RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 NARFQ9UHQ1 456 aa32.7■■■□□ 2.83
SNX5-219ENST00000606602 COL15A1P39059 1388 aa32.7■■■□□ 2.82
SNX5-219ENST00000606602 IL17REQ8NFR9 667 aa32.69■■■□□ 2.82
SNX5-219ENST00000606602 CFAP53Q96M91 514 aa32.68■■■□□ 2.82
SNX5-219ENST00000606602 CANXP27824 592 aaKnown RBP32.67■■■□□ 2.82
SNX5-219ENST00000606602 DALRD3Q5D0E6 543 aaKnown RBP32.67■■■□□ 2.82
SNX5-219ENST00000606602 STARD3NLO95772 234 aa32.66■■■□□ 2.82
SNX5-219ENST00000606602 CHRNA5P30532 468 aa32.66■■■□□ 2.82
SNX5-219ENST00000606602 NFIXQ14938 502 aa32.65■■■□□ 2.82
SNX5-219ENST00000606602 VIRMAQ69YN4 1812 aaKnown RBP32.64■■■□□ 2.82
SNX5-219ENST00000606602 ZNF790Q6PG37 636 aa32.64■■■□□ 2.82
SNX5-219ENST00000606602 ZNF496Q96IT1 587 aaPredicted RBP32.64■■■□□ 2.82
SNX5-219ENST00000606602 KIF3CO14782 793 aa32.63■■■□□ 2.81
SNX5-219ENST00000606602 PRKAR2BP31323 418 aa32.63■■■□□ 2.81
SNX5-219ENST00000606602 PHACTR3Q96KR7 559 aa32.62■■■□□ 2.81
SNX5-219ENST00000606602 BCL2L12Q9HB09 334 aa32.62■■■□□ 2.81
SNX5-219ENST00000606602 NUDCQ9Y266 331 aa32.61■■■□□ 2.81
SNX5-219ENST00000606602 CEP350Q5VT06 3117 aa32.6■■■□□ 2.81
SNX5-219ENST00000606602 C9orf131Q5VYM1 1079 aa32.6■■■□□ 2.81
SNX5-219ENST00000606602 RSPH6AQ9H0K4 717 aa32.6■■■□□ 2.81
SNX5-219ENST00000606602 BRCA1P38398 1863 aaKnown RBP32.6■■■□□ 2.81
SNX5-219ENST00000606602 UBR2Q8IWV8 1755 aa32.6■■■□□ 2.81
SNX5-219ENST00000606602 HEG1Q9ULI3 1381 aa32.59■■■□□ 2.81
SNX5-219ENST00000606602 EIF5P55010 431 aaKnown RBP32.59■■■□□ 2.81
SNX5-219ENST00000606602 TEX13AQ9BXU3 409 aaPredicted RBP32.59■■■□□ 2.81
SNX5-219ENST00000606602 A0A087WZG4 1122 aa32.58■■■□□ 2.81
SNX5-219ENST00000606602 SERPINB2P05120 415 aa32.58■■■□□ 2.81
SNX5-219ENST00000606602 HSPA6P17066 643 aa32.58■■■□□ 2.81
SNX5-219ENST00000606602 PPP2R1AP30153 589 aa32.57■■■□□ 2.8
SNX5-219ENST00000606602 FMNL2Q96PY5 1086 aa32.56■■■□□ 2.8
SNX5-219ENST00000606602 CEMIPQ8WUJ3 1361 aa32.56■■■□□ 2.8
SNX5-219ENST00000606602 U2AF1L5P0DN76 240 aaPredicted RBP32.55■■■□□ 2.8
SNX5-219ENST00000606602 U2AF1Q01081 240 aaKnown RBP eCLIP32.55■■■□□ 2.8
SNX5-219ENST00000606602 BICDL1Q6ZP65 573 aa32.55■■■□□ 2.8
SNX5-219ENST00000606602 ZNF330Q9Y3S2 320 aaPredicted RBP32.55■■■□□ 2.8
SNX5-219ENST00000606602 BTBD11A6QL63 1104 aa32.54■■■□□ 2.8
SNX5-219ENST00000606602 ARFGEF1Q9Y6D6 1849 aa32.53■■■□□ 2.8
SNX5-219ENST00000606602 NMRK2Q9NPI5 230 aa32.52■■■□□ 2.8
SNX5-219ENST00000606602 KCNQ3O43525 872 aa32.51■■■□□ 2.79
SNX5-219ENST00000606602 RNF181Q9P0P0 153 aa32.51■■■□□ 2.79
SNX5-219ENST00000606602 TBC1D2BQ9UPU7 963 aa32.51■■■□□ 2.79
SNX5-219ENST00000606602 IL6STP40189 918 aaPredicted RBP32.5■■■□□ 2.79
SNX5-219ENST00000606602 A1BGP04217 495 aa32.49■■■□□ 2.79
SNX5-219ENST00000606602 TBC1D9BQ66K14 1250 aa32.49■■■□□ 2.79
SNX5-219ENST00000606602 NPM2Q86SE8 214 aaKnown RBP32.49■■■□□ 2.79
SNX5-219ENST00000606602 C2CD5Q86YS7 1000 aa32.49■■■□□ 2.79
SNX5-219ENST00000606602 RTF1Q92541 710 aaKnown RBP32.49■■■□□ 2.79
SNX5-219ENST00000606602 SIPA1L3O60292 1781 aaPredicted RBP32.48■■■□□ 2.79
SNX5-219ENST00000606602 TOMM70O94826 608 aa32.48■■■□□ 2.79
SNX5-219ENST00000606602 NRXN2Q9P2S2 1712 aa32.48■■■□□ 2.79
SNX5-219ENST00000606602 AFDNP55196 1824 aaKnown RBP32.47■■■□□ 2.79
SNX5-219ENST00000606602 CARMIL3Q8ND23 1372 aa32.46■■■□□ 2.79
SNX5-219ENST00000606602 H0YIN7 160 aa32.46■■■□□ 2.79
SNX5-219ENST00000606602 MCM10Q7L590 875 aa32.46■■■□□ 2.79
SNX5-219ENST00000606602 TTLL6Q8N841 843 aa32.46■■■□□ 2.79
SNX5-219ENST00000606602 RASSF7Q02833 373 aa32.43■■■□□ 2.78
SNX5-219ENST00000606602 KDM2BQ8NHM5 1336 aa32.43■■■□□ 2.78
SNX5-219ENST00000606602 USP16Q9Y5T5 823 aa32.42■■■□□ 2.78
SNX5-219ENST00000606602 DCTN1Q14203 1278 aa32.41■■■□□ 2.78
SNX5-219ENST00000606602 CAMTA2O94983 1202 aa32.4■■■□□ 2.78
SNX5-219ENST00000606602 C16orf71Q8IYS4 520 aaPredicted RBP32.4■■■□□ 2.78
SNX5-219ENST00000606602 PRAMEF22A3QJZ6 481 aa32.39■■■□□ 2.78
SNX5-219ENST00000606602 PRR5LQ6MZQ0 368 aa32.39■■■□□ 2.78
SNX5-219ENST00000606602 DZIP3Q86Y13 1208 aaKnown RBP32.39■■■□□ 2.78
SNX5-219ENST00000606602 CCDC24Q8N4L8 307 aa32.39■■■□□ 2.78
SNX5-219ENST00000606602 SETDB2Q96T68 719 aa32.39■■■□□ 2.78
SNX5-219ENST00000606602 BRIP1Q9BX63 1249 aa32.39■■■□□ 2.78
SNX5-219ENST00000606602 SCN7AQ01118 1682 aa32.38■■■□□ 2.77
SNX5-219ENST00000606602 HTATSF1O43719 755 aaKnown RBP32.38■■■□□ 2.77
SNX5-219ENST00000606602 SNRPA1P09661 255 aaKnown RBP32.38■■■□□ 2.77
SNX5-219ENST00000606602 PDE6BP35913 854 aa32.38■■■□□ 2.77
SNX5-219ENST00000606602 PIP4K2AP48426 406 aaPredicted RBP32.38■■■□□ 2.77
SNX5-219ENST00000606602 ZNF622Q969S3 477 aaKnown RBP eCLIP32.38■■■□□ 2.77
SNX5-219ENST00000606602 LMNB1P20700 586 aa32.37■■■□□ 2.77
SNX5-219ENST00000606602 APLP1P51693 650 aa32.37■■■□□ 2.77
SNX5-219ENST00000606602 PDZRN3Q9UPQ7 1066 aa32.37■■■□□ 2.77
SNX5-219ENST00000606602 NPHP1O15259 732 aa32.36■■■□□ 2.77
SNX5-219ENST00000606602 RRAGCQ9HB90 399 aa32.36■■■□□ 2.77
SNX5-219ENST00000606602 RBM46Q8TBY0 533 aaKnown RBP32.35■■■□□ 2.77
SNX5-219ENST00000606602 CNBD1Q8NA66 436 aa32.34■■■□□ 2.77
SNX5-219ENST00000606602 DLEC1Q9Y238 1755 aa32.34■■■□□ 2.77
SNX5-219ENST00000606602 NEFMP07197 916 aa32.33■■■□□ 2.77
SNX5-219ENST00000606602 ZC3H4Q9UPT8 1303 aaKnown RBP32.32■■■□□ 2.76
SNX5-219ENST00000606602 PRELPP51888 382 aa32.32■■■□□ 2.76
SNX5-219ENST00000606602 TAF7Q15545 349 aaPredicted RBP32.32■■■□□ 2.76
SNX5-219ENST00000606602 NFKBIEO00221 500 aa32.31■■■□□ 2.76
SNX5-219ENST00000606602 ST5P78524 1137 aa32.31■■■□□ 2.76
SNX5-219ENST00000606602 ZNF219Q9P2Y4 722 aaPredicted RBP32.31■■■□□ 2.76
SNX5-219ENST00000606602 SBF1O95248 1867 aa32.3■■■□□ 2.76
SNX5-219ENST00000606602 C21orf2O43822 256 aa32.29■■■□□ 2.76
SNX5-219ENST00000606602 CLEC4GQ6UXB4 293 aa32.29■■■□□ 2.76
SNX5-219ENST00000606602 MIS18AQ9NYP9 233 aa32.29■■■□□ 2.76
SNX5-219ENST00000606602 ZNF652Q9Y2D9 606 aa32.28■■■□□ 2.76
SNX5-219ENST00000606602 ANKRD31Q8N7Z5 1873 aa32.27■■■□□ 2.76
SNX5-219ENST00000606602 NBPF26B4DH59 902 aa32.27■■■□□ 2.76
SNX5-219ENST00000606602 NBPF10Q6P3W6 841 aaKnown RBP32.27■■■□□ 2.76
SNX5-219ENST00000606602 NBPF15Q8N660 670 aa32.27■■■□□ 2.76
SNX5-219ENST00000606602 FSTL1Q12841 308 aa32.26■■■□□ 2.75
SNX5-219ENST00000606602 NBPF5PQ86XG9 351 aaPredicted RBP32.26■■■□□ 2.75
SNX5-219ENST00000606602 GLTPD2A6NH11 291 aa32.25■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms