RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 SYT1P21579 422 aa24.59■■□□□ 1.53
SSBP3-216ENST00000610401 KIAA2012Q0VF49 1180 aa24.59■■□□□ 1.53
SSBP3-216ENST00000610401 SNX14Q9Y5W7 946 aa24.59■■□□□ 1.53
SSBP3-216ENST00000610401 PI4KAP2A4QPH2 592 aa24.58■■□□□ 1.53
SSBP3-216ENST00000610401 GNAT3A8MTJ3 354 aa24.58■■□□□ 1.53
SSBP3-216ENST00000610401 ZNF500O60304 480 aaPredicted RBP24.58■■□□□ 1.53
SSBP3-216ENST00000610401 ADCK5Q3MIX3 580 aa24.58■■□□□ 1.53
SSBP3-216ENST00000610401 PI4KAP1Q8N8J0 262 aa24.58■■□□□ 1.53
SSBP3-216ENST00000610401 RHPN1Q8TCX5 695 aa24.58■■□□□ 1.53
SSBP3-216ENST00000610401 CRB1P82279 1406 aa24.58■■□□□ 1.53
SSBP3-216ENST00000610401 JAKMIP1Q96N16 626 aaKnown RBP24.58■■□□□ 1.53
SSBP3-216ENST00000610401 WDR33Q9C0J8 1336 aaKnown RBP24.58■■□□□ 1.53
SSBP3-216ENST00000610401 FOSBP53539 338 aa24.58■■□□□ 1.52
SSBP3-216ENST00000610401 STK3Q13188 491 aa24.58■■□□□ 1.52
SSBP3-216ENST00000610401 CUL4AQ13619 759 aa24.58■■□□□ 1.52
SSBP3-216ENST00000610401 TAOK2Q9UL54 1235 aa24.58■■□□□ 1.52
SSBP3-216ENST00000610401 ANKRD26Q9UPS8 1709 aa24.57■■□□□ 1.52
SSBP3-216ENST00000610401 LTKP29376 864 aa24.57■■□□□ 1.52
SSBP3-216ENST00000610401 SIL1Q9H173 461 aa24.57■■□□□ 1.52
SSBP3-216ENST00000610401 PREX1Q8TCU6 1659 aa24.57■■□□□ 1.52
SSBP3-216ENST00000610401 KIF24Q5T7B8 1368 aa24.57■■□□□ 1.52
SSBP3-216ENST00000610401 KIAA0232Q92628 1395 aa24.57■■□□□ 1.52
SSBP3-216ENST00000610401 MCM2P49736 904 aa24.56■■□□□ 1.52
SSBP3-216ENST00000610401 RUFY3Q7L099 469 aa24.56■■□□□ 1.52
SSBP3-216ENST00000610401 CHPF2Q9P2E5 772 aa24.56■■□□□ 1.52
SSBP3-216ENST00000610401 LGR6Q9HBX8 967 aa24.56■■□□□ 1.52
SSBP3-216ENST00000610401 DIAPH3Q9NSV4 1193 aa24.56■■□□□ 1.52
SSBP3-216ENST00000610401 STX6O43752 255 aa24.56■■□□□ 1.52
SSBP3-216ENST00000610401 PTH1RQ03431 593 aa24.56■■□□□ 1.52
SSBP3-216ENST00000610401 AIMP1Q12904 312 aaKnown RBP24.56■■□□□ 1.52
SSBP3-216ENST00000610401 LMOD2Q6P5Q4 547 aa24.56■■□□□ 1.52
SSBP3-216ENST00000610401 GJB2P29033 226 aa24.54■■□□□ 1.52
SSBP3-216ENST00000610401 ABTB2Q8N961 1025 aa24.54■■□□□ 1.52
SSBP3-216ENST00000610401 SALL3Q9BXA9 1300 aa24.54■■□□□ 1.52
SSBP3-216ENST00000610401 CDC42BPGQ6DT37 1551 aa24.54■■□□□ 1.52
SSBP3-216ENST00000610401 TFIP11Q9UBB9 837 aaKnown RBP24.53■■□□□ 1.52
SSBP3-216ENST00000610401 HSPA4P34932 840 aa24.53■■□□□ 1.52
SSBP3-216ENST00000610401 CKAP2LQ8IYA6 745 aa24.53■■□□□ 1.52
SSBP3-216ENST00000610401 RIMS1Q86UR5 1692 aaKnown RBP24.52■■□□□ 1.52
SSBP3-216ENST00000610401 ZSCAN22P10073 491 aaPredicted RBP24.52■■□□□ 1.52
SSBP3-216ENST00000610401 HS1BP3Q53T59 392 aa24.51■■□□□ 1.51
SSBP3-216ENST00000610401 MPRIPQ6WCQ1 1025 aa24.51■■□□□ 1.51
SSBP3-216ENST00000610401 CCDC8Q9H0W5 538 aaPredicted RBP24.51■■□□□ 1.51
SSBP3-216ENST00000610401 NDUFB9Q9Y6M9 179 aa24.51■■□□□ 1.51
SSBP3-216ENST00000610401 CSPP1Q1MSJ5 1256 aa24.51■■□□□ 1.51
SSBP3-216ENST00000610401 AMOTL2Q9Y2J4 779 aa24.51■■□□□ 1.51
SSBP3-216ENST00000610401 NEO1Q92859 1461 aa24.51■■□□□ 1.51
SSBP3-216ENST00000610401 TCHHQ07283 1943 aa24.5■■□□□ 1.51
SSBP3-216ENST00000610401 CWF19L2Q2TBE0 894 aaKnown RBP24.5■■□□□ 1.51
SSBP3-216ENST00000610401 SASS6Q6UVJ0 657 aa24.5■■□□□ 1.51
SSBP3-216ENST00000610401 KLHDC4Q8TBB5 520 aa24.5■■□□□ 1.51
SSBP3-216ENST00000610401 SGSM2O43147 1006 aa24.5■■□□□ 1.51
SSBP3-216ENST00000610401 PHF14O94880 888 aa24.5■■□□□ 1.51
SSBP3-216ENST00000610401 CNTROBQ8N137 903 aa24.5■■□□□ 1.51
SSBP3-216ENST00000610401 PRAMEF22A3QJZ6 481 aa24.5■■□□□ 1.51
SSBP3-216ENST00000610401 NOLC1Q14978 699 aaKnown RBP eCLIP24.5■■□□□ 1.51
SSBP3-216ENST00000610401 PI4K2BQ8TCG2 481 aa24.5■■□□□ 1.51
SSBP3-216ENST00000610401 INTS4Q96HW7 963 aaKnown RBP24.5■■□□□ 1.51
SSBP3-216ENST00000610401 C9orf78Q9NZ63 289 aaPredicted RBP24.49■■□□□ 1.51
SSBP3-216ENST00000610401 LIMCH1Q9UPQ0 1083 aa24.49■■□□□ 1.51
SSBP3-216ENST00000610401 CEBPZQ03701 1054 aaKnown RBP24.49■■□□□ 1.51
SSBP3-216ENST00000610401 CCDC183Q5T5S1 534 aa24.49■■□□□ 1.51
SSBP3-216ENST00000610401 FBXW7Q969H0 707 aa24.49■■□□□ 1.51
SSBP3-216ENST00000610401 RPAP1Q9BWH6 1393 aaPredicted RBP24.48■■□□□ 1.51
SSBP3-216ENST00000610401 AP5Z1O43299 807 aa24.48■■□□□ 1.51
SSBP3-216ENST00000610401 CBX1P83916 185 aa24.48■■□□□ 1.51
SSBP3-216ENST00000610401 FAM227BQ96M60 508 aa24.48■■□□□ 1.51
SSBP3-216ENST00000610401 PDRG1Q9NUG6 133 aa24.48■■□□□ 1.51
SSBP3-216ENST00000610401 ZHX1Q9UKY1 873 aaPredicted RBP24.48■■□□□ 1.51
SSBP3-216ENST00000610401 F13A1P00488 732 aa24.47■■□□□ 1.51
SSBP3-216ENST00000610401 ANAPC15P60006 121 aa24.47■■□□□ 1.51
SSBP3-216ENST00000610401 LRRC59Q96AG4 307 aaKnown RBP24.47■■□□□ 1.51
SSBP3-216ENST00000610401 DRC7Q8IY82 874 aa24.47■■□□□ 1.51
SSBP3-216ENST00000610401 EDC3Q96F86 508 aaKnown RBP24.47■■□□□ 1.51
SSBP3-216ENST00000610401 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.47■■□□□ 1.51
SSBP3-216ENST00000610401 SETD1BQ9UPS6 1966 aaKnown RBP24.47■■□□□ 1.51
SSBP3-216ENST00000610401 IGSF3O75054 1194 aa24.46■■□□□ 1.51
SSBP3-216ENST00000610401 LSG1Q9H089 658 aaKnown RBP24.46■■□□□ 1.51
SSBP3-216ENST00000610401 SPDYE4A6NLX3 237 aa24.46■■□□□ 1.51
SSBP3-216ENST00000610401 HDGFP51858 240 aaKnown RBP24.46■■□□□ 1.51
SSBP3-216ENST00000610401 TAF6LQ9Y6J9 622 aa24.46■■□□□ 1.51
SSBP3-216ENST00000610401 CLTCQ00610 1675 aaKnown RBP24.46■■□□□ 1.51
SSBP3-216ENST00000610401 PIP4K2AP48426 406 aaPredicted RBP24.46■■□□□ 1.51
SSBP3-216ENST00000610401 BOLA2Q9H3K6 86 aa24.46■■□□□ 1.51
SSBP3-216ENST00000610401 IFIT2P09913 472 aaKnown RBP24.45■■□□□ 1.5
SSBP3-216ENST00000610401 AACSQ86V21 672 aa24.45■■□□□ 1.5
SSBP3-216ENST00000610401 KIF1BPQ96EK5 621 aa24.45■■□□□ 1.5
SSBP3-216ENST00000610401 RAD50Q92878 1312 aa24.45■■□□□ 1.5
SSBP3-216ENST00000610401 TSPOAP1O95153 1857 aa24.45■■□□□ 1.5
SSBP3-216ENST00000610401 STAP2Q9UGK3 403 aa24.45■■□□□ 1.5
SSBP3-216ENST00000610401 DLC1Q96QB1 1528 aa24.45■■□□□ 1.5
SSBP3-216ENST00000610401 CHGBP05060 677 aa24.44■■□□□ 1.5
SSBP3-216ENST00000610401 DDX11Q96FC9 970 aa24.44■■□□□ 1.5
SSBP3-216ENST00000610401 SSH3Q8TE77 659 aa24.44■■□□□ 1.5
SSBP3-216ENST00000610401 PYCARDQ9ULZ3 195 aa24.44■■□□□ 1.5
SSBP3-216ENST00000610401 PROSER3Q2NL68 480 aa24.44■■□□□ 1.5
SSBP3-216ENST00000610401 LUZP1Q86V48 1076 aa24.44■■□□□ 1.5
SSBP3-216ENST00000610401 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.44■■□□□ 1.5
SSBP3-216ENST00000610401 HOXC9P31274 260 aa24.43■■□□□ 1.5
SSBP3-216ENST00000610401 ME3Q16798 604 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms