RNA–Protein interactions for RNA: ENST00000608624.5

LINC00343-212, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-212ENST00000608624 RGPD3A6NKT7 1758 aaPredicted RBP11.95□□□□□ -0.5
LINC00343-212ENST00000608624 RGPD4Q7Z3J3 1758 aa11.95□□□□□ -0.5
LINC00343-212ENST00000608624 RIPK4P57078 832 aa11.94□□□□□ -0.5
LINC00343-212ENST00000608624 SLC39A6Q13433 755 aa11.94□□□□□ -0.5
LINC00343-212ENST00000608624 IER5LQ5T953 404 aa11.94□□□□□ -0.5
LINC00343-212ENST00000608624 NFATC2IPQ8NCF5 419 aa11.94□□□□□ -0.5
LINC00343-212ENST00000608624 CAMKK2Q96RR4 588 aa11.94□□□□□ -0.5
LINC00343-212ENST00000608624 SLC52A2Q9HAB3 445 aa11.94□□□□□ -0.5
LINC00343-212ENST00000608624 PALLDQ8WX93 1383 aa11.93□□□□□ -0.5
LINC00343-212ENST00000608624 UBR2Q8IWV8 1755 aa11.93□□□□□ -0.5
LINC00343-212ENST00000608624 KCNQ3O43525 872 aa11.93□□□□□ -0.5
LINC00343-212ENST00000608624 CABP4P57796 275 aa11.93□□□□□ -0.5
LINC00343-212ENST00000608624 SLC4A9Q96Q91 983 aa11.93□□□□□ -0.5
LINC00343-212ENST00000608624 ATG3Q9NT62 314 aa11.93□□□□□ -0.5
LINC00343-212ENST00000608624 LRRC4BQ9NT99 713 aa11.93□□□□□ -0.5
LINC00343-212ENST00000608624 TMOD3Q9NYL9 352 aa11.93□□□□□ -0.5
LINC00343-212ENST00000608624 TJP1Q07157 1748 aa11.92□□□□□ -0.5
LINC00343-212ENST00000608624 ERVV-2B6SEH9 535 aa11.92□□□□□ -0.5
LINC00343-212ENST00000608624 HSP90AB1P08238 724 aaKnown RBP11.92□□□□□ -0.5
LINC00343-212ENST00000608624 MIS18AQ9NYP9 233 aa11.92□□□□□ -0.5
LINC00343-212ENST00000608624 SALL2Q9Y467 1007 aaPredicted RBP11.92□□□□□ -0.5
LINC00343-212ENST00000608624 KDM3BQ7LBC6 1761 aa11.92□□□□□ -0.5
LINC00343-212ENST00000608624 ANO8Q9HCE9 1232 aaPredicted RBP11.91□□□□□ -0.5
LINC00343-212ENST00000608624 TUBGCP6Q96RT7 1819 aa11.9□□□□□ -0.5
LINC00343-212ENST00000608624 RASEFQ8IZ41 740 aa11.9□□□□□ -0.5
LINC00343-212ENST00000608624 TAF1LQ8IZX4 1826 aa11.9□□□□□ -0.5
LINC00343-212ENST00000608624 C5P01031 1676 aa11.9□□□□□ -0.5
LINC00343-212ENST00000608624 PTCD1O75127 700 aaKnown RBP11.89□□□□□ -0.51
LINC00343-212ENST00000608624 NEFMP07197 916 aa11.89□□□□□ -0.51
LINC00343-212ENST00000608624 BAG6P46379 1132 aa11.89□□□□□ -0.51
LINC00343-212ENST00000608624 SF3B2Q13435 895 aaKnown RBP11.89□□□□□ -0.51
LINC00343-212ENST00000608624 ITPK1Q13572 414 aa11.89□□□□□ -0.51
LINC00343-212ENST00000608624 TXNRD1Q16881 649 aa11.89□□□□□ -0.51
LINC00343-212ENST00000608624 SMIM5Q71RC9 77 aa11.89□□□□□ -0.51
LINC00343-212ENST00000608624 RTF1Q92541 710 aaKnown RBP11.89□□□□□ -0.51
LINC00343-212ENST00000608624 PNNQ9H307 717 aaKnown RBP11.89□□□□□ -0.51
LINC00343-212ENST00000608624 COL5A3P25940 1745 aaPredicted RBP11.89□□□□□ -0.51
LINC00343-212ENST00000608624 PRAMEF22A3QJZ6 481 aa11.88□□□□□ -0.51
LINC00343-212ENST00000608624 TEFQ10587 303 aa11.88□□□□□ -0.51
LINC00343-212ENST00000608624 ZNF827Q17R98 1081 aa11.88□□□□□ -0.51
LINC00343-212ENST00000608624 AMIGO3Q86WK7 504 aa11.88□□□□□ -0.51
LINC00343-212ENST00000608624 CCDC125Q86Z20 511 aa11.88□□□□□ -0.51
LINC00343-212ENST00000608624 PLSCR1O15162 318 aa11.87□□□□□ -0.51
LINC00343-212ENST00000608624 HTATSF1O43719 755 aaKnown RBP11.87□□□□□ -0.51
LINC00343-212ENST00000608624 KRT24Q2M2I5 525 aa11.87□□□□□ -0.51
LINC00343-212ENST00000608624 LINC00116Q8NCU8 138 aa11.87□□□□□ -0.51
LINC00343-212ENST00000608624 ZNF496Q96IT1 587 aaPredicted RBP11.87□□□□□ -0.51
LINC00343-212ENST00000608624 CCNL1Q9UK58 526 aaPredicted RBP11.87□□□□□ -0.51
LINC00343-212ENST00000608624 MYH14Q7Z406 1995 aaKnown RBP11.87□□□□□ -0.51
LINC00343-212ENST00000608624 CICQ96RK0 1608 aaPredicted RBP11.86□□□□□ -0.51
LINC00343-212ENST00000608624 C4BP0C0L5 1744 aa11.86□□□□□ -0.51
LINC00343-212ENST00000608624 LOC102724428A0A0B4J2F2 783 aa11.86□□□□□ -0.51
LINC00343-212ENST00000608624 SIK1P57059 783 aa11.86□□□□□ -0.51
LINC00343-212ENST00000608624 WWC1Q8IX03 1113 aa11.86□□□□□ -0.51
LINC00343-212ENST00000608624 ZNF521Q96K83 1311 aa11.86□□□□□ -0.51
LINC00343-212ENST00000608624 SRCAPQ6ZRS2 3230 aa11.85□□□□□ -0.51
LINC00343-212ENST00000608624 BTBD11A6QL63 1104 aa11.85□□□□□ -0.51
LINC00343-212ENST00000608624 ZNF790Q6PG37 636 aa11.85□□□□□ -0.51
LINC00343-212ENST00000608624 LAS1LQ9Y4W2 734 aaKnown RBP11.85□□□□□ -0.51
LINC00343-212ENST00000608624 ZNF831Q5JPB2 1677 aa11.84□□□□□ -0.51
LINC00343-212ENST00000608624 LMOD3Q0VAK6 560 aa11.84□□□□□ -0.51
LINC00343-212ENST00000608624 TAF7Q15545 349 aaPredicted RBP11.84□□□□□ -0.51
LINC00343-212ENST00000608624 DNAJC10Q8IXB1 793 aa11.84□□□□□ -0.51
LINC00343-212ENST00000608624 TSR2Q969E8 191 aaKnown RBP11.84□□□□□ -0.51
LINC00343-212ENST00000608624 TMEM121BQ9BXQ6 578 aaPredicted RBP11.84□□□□□ -0.51
LINC00343-212ENST00000608624 PDGFDQ9GZP0 370 aaPredicted RBP11.84□□□□□ -0.51
LINC00343-212ENST00000608624 UBR3Q6ZT12 1888 aa11.83□□□□□ -0.52
LINC00343-212ENST00000608624 PSDA5PKW4 1024 aaPredicted RBP11.83□□□□□ -0.52
LINC00343-212ENST00000608624 ZNF853P0CG23 659 aa11.83□□□□□ -0.52
LINC00343-212ENST00000608624 ATP6V1AP38606 617 aa11.83□□□□□ -0.52
LINC00343-212ENST00000608624 SMARCC1Q92922 1105 aaPredicted RBP11.83□□□□□ -0.52
LINC00343-212ENST00000608624 MBIPQ9NS73 344 aa11.83□□□□□ -0.52
LINC00343-212ENST00000608624 LAMB4A4D0S4 1761 aa11.82□□□□□ -0.52
LINC00343-212ENST00000608624 HEG1Q9ULI3 1381 aa11.82□□□□□ -0.52
LINC00343-212ENST00000608624 CHL1O00533 1208 aa11.82□□□□□ -0.52
LINC00343-212ENST00000608624 PIP4K2AP48426 406 aaPredicted RBP11.82□□□□□ -0.52
LINC00343-212ENST00000608624 EIF4A1P60842 406 aaKnown RBP11.82□□□□□ -0.52
LINC00343-212ENST00000608624 CCDC27Q2M243 656 aa11.82□□□□□ -0.52
LINC00343-212ENST00000608624 TSPYL4Q9UJ04 414 aa11.82□□□□□ -0.52
LINC00343-212ENST00000608624 R3HDM1Q15032 1099 aaKnown RBP11.81□□□□□ -0.52
LINC00343-212ENST00000608624 SLC27A3Q5K4L6 730 aa11.81□□□□□ -0.52
LINC00343-212ENST00000608624 TTC5Q8N0Z6 440 aa11.81□□□□□ -0.52
LINC00343-212ENST00000608624 MARVELD3Q96A59 401 aa11.81□□□□□ -0.52
LINC00343-212ENST00000608624 CASZ1Q86V15 1759 aa11.81□□□□□ -0.52
LINC00343-212ENST00000608624 CDCA7LQ96GN5 454 aa11.8□□□□□ -0.52
LINC00343-212ENST00000608624 IFT57Q9NWB7 429 aa11.8□□□□□ -0.52
LINC00343-212ENST00000608624 FANCIQ9NVI1 1328 aa11.8□□□□□ -0.52
LINC00343-212ENST00000608624 C4AP0C0L4 1744 aa11.8□□□□□ -0.52
LINC00343-212ENST00000608624 CYP19A1P11511 503 aaPredicted RBP11.79□□□□□ -0.52
LINC00343-212ENST00000608624 CRKLP46109 303 aaKnown RBP11.79□□□□□ -0.52
LINC00343-212ENST00000608624 HNRNPUQ00839 825 aaKnown RBP eCLIP11.79□□□□□ -0.52
LINC00343-212ENST00000608624 INTS5Q6P9B9 1019 aaKnown RBP11.79□□□□□ -0.52
LINC00343-212ENST00000608624 CFAP44Q96MT7 982 aa11.79□□□□□ -0.52
LINC00343-212ENST00000608624 FMNL2Q96PY5 1086 aa11.79□□□□□ -0.52
LINC00343-212ENST00000608624 SGIP1Q9BQI5 828 aa11.79□□□□□ -0.52
LINC00343-212ENST00000608624 USP16Q9Y5T5 823 aa11.79□□□□□ -0.52
LINC00343-212ENST00000608624 PNPLA7Q6ZV29 1317 aa11.79□□□□□ -0.52
LINC00343-212ENST00000608624 QSER1Q2KHR3 1735 aa11.78□□□□□ -0.52
LINC00343-212ENST00000608624 PHF14O94880 888 aa11.78□□□□□ -0.52
LINC00343-212ENST00000608624 IRX5P78411 483 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms