RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 TEX13AQ9BXU3 409 aaPredicted RBP17.13■□□□□ 0.33
SNX20-205ENST00000610485 PARP3Q9Y6F1 533 aa17.13■□□□□ 0.33
SNX20-205ENST00000610485 KCNQ3O43525 872 aa17.12■□□□□ 0.33
SNX20-205ENST00000610485 NEFMP07197 916 aa17.12■□□□□ 0.33
SNX20-205ENST00000610485 DCTN1Q14203 1278 aa17.12■□□□□ 0.33
SNX20-205ENST00000610485 USPL1Q5W0Q7 1092 aa17.12■□□□□ 0.33
SNX20-205ENST00000610485 NARFQ9UHQ1 456 aa17.12■□□□□ 0.33
SNX20-205ENST00000610485 KIAA1551Q9HCM1 1747 aa17.12■□□□□ 0.33
SNX20-205ENST00000610485 GOLGB1Q14789 3259 aaKnown RBP17.12■□□□□ 0.33
SNX20-205ENST00000610485 ZPR1O75312 459 aa17.11■□□□□ 0.33
SNX20-205ENST00000610485 CANXP27824 592 aaKnown RBP17.11■□□□□ 0.33
SNX20-205ENST00000610485 TM4SF1P30408 202 aa17.11■□□□□ 0.33
SNX20-205ENST00000610485 EIF5P55010 431 aaKnown RBP17.11■□□□□ 0.33
SNX20-205ENST00000610485 TGFB2P61812 414 aa17.11■□□□□ 0.33
SNX20-205ENST00000610485 DDR1Q08345 913 aa17.11■□□□□ 0.33
SNX20-205ENST00000610485 MYBBP1AQ9BQG0 1328 aaKnown RBP17.11■□□□□ 0.33
SNX20-205ENST00000610485 ZNF784Q8NCA9 323 aaPredicted RBP17.1■□□□□ 0.33
SNX20-205ENST00000610485 PNNQ9H307 717 aaKnown RBP17.1■□□□□ 0.33
SNX20-205ENST00000610485 POLRMTO00411 1230 aaKnown RBP17.09■□□□□ 0.33
SNX20-205ENST00000610485 NFE2L2Q16236 605 aa17.09■□□□□ 0.33
SNX20-205ENST00000610485 BCL2L12Q9HB09 334 aa17.09■□□□□ 0.33
SNX20-205ENST00000610485 CHD4Q14839 1912 aa17.09■□□□□ 0.33
SNX20-205ENST00000610485 MAPK8IP3Q9UPT6 1336 aa17.08■□□□□ 0.32
SNX20-205ENST00000610485 A0A087WZG4 1122 aa17.08■□□□□ 0.32
SNX20-205ENST00000610485 IL6STP40189 918 aaPredicted RBP17.08■□□□□ 0.32
SNX20-205ENST00000610485 TAF7Q15545 349 aaPredicted RBP17.07■□□□□ 0.32
SNX20-205ENST00000610485 A0A0G2JLW4 131 aa17.06■□□□□ 0.32
SNX20-205ENST00000610485 A1BGP04217 495 aa17.06■□□□□ 0.32
SNX20-205ENST00000610485 SNRPA1P09661 255 aaKnown RBP17.06■□□□□ 0.32
SNX20-205ENST00000610485 NFIXQ14938 502 aa17.06■□□□□ 0.32
SNX20-205ENST00000610485 WWC3Q9ULE0 1092 aa17.06■□□□□ 0.32
SNX20-205ENST00000610485 SCN7AQ01118 1682 aa17.05■□□□□ 0.32
SNX20-205ENST00000610485 PRAMEF22A3QJZ6 481 aa17.05■□□□□ 0.32
SNX20-205ENST00000610485 DPEP1P16444 411 aa17.05■□□□□ 0.32
SNX20-205ENST00000610485 ZEB1P37275 1124 aaPredicted RBP17.05■□□□□ 0.32
SNX20-205ENST00000610485 USP16Q9Y5T5 823 aa17.05■□□□□ 0.32
SNX20-205ENST00000610485 KCNA3P22001 575 aa17.04■□□□□ 0.32
SNX20-205ENST00000610485 PNISRQ8TF01 805 aaKnown RBP17.04■□□□□ 0.32
SNX20-205ENST00000610485 N4BP2Q86UW6 1770 aaPredicted RBP17.04■□□□□ 0.32
SNX20-205ENST00000610485 NRXN2Q9P2S2 1712 aa17.04■□□□□ 0.32
SNX20-205ENST00000610485 PRKRIP1Q9H875 184 aaPredicted RBP17.03■□□□□ 0.32
SNX20-205ENST00000610485 DLG5Q8TDM6 1919 aa17.03■□□□□ 0.32
SNX20-205ENST00000610485 KDM3BQ7LBC6 1761 aa17.02■□□□□ 0.32
SNX20-205ENST00000610485 THUMPD2Q9BTF0 503 aaKnown RBP17.02■□□□□ 0.32
SNX20-205ENST00000610485 MIS18AQ9NYP9 233 aa17.02■□□□□ 0.32
SNX20-205ENST00000610485 TBC1D2BQ9UPU7 963 aa17.02■□□□□ 0.32
SNX20-205ENST00000610485 ZNF330Q9Y3S2 320 aaPredicted RBP17.02■□□□□ 0.32
SNX20-205ENST00000610485 ADCY9O60503 1353 aa17.02■□□□□ 0.31
SNX20-205ENST00000610485 CAMTA2O94983 1202 aa17.01■□□□□ 0.31
SNX20-205ENST00000610485 SERPINB2P05120 415 aa17.01■□□□□ 0.31
SNX20-205ENST00000610485 BCS1LQ9Y276 419 aa17.01■□□□□ 0.31
SNX20-205ENST00000610485 BRCA1P38398 1863 aaKnown RBP17■□□□□ 0.31
SNX20-205ENST00000610485 TBC1D9BQ66K14 1250 aa17■□□□□ 0.31
SNX20-205ENST00000610485 NPM2Q86SE8 214 aaKnown RBP17■□□□□ 0.31
SNX20-205ENST00000610485 PIM2Q9P1W9 311 aa17■□□□□ 0.31
SNX20-205ENST00000610485 CHRNA5P30532 468 aa16.99■□□□□ 0.31
SNX20-205ENST00000610485 TMPOP42166 694 aaKnown RBP16.99■□□□□ 0.31
SNX20-205ENST00000610485 PIP4K2AP48426 406 aaPredicted RBP16.99■□□□□ 0.31
SNX20-205ENST00000610485 RIPK4P57078 832 aa16.99■□□□□ 0.31
SNX20-205ENST00000610485 EIF4A1P60842 406 aaKnown RBP16.99■□□□□ 0.31
SNX20-205ENST00000610485 DZIP3Q86Y13 1208 aaKnown RBP16.99■□□□□ 0.31
SNX20-205ENST00000610485 LAMB4A4D0S4 1761 aa16.99■□□□□ 0.31
SNX20-205ENST00000610485 BCORQ6W2J9 1755 aa16.99■□□□□ 0.31
SNX20-205ENST00000610485 ATP10DQ9P241 1426 aa16.98■□□□□ 0.31
SNX20-205ENST00000610485 NBPF26B4DH59 902 aa16.98■□□□□ 0.31
SNX20-205ENST00000610485 GIGYF1O75420 1035 aaPredicted RBP16.98■□□□□ 0.31
SNX20-205ENST00000610485 LMOD3Q0VAK6 560 aa16.98■□□□□ 0.31
SNX20-205ENST00000610485 WDR43Q15061 677 aaKnown RBP eCLIP16.98■□□□□ 0.31
SNX20-205ENST00000610485 NBPF10Q6P3W6 841 aaKnown RBP16.98■□□□□ 0.31
SNX20-205ENST00000610485 BICDL1Q6ZP65 573 aa16.98■□□□□ 0.31
SNX20-205ENST00000610485 NBPF15Q8N660 670 aa16.98■□□□□ 0.31
SNX20-205ENST00000610485 CARMIL3Q8ND23 1372 aa16.98■□□□□ 0.31
SNX20-205ENST00000610485 AFDNP55196 1824 aaKnown RBP16.98■□□□□ 0.31
SNX20-205ENST00000610485 RGL2O15211 777 aa16.96■□□□□ 0.31
SNX20-205ENST00000610485 DALRD3Q5D0E6 543 aaKnown RBP16.96■□□□□ 0.31
SNX20-205ENST00000610485 CCDC146Q8IYE0 955 aa16.96■□□□□ 0.31
SNX20-205ENST00000610485 RUNDC1Q96C34 613 aa16.96■□□□□ 0.31
SNX20-205ENST00000610485 BABAM1Q9NWV8 329 aa16.96■□□□□ 0.31
SNX20-205ENST00000610485 CLEC4GQ6UXB4 293 aa16.95■□□□□ 0.3
SNX20-205ENST00000610485 TSPYL4Q9UJ04 414 aa16.95■□□□□ 0.3
SNX20-205ENST00000610485 ADAMTS8Q9UP79 889 aa16.95■□□□□ 0.3
SNX20-205ENST00000610485 PRR5LQ6MZQ0 368 aa16.94■□□□□ 0.3
SNX20-205ENST00000610485 ARHGAP27Q6ZUM4 889 aa16.94■□□□□ 0.3
SNX20-205ENST00000610485 SETDB2Q96T68 719 aa16.94■□□□□ 0.3
SNX20-205ENST00000610485 ZNF652Q9Y2D9 606 aa16.94■□□□□ 0.3
SNX20-205ENST00000610485 RRP7AQ9Y3A4 280 aaKnown RBP16.94■□□□□ 0.3
SNX20-205ENST00000610485 ARFGEF1Q9Y6D6 1849 aa16.93■□□□□ 0.3
SNX20-205ENST00000610485 DLEC1Q9Y238 1755 aa16.93■□□□□ 0.3
SNX20-205ENST00000610485 BRIP1Q9BX63 1249 aa16.93■□□□□ 0.3
SNX20-205ENST00000610485 C2CD5Q86YS7 1000 aa16.92■□□□□ 0.3
SNX20-205ENST00000610485 TRIM35Q9UPQ4 493 aa16.92■□□□□ 0.3
SNX20-205ENST00000610485 PDZRN3Q9UPQ7 1066 aa16.92■□□□□ 0.3
SNX20-205ENST00000610485 ERBB4Q15303 1308 aa16.92■□□□□ 0.3
SNX20-205ENST00000610485 H0YIN7 160 aa16.91■□□□□ 0.3
SNX20-205ENST00000610485 NEUROD2Q15784 382 aa16.91■□□□□ 0.3
SNX20-205ENST00000610485 CNBD1Q8NA66 436 aa16.91■□□□□ 0.3
SNX20-205ENST00000610485 PDE6BP35913 854 aa16.9■□□□□ 0.3
SNX20-205ENST00000610485 ANKRD31Q8N7Z5 1873 aa16.9■□□□□ 0.3
SNX20-205ENST00000610485 CHL1O00533 1208 aa16.89■□□□□ 0.29
SNX20-205ENST00000610485 C1QTNF8P60827 252 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms