RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 SDSP20132 328 aa24.5■■□□□ 1.51
MMP28-201ENST00000605424 EXOC6BQ9Y2D4 811 aa24.5■■□□□ 1.51
MMP28-201ENST00000605424 RAB11FIP3O75154 756 aa24.49■■□□□ 1.51
MMP28-201ENST00000605424 ALDH1L1O75891 902 aa24.49■■□□□ 1.51
MMP28-201ENST00000605424 HSP90AB1P08238 724 aaKnown RBP24.49■■□□□ 1.51
MMP28-201ENST00000605424 CABLES1Q8TDN4 633 aa24.49■■□□□ 1.51
MMP28-201ENST00000605424 SALL3Q9BXA9 1300 aa24.49■■□□□ 1.51
MMP28-201ENST00000605424 ADCY9O60503 1353 aa24.49■■□□□ 1.51
MMP28-201ENST00000605424 MEGF6O75095 1541 aa24.49■■□□□ 1.51
MMP28-201ENST00000605424 KDM6AO15550 1401 aaPredicted RBP24.49■■□□□ 1.51
MMP28-201ENST00000605424 POLA2Q14181 598 aa24.49■■□□□ 1.51
MMP28-201ENST00000605424 ZNF790Q6PG37 636 aa24.48■■□□□ 1.51
MMP28-201ENST00000605424 KSR2Q6VAB6 950 aa24.48■■□□□ 1.51
MMP28-201ENST00000605424 PKD1L3Q7Z443 1732 aa24.48■■□□□ 1.51
MMP28-201ENST00000605424 DCAF5Q96JK2 942 aa24.47■■□□□ 1.51
MMP28-201ENST00000605424 SLKQ9H2G2 1235 aaPredicted RBP24.47■■□□□ 1.51
MMP28-201ENST00000605424 DDX21Q9NR30 783 aaKnown RBP eCLIP24.47■■□□□ 1.51
MMP28-201ENST00000605424 MRC1P22897 1456 aa24.47■■□□□ 1.51
MMP28-201ENST00000605424 KIF2CQ99661 725 aa24.47■■□□□ 1.51
MMP28-201ENST00000605424 SOS2Q07890 1332 aaPredicted RBP24.46■■□□□ 1.51
MMP28-201ENST00000605424 STAP2Q9UGK3 403 aa24.46■■□□□ 1.51
MMP28-201ENST00000605424 NHSL1Q5SYE7 1610 aa24.46■■□□□ 1.51
MMP28-201ENST00000605424 AOX1Q06278 1338 aa24.45■■□□□ 1.51
MMP28-201ENST00000605424 DDX58O95786 925 aaKnown RBP24.45■■□□□ 1.51
MMP28-201ENST00000605424 CHRNA2Q15822 529 aa24.45■■□□□ 1.51
MMP28-201ENST00000605424 MX1P20591 662 aa24.44■■□□□ 1.5
MMP28-201ENST00000605424 HSP90AB4PQ58FF6 505 aa24.44■■□□□ 1.5
MMP28-201ENST00000605424 PPP1R42Q7Z4L9 355 aa24.44■■□□□ 1.5
MMP28-201ENST00000605424 MAP3K2Q9Y2U5 619 aa24.43■■□□□ 1.5
MMP28-201ENST00000605424 REC8O95072 547 aa24.43■■□□□ 1.5
MMP28-201ENST00000605424 ANXA1P04083 346 aa24.43■■□□□ 1.5
MMP28-201ENST00000605424 NBPF7P0C2Y1 421 aaPredicted RBP24.43■■□□□ 1.5
MMP28-201ENST00000605424 MTX1Q13505 466 aa24.43■■□□□ 1.5
MMP28-201ENST00000605424 USP26Q9BXU7 913 aa24.43■■□□□ 1.5
MMP28-201ENST00000605424 FRAT2O75474 233 aaPredicted RBP24.42■■□□□ 1.5
MMP28-201ENST00000605424 CHMP5Q9NZZ3 219 aa24.42■■□□□ 1.5
MMP28-201ENST00000605424 NFATC2IPQ8NCF5 419 aa24.41■■□□□ 1.5
MMP28-201ENST00000605424 BCL11AQ9H165 835 aa24.41■■□□□ 1.5
MMP28-201ENST00000605424 LINS1Q8NG48 757 aa24.41■■□□□ 1.5
MMP28-201ENST00000605424 CYP27B1O15528 508 aa24.4■■□□□ 1.5
MMP28-201ENST00000605424 SRGAP3O43295 1099 aa24.4■■□□□ 1.5
MMP28-201ENST00000605424 PROSER3Q2NL68 480 aa24.4■■□□□ 1.5
MMP28-201ENST00000605424 PARP4Q9UKK3 1724 aaKnown RBP24.4■■□□□ 1.5
MMP28-201ENST00000605424 WDR17Q8IZU2 1322 aa24.4■■□□□ 1.5
MMP28-201ENST00000605424 PDIA6Q15084 440 aa24.39■■□□□ 1.5
MMP28-201ENST00000605424 KIF1BPQ96EK5 621 aa24.39■■□□□ 1.5
MMP28-201ENST00000605424 TUBGCP6Q96RT7 1819 aa24.39■■□□□ 1.5
MMP28-201ENST00000605424 AHDC1Q5TGY3 1603 aaPredicted RBP24.39■■□□□ 1.49
MMP28-201ENST00000605424 PRAMEF22A3QJZ6 481 aa24.39■■□□□ 1.49
MMP28-201ENST00000605424 ERC2O15083 957 aa24.39■■□□□ 1.49
MMP28-201ENST00000605424 SURF6O75683 361 aaKnown RBP24.39■■□□□ 1.49
MMP28-201ENST00000605424 RABEP1Q15276 862 aa24.39■■□□□ 1.49
MMP28-201ENST00000605424 PRDM11Q9NQV5 511 aa24.38■■□□□ 1.49
MMP28-201ENST00000605424 C9orf78Q9NZ63 289 aaPredicted RBP24.38■■□□□ 1.49
MMP28-201ENST00000605424 UTYO14607 1347 aa24.38■■□□□ 1.49
MMP28-201ENST00000605424 SNRPA1P09661 255 aaKnown RBP24.37■■□□□ 1.49
MMP28-201ENST00000605424 SLC39A6Q13433 755 aa24.37■■□□□ 1.49
MMP28-201ENST00000605424 TTC5Q8N0Z6 440 aa24.37■■□□□ 1.49
MMP28-201ENST00000605424 RHPN1Q8TCX5 695 aa24.37■■□□□ 1.49
MMP28-201ENST00000605424 LARP1Q6PKG0 1096 aaKnown RBP24.36■■□□□ 1.49
MMP28-201ENST00000605424 FMNL2Q96PY5 1086 aa24.36■■□□□ 1.49
MMP28-201ENST00000605424 C5P01031 1676 aa24.36■■□□□ 1.49
MMP28-201ENST00000605424 CIZ1Q9ULV3 898 aaPredicted RBP24.35■■□□□ 1.49
MMP28-201ENST00000605424 K7ELQ4 463 aaPredicted RBP24.35■■□□□ 1.49
MMP28-201ENST00000605424 ZNF496Q96IT1 587 aaPredicted RBP24.35■■□□□ 1.49
MMP28-201ENST00000605424 DDIT3P35638 169 aa24.34■■□□□ 1.49
MMP28-201ENST00000605424 CABP4P57796 275 aa24.34■■□□□ 1.49
MMP28-201ENST00000605424 PHLPP1O60346 1717 aa24.34■■□□□ 1.49
MMP28-201ENST00000605424 COL16A1Q07092 1604 aaPredicted RBP24.34■■□□□ 1.49
MMP28-201ENST00000605424 PCDH11XQ9BZA7 1347 aa24.33■■□□□ 1.49
MMP28-201ENST00000605424 PCDH11YQ9BZA8 1340 aa24.33■■□□□ 1.49
MMP28-201ENST00000605424 COL5A2P05997 1499 aaPredicted RBP24.33■■□□□ 1.49
MMP28-201ENST00000605424 GRM8O00222 908 aa24.33■■□□□ 1.49
MMP28-201ENST00000605424 EPB41L2O43491 1005 aaKnown RBP24.32■■□□□ 1.48
MMP28-201ENST00000605424 NEXNQ0ZGT2 675 aa24.32■■□□□ 1.48
MMP28-201ENST00000605424 GSE1Q14687 1217 aa24.32■■□□□ 1.48
MMP28-201ENST00000605424 RIC3Q7Z5B4 369 aa24.32■■□□□ 1.48
MMP28-201ENST00000605424 SPRYD3Q8NCJ5 442 aa24.32■■□□□ 1.48
MMP28-201ENST00000605424 TOM1L2Q6ZVM7 507 aa24.31■■□□□ 1.48
MMP28-201ENST00000605424 ERC1Q8IUD2 1116 aa24.31■■□□□ 1.48
MMP28-201ENST00000605424 ZCRB1Q8TBF4 217 aaKnown RBP24.31■■□□□ 1.48
MMP28-201ENST00000605424 CARD10Q9BWT7 1032 aa24.31■■□□□ 1.48
MMP28-201ENST00000605424 ABCA3Q99758 1704 aa24.31■■□□□ 1.48
MMP28-201ENST00000605424 USP42Q9H9J4 1324 aaKnown RBP24.3■■□□□ 1.48
MMP28-201ENST00000605424 CWF19L2Q2TBE0 894 aaKnown RBP24.3■■□□□ 1.48
MMP28-201ENST00000605424 ESYT1Q9BSJ8 1104 aa24.3■■□□□ 1.48
MMP28-201ENST00000605424 IL1RAPL2Q9NP60 686 aa24.3■■□□□ 1.48
MMP28-201ENST00000605424 ERVV-2B6SEH9 535 aa24.29■■□□□ 1.48
MMP28-201ENST00000605424 HSPA1LP34931 641 aa24.29■■□□□ 1.48
MMP28-201ENST00000605424 AIMP1Q12904 312 aaKnown RBP24.29■■□□□ 1.48
MMP28-201ENST00000605424 ERBB4Q15303 1308 aa24.29■■□□□ 1.48
MMP28-201ENST00000605424 CHMLP26374 656 aa24.29■■□□□ 1.48
MMP28-201ENST00000605424 NKX1-1Q15270 411 aaPredicted RBP24.29■■□□□ 1.48
MMP28-201ENST00000605424 METTL22Q9BUU2 404 aaPredicted RBP24.29■■□□□ 1.48
MMP28-201ENST00000605424 TRIM6-TRIM34B2RNG4 842 aa24.28■■□□□ 1.48
MMP28-201ENST00000605424 XAGE3Q8WTP9 111 aa24.28■■□□□ 1.48
MMP28-201ENST00000605424 RBM42Q9BTD8 480 aaKnown RBP24.28■■□□□ 1.48
MMP28-201ENST00000605424 TTC41PQ6P2S7 1318 aa24.28■■□□□ 1.48
MMP28-201ENST00000605424 TSHZ3Q63HK5 1081 aa24.27■■□□□ 1.48
MMP28-201ENST00000605424 COPS6Q7L5N1 327 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms