RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 RBM10P98175 930 aaKnown RBP16.74■□□□□ 0.27
PCDHB16-201ENST00000609684 PIBF1Q8WXW3 757 aa16.74■□□□□ 0.27
PCDHB16-201ENST00000609684 PRM3Q9NNZ6 103 aa16.74■□□□□ 0.27
PCDHB16-201ENST00000609684 EIF2AK4Q9P2K8 1649 aaKnown RBP16.74■□□□□ 0.27
PCDHB16-201ENST00000609684 TTC21AQ8NDW8 1320 aa16.74■□□□□ 0.27
PCDHB16-201ENST00000609684 PPFIBP1Q86W92 1011 aa16.74■□□□□ 0.27
PCDHB16-201ENST00000609684 SCAND2PQ9GZW5 306 aaPredicted RBP16.74■□□□□ 0.27
PCDHB16-201ENST00000609684 TRMT112Q9UI30 125 aaKnown RBP16.74■□□□□ 0.27
PCDHB16-201ENST00000609684 PER1O15534 1290 aaPredicted RBP16.74■□□□□ 0.27
PCDHB16-201ENST00000609684 UBE3BQ7Z3V4 1068 aa16.74■□□□□ 0.27
PCDHB16-201ENST00000609684 ARHGEF12Q9NZN5 1544 aa16.74■□□□□ 0.27
PCDHB16-201ENST00000609684 PZPP20742 1482 aa16.73■□□□□ 0.27
PCDHB16-201ENST00000609684 MRPL50Q8N5N7 158 aaKnown RBP16.73■□□□□ 0.27
PCDHB16-201ENST00000609684 EIF4A2Q14240 407 aaKnown RBP16.73■□□□□ 0.27
PCDHB16-201ENST00000609684 DHX8Q14562 1220 aaKnown RBP16.73■□□□□ 0.27
PCDHB16-201ENST00000609684 STIM1Q13586 685 aa16.73■□□□□ 0.27
PCDHB16-201ENST00000609684 RIMS2Q9UQ26 1411 aa16.73■□□□□ 0.27
PCDHB16-201ENST00000609684 NAPBQ9H115 298 aa16.73■□□□□ 0.27
PCDHB16-201ENST00000609684 AK7Q96M32 723 aa16.72■□□□□ 0.27
PCDHB16-201ENST00000609684 ZNF652Q9Y2D9 606 aa16.72■□□□□ 0.27
PCDHB16-201ENST00000609684 PIK3C2GO75747 1445 aa16.72■□□□□ 0.27
PCDHB16-201ENST00000609684 MINDY4BA8MYZ0 360 aa16.72■□□□□ 0.27
PCDHB16-201ENST00000609684 HMGB1P09429 215 aaKnown RBP16.72■□□□□ 0.27
PCDHB16-201ENST00000609684 RLBP1P12271 317 aa16.72■□□□□ 0.27
PCDHB16-201ENST00000609684 SDSP20132 328 aa16.72■□□□□ 0.27
PCDHB16-201ENST00000609684 CCDC112Q8NEF3 446 aa16.72■□□□□ 0.27
PCDHB16-201ENST00000609684 CBFA2T2O43439 604 aa16.72■□□□□ 0.27
PCDHB16-201ENST00000609684 GPTP24298 496 aa16.72■□□□□ 0.27
PCDHB16-201ENST00000609684 CCDC183Q5T5S1 534 aa16.72■□□□□ 0.27
PCDHB16-201ENST00000609684 RHPN1Q8TCX5 695 aa16.72■□□□□ 0.27
PCDHB16-201ENST00000609684 GUCY1B3Q02153 619 aa16.71■□□□□ 0.27
PCDHB16-201ENST00000609684 ZSCAN30Q86W11 494 aa16.71■□□□□ 0.27
PCDHB16-201ENST00000609684 ZNHIT6Q9NWK9 470 aaKnown RBP16.71■□□□□ 0.27
PCDHB16-201ENST00000609684 CHRNA2Q15822 529 aa16.71■□□□□ 0.27
PCDHB16-201ENST00000609684 HSP90AB3PQ58FF7 597 aa16.71■□□□□ 0.27
PCDHB16-201ENST00000609684 ANKRD44Q8N8A2 993 aa16.71■□□□□ 0.27
PCDHB16-201ENST00000609684 PUS7Q96PZ0 661 aaKnown RBP16.71■□□□□ 0.27
PCDHB16-201ENST00000609684 GDPD2Q9HCC8 539 aa16.71■□□□□ 0.27
PCDHB16-201ENST00000609684 CHPF2Q9P2E5 772 aa16.71■□□□□ 0.27
PCDHB16-201ENST00000609684 ZHX3Q9H4I2 956 aa16.71■□□□□ 0.26
PCDHB16-201ENST00000609684 GOLIM4O00461 696 aa16.7■□□□□ 0.26
PCDHB16-201ENST00000609684 C8orf76Q96K31 380 aa16.7■□□□□ 0.26
PCDHB16-201ENST00000609684 RBM5P52756 815 aaKnown RBP eCLIP16.7■□□□□ 0.26
PCDHB16-201ENST00000609684 JARID2Q92833 1246 aaPredicted RBP16.7■□□□□ 0.26
PCDHB16-201ENST00000609684 MAP3K12Q12852 859 aa16.7■□□□□ 0.26
PCDHB16-201ENST00000609684 FAM177A1Q8N128 213 aaPredicted RBP16.7■□□□□ 0.26
PCDHB16-201ENST00000609684 ANKRD18BA2A2Z9 1011 aa16.7■□□□□ 0.26
PCDHB16-201ENST00000609684 CAVIN4Q5BKX8 364 aa16.7■□□□□ 0.26
PCDHB16-201ENST00000609684 ABCC10Q5T3U5 1492 aa16.69■□□□□ 0.26
PCDHB16-201ENST00000609684 ZNF213O14771 459 aa16.69■□□□□ 0.26
PCDHB16-201ENST00000609684 ADAMTS2O95450 1211 aa16.69■□□□□ 0.26
PCDHB16-201ENST00000609684 SETQ01105 290 aaPredicted RBP16.69■□□□□ 0.26
PCDHB16-201ENST00000609684 C8orf34Q49A92 452 aa16.69■□□□□ 0.26
PCDHB16-201ENST00000609684 TSPYL6Q8N831 410 aa16.69■□□□□ 0.26
PCDHB16-201ENST00000609684 SNRPA1P09661 255 aaKnown RBP16.69■□□□□ 0.26
PCDHB16-201ENST00000609684 CWC25Q9NXE8 425 aaPredicted RBP16.69■□□□□ 0.26
PCDHB16-201ENST00000609684 BAG4O95429 457 aaKnown RBP16.69■□□□□ 0.26
PCDHB16-201ENST00000609684 PDE1AP54750 535 aa16.69■□□□□ 0.26
PCDHB16-201ENST00000609684 SNRKQ9NRH2 765 aa16.69■□□□□ 0.26
PCDHB16-201ENST00000609684 DNMT1P26358 1616 aaKnown RBP16.69■□□□□ 0.26
PCDHB16-201ENST00000609684 A0A1W2PP64 1363 aa16.68■□□□□ 0.26
PCDHB16-201ENST00000609684 ODF2Q5BJF6 829 aa16.68■□□□□ 0.26
PCDHB16-201ENST00000609684 SMTNL1A8MU46 457 aa16.68■□□□□ 0.26
PCDHB16-201ENST00000609684 CCT2P78371 535 aaKnown RBP16.68■□□□□ 0.26
PCDHB16-201ENST00000609684 ZSCAN29Q8IWY8 852 aaPredicted RBP16.68■□□□□ 0.26
PCDHB16-201ENST00000609684 GJB2P29033 226 aa16.68■□□□□ 0.26
PCDHB16-201ENST00000609684 COL17A1Q9UMD9 1497 aaPredicted RBP16.68■□□□□ 0.26
PCDHB16-201ENST00000609684 SLC5A1P13866 664 aa16.68■□□□□ 0.26
PCDHB16-201ENST00000609684 ZFYVE27Q5T4F4 411 aa16.68■□□□□ 0.26
PCDHB16-201ENST00000609684 ANKRD13DQ6ZTN6 518 aa16.68■□□□□ 0.26
PCDHB16-201ENST00000609684 PHACTR3Q96KR7 559 aa16.68■□□□□ 0.26
PCDHB16-201ENST00000609684 STX6O43752 255 aa16.67■□□□□ 0.26
PCDHB16-201ENST00000609684 VAMP4O75379 141 aa16.67■□□□□ 0.26
PCDHB16-201ENST00000609684 MTHFSDQ2M296 383 aaKnown RBP16.67■□□□□ 0.26
PCDHB16-201ENST00000609684 CCDC82Q8N4S0 544 aa16.67■□□□□ 0.26
PCDHB16-201ENST00000609684 UQCRHLA0A096LP55 91 aa16.67■□□□□ 0.26
PCDHB16-201ENST00000609684 UQCRHP07919 91 aa16.67■□□□□ 0.26
PCDHB16-201ENST00000609684 ERCC4Q92889 916 aaPredicted RBP16.67■□□□□ 0.26
PCDHB16-201ENST00000609684 SSBP05455 408 aaKnown RBP eCLIP16.67■□□□□ 0.26
PCDHB16-201ENST00000609684 GOLGA8BA8MQT2 603 aa16.67■□□□□ 0.26
PCDHB16-201ENST00000609684 CDR1P51861 262 aa16.67■□□□□ 0.26
PCDHB16-201ENST00000609684 CFAP100Q494V2 611 aa16.67■□□□□ 0.26
PCDHB16-201ENST00000609684 LDHAL6AQ6ZMR3 332 aa16.67■□□□□ 0.26
PCDHB16-201ENST00000609684 TANGO6Q9C0B7 1094 aa16.67■□□□□ 0.26
PCDHB16-201ENST00000609684 CEP131Q9UPN4 1083 aa16.67■□□□□ 0.26
PCDHB16-201ENST00000609684 ZPR1O75312 459 aa16.66■□□□□ 0.26
PCDHB16-201ENST00000609684 KRT24Q2M2I5 525 aa16.66■□□□□ 0.26
PCDHB16-201ENST00000609684 NPATQ14207 1427 aa16.66■□□□□ 0.26
PCDHB16-201ENST00000609684 EXOC5O00471 708 aa16.66■□□□□ 0.26
PCDHB16-201ENST00000609684 C16orf71Q8IYS4 520 aaPredicted RBP16.66■□□□□ 0.26
PCDHB16-201ENST00000609684 CCDC196A0A1B0GTZ2 297 aa16.65■□□□□ 0.26
PCDHB16-201ENST00000609684 CKAP2LQ8IYA6 745 aa16.65■□□□□ 0.26
PCDHB16-201ENST00000609684 DEF6Q9H4E7 631 aa16.65■□□□□ 0.26
PCDHB16-201ENST00000609684 TFIP11Q9UBB9 837 aaKnown RBP16.65■□□□□ 0.26
PCDHB16-201ENST00000609684 CADPS2Q86UW7 1296 aa16.65■□□□□ 0.26
PCDHB16-201ENST00000609684 DISP1Q96F81 1524 aa16.65■□□□□ 0.26
PCDHB16-201ENST00000609684 USP5P45974 858 aa16.65■□□□□ 0.26
PCDHB16-201ENST00000609684 TMX3Q96JJ7 454 aa16.65■□□□□ 0.26
PCDHB16-201ENST00000609684 ANO10Q9NW15 660 aa16.65■□□□□ 0.26
PCDHB16-201ENST00000609684 SLC39A6Q13433 755 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms