□ -0.59
TPM1-233ENST00000610733 DNAJC25Q9H1X3 360 aa11.37□□□□□ -0.59
TPM1-233ENST00000610733 ZDHHC9Q9Y397 364 aa11.37□□□□□ -0.59
TPM1-233ENST00000610733 YTHDC2Q9H6S0 1430 aaKnown RBP11.36□□□□□ -0.59
TPM1-233ENST00000610733 RTL1A6NKG5 1358 aa11.36□□□□□ -0.59
TPM1-233ENST00000610733 PTPRCP08575 1304 aa11.36□□□□□ -0.59
TPM1-233ENST00000610733 NRDCO43847 1150 aa11.36□□□□□ -0.59
TPM1-233ENST00000610733 PDILTQ8N807 584 aa11.36□□□□□ -0.59
TPM1-233ENST00000610733 KAT6BQ8WYB5 2073 aa11.36□□□□□ -0.59
TPM1-233ENST00000610733 CHL1O00533 1208 aa11.36□□□□□ -0.59
TPM1-233ENST00000610733 ATP8B2P98198 1209 aa11.36□□□□□ -0.59
TPM1-233ENST00000610733 CCDC129Q6ZRS4 1044 aa11.36□□□□□ -0.59
TPM1-233ENST00000610733 HTATSF1O43719 755 aaKnown RBP11.35□□□□□ -0.59
TPM1-233ENST00000610733 LRMPQ12912 555 aa11.35□□□□□ -0.59
TPM1-233ENST00000610733 ANO6Q4KMQ2 910 aa11.35□□□□□ -0.59
TPM1-233ENST00000610733 KINO60870 393 aaKnown RBP11.35□□□□□ -0.59
TPM1-233ENST00000610733 GLRX3O76003 335 aaKnown RBP11.35□□□□□ -0.59
TPM1-233ENST00000610733 ZNF445P59923 1031 aa11.35□□□□□ -0.59
TPM1-233ENST00000610733 HSP90AB4PQ58FF6 505 aa11.35□□□□□ -0.59
TPM1-233ENST00000610733 MTMR7Q9Y216 660 aa11.35□□□□□ -0.59
TPM1-233ENST00000610733 RBM8AQ9Y5S9 174 aaKnown RBP11.35□□□□□ -0.59
TPM1-233ENST00000610733 POLR3DP05423 398 aaPredicted RBP11.35□□□□□ -0.59
TPM1-233ENST00000610733 MYD88Q99836 296 aa11.35□□□□□ -0.59
TPM1-233ENST00000610733 F13A1P00488 732 aa11.35□□□□□ -0.59
TPM1-233ENST00000610733 ADCK5Q3MIX3 580 aa11.35□□□□□ -0.59
TPM1-233ENST00000610733 CCDC112Q8NEF3 446 aa11.35□□□□□ -0.59
TPM1-233ENST00000610733 ZFP91Q96JP5 570 aaPredicted RBP11.35□□□□□ -0.59
TPM1-233ENST00000610733 ARHGEF5Q12774 1597 aa11.34□□□□□ -0.59
TPM1-233ENST00000610733 ATP7AQ04656 1500 aa11.34□□□□□ -0.59
TPM1-233ENST00000610733 ZNF165P49910 485 aa11.34□□□□□ -0.59
TPM1-233ENST00000610733 PTH1RQ03431 593 aa11.34□□□□□ -0.59
TPM1-233ENST00000610733 SNX14Q9Y5W7 946 aa11.34□□□□□ -0.59
TPM1-233ENST00000610733 ABCC1P33527 1531 aa11.34□□□□□ -0.59
TPM1-233ENST00000610733 LARGE1O95461 756 aa11.34□□□□□ -0.59
TPM1-233ENST00000610733 DDX58O95786 925 aaKnown RBP11.34□□□□□ -0.59
TPM1-233ENST00000610733 TNNT1P13805 278 aa11.34□□□□□ -0.59
TPM1-233ENST00000610733 UBE2HP62256 183 aa11.34□□□□□ -0.59
TPM1-233ENST00000610733 CCDC144CPQ8IYA2 1237 aa11.34□□□□□ -0.59
TPM1-233ENST00000610733 IPO4Q8TEX9 1081 aaKnown RBP11.34□□□□□ -0.59
TPM1-233ENST00000610733 BRF1Q92994 677 aa11.34□□□□□ -0.59
TPM1-233ENST00000610733 CLTCL1P53675 1640 aa11.34□□□□□ -0.59
TPM1-233ENST00000610733 HMGN5P82970 282 aaKnown RBP11.34□□□□□ -0.59
TPM1-233ENST00000610733 RAPGEF4Q8WZA2 1011 aa11.34□□□□□ -0.59
TPM1-233ENST00000610733 IL25Q9H293 177 aa11.34□□□□□ -0.59
TPM1-233ENST00000610733 CLIP2Q9UDT6 1046 aa11.34□□□□□ -0.59
TPM1-233ENST00000610733 U2AF2P26368 475 aaKnown RBP eCLIP11.33□□□□□ -0.6
TPM1-233ENST00000610733 ECHDC1Q9NTX5 307 aa11.33□□□□□ -0.6
TPM1-233ENST00000610733 SOS1Q07889 1333 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms