RNA–Protein interactions for RNA: ENST00000605142.1

UBE3B-213, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 1,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-213ENST00000605142 CFAP53Q96M91 514 aa16.28■□□□□ 0.2
UBE3B-213ENST00000605142 LGR6Q9HBX8 967 aa16.28■□□□□ 0.2
UBE3B-213ENST00000605142 HMOX1P09601 288 aa16.27■□□□□ 0.2
UBE3B-213ENST00000605142 C1orf141Q5JVX7 400 aa16.27■□□□□ 0.2
UBE3B-213ENST00000605142 KCPQ6ZWJ8 1503 aa16.27■□□□□ 0.2
UBE3B-213ENST00000605142 SBF1O95248 1867 aa16.27■□□□□ 0.19
UBE3B-213ENST00000605142 CRKLP46109 303 aaKnown RBP16.26■□□□□ 0.19
UBE3B-213ENST00000605142 RRAGCQ9HB90 399 aa16.26■□□□□ 0.19
UBE3B-213ENST00000605142 AKAP4Q5JQC9 854 aa16.25■□□□□ 0.19
UBE3B-213ENST00000605142 INTS5Q6P9B9 1019 aaKnown RBP16.25■□□□□ 0.19
UBE3B-213ENST00000605142 RNF181Q9P0P0 153 aa16.25■□□□□ 0.19
UBE3B-213ENST00000605142 SRP68Q9UHB9 627 aaKnown RBP16.25■□□□□ 0.19
UBE3B-213ENST00000605142 U2SURPO15042 1029 aaKnown RBP16.24■□□□□ 0.19
UBE3B-213ENST00000605142 RNMTO43148 476 aaKnown RBP16.24■□□□□ 0.19
UBE3B-213ENST00000605142 MTHFSDQ2M296 383 aaKnown RBP16.24■□□□□ 0.19
UBE3B-213ENST00000605142 SLC52A2Q9HAB3 445 aa16.24■□□□□ 0.19
UBE3B-213ENST00000605142 CAPN15O75808 1086 aa16.23■□□□□ 0.19
UBE3B-213ENST00000605142 PPP2R1AP30153 589 aa16.23■□□□□ 0.19
UBE3B-213ENST00000605142 DDR1Q08345 913 aa16.23■□□□□ 0.19
UBE3B-213ENST00000605142 SLC39A6Q13433 755 aa16.23■□□□□ 0.19
UBE3B-213ENST00000605142 DNAJC10Q8IXB1 793 aa16.23■□□□□ 0.19
UBE3B-213ENST00000605142 FKBP8Q14318 412 aa16.22■□□□□ 0.19
UBE3B-213ENST00000605142 UBR2Q8IWV8 1755 aa16.22■□□□□ 0.19
UBE3B-213ENST00000605142 USP42Q9H9J4 1324 aaKnown RBP16.21■□□□□ 0.19
UBE3B-213ENST00000605142 VEGFAP15692 232 aaPredicted RBP16.21■□□□□ 0.19
UBE3B-213ENST00000605142 NUDCQ9Y266 331 aa16.21■□□□□ 0.19
UBE3B-213ENST00000605142 SOS1Q07889 1333 aaPredicted RBP16.19■□□□□ 0.18
UBE3B-213ENST00000605142 SIPA1L3O60292 1781 aaPredicted RBP16.19■□□□□ 0.18
UBE3B-213ENST00000605142 GLTPD2A6NH11 291 aa16.19■□□□□ 0.18
UBE3B-213ENST00000605142 HSPA1AP0DMV8 641 aaKnown RBP16.19■□□□□ 0.18
UBE3B-213ENST00000605142 HSPA1BP0DMV9 641 aaKnown RBP16.19■□□□□ 0.18
UBE3B-213ENST00000605142 CYP19A1P11511 503 aaPredicted RBP16.19■□□□□ 0.18
UBE3B-213ENST00000605142 TM4SF1P30408 202 aa16.19■□□□□ 0.18
UBE3B-213ENST00000605142 AFDNP55196 1824 aaKnown RBP16.18■□□□□ 0.18
UBE3B-213ENST00000605142 LMNB1P20700 586 aa16.18■□□□□ 0.18
UBE3B-213ENST00000605142 DDX10Q13206 875 aaKnown RBP16.17■□□□□ 0.18
UBE3B-213ENST00000605142 ZBTB1Q9Y2K1 713 aa16.17■□□□□ 0.18
UBE3B-213ENST00000605142 POLRMTO00411 1230 aaKnown RBP16.16■□□□□ 0.18
UBE3B-213ENST00000605142 CHRNA5P30532 468 aa16.16■□□□□ 0.18
UBE3B-213ENST00000605142 IL17REQ8NFR9 667 aa16.16■□□□□ 0.18
UBE3B-213ENST00000605142 BCL2L12Q9HB09 334 aa16.16■□□□□ 0.18
UBE3B-213ENST00000605142 NRXN2Q9P2S2 1712 aa16.16■□□□□ 0.18
UBE3B-213ENST00000605142 U2AF1L5P0DN76 240 aaPredicted RBP16.15■□□□□ 0.18
UBE3B-213ENST00000605142 U2AF1Q01081 240 aaKnown RBP eCLIP16.15■□□□□ 0.18
UBE3B-213ENST00000605142 RALBP1Q15311 655 aa16.15■□□□□ 0.18
UBE3B-213ENST00000605142 USPL1Q5W0Q7 1092 aa16.15■□□□□ 0.18
UBE3B-213ENST00000605142 GAS2L2Q8NHY3 880 aa16.15■□□□□ 0.18
UBE3B-213ENST00000605142 PRKAR2BP31323 418 aa16.14■□□□□ 0.17
UBE3B-213ENST00000605142 COL15A1P39059 1388 aa16.13■□□□□ 0.17
UBE3B-213ENST00000605142 NFIXQ14938 502 aa16.13■□□□□ 0.17
UBE3B-213ENST00000605142 PHACTR3Q96KR7 559 aa16.13■□□□□ 0.17
UBE3B-213ENST00000605142 RSPH6AQ9H0K4 717 aa16.13■□□□□ 0.17
UBE3B-213ENST00000605142 ZPR1O75312 459 aa16.12■□□□□ 0.17
UBE3B-213ENST00000605142 VSIG10Q8N0Z9 540 aa16.12■□□□□ 0.17
UBE3B-213ENST00000605142 ZNF496Q96IT1 587 aaPredicted RBP16.12■□□□□ 0.17
UBE3B-213ENST00000605142 NARFQ9UHQ1 456 aa16.12■□□□□ 0.17
UBE3B-213ENST00000605142 DLEC1Q9Y238 1755 aa16.12■□□□□ 0.17
UBE3B-213ENST00000605142 RASSF7Q02833 373 aa16.11■□□□□ 0.17
UBE3B-213ENST00000605142 DPY19L2Q6NUT2 758 aa16.11■□□□□ 0.17
UBE3B-213ENST00000605142 TTLL6Q8N841 843 aa16.11■□□□□ 0.17
UBE3B-213ENST00000605142 CREBZFQ9NS37 354 aa16.11■□□□□ 0.17
UBE3B-213ENST00000605142 MYBBP1AQ9BQG0 1328 aaKnown RBP16.11■□□□□ 0.17
UBE3B-213ENST00000605142 CEMIPQ8WUJ3 1361 aa16.11■□□□□ 0.17
UBE3B-213ENST00000605142 GNAT3A8MTJ3 354 aa16.1■□□□□ 0.17
UBE3B-213ENST00000605142 POTECB2RU33 542 aa16.1■□□□□ 0.17
UBE3B-213ENST00000605142 KCNQ3O43525 872 aa16.1■□□□□ 0.17
UBE3B-213ENST00000605142 NEFMP07197 916 aa16.1■□□□□ 0.17
UBE3B-213ENST00000605142 CARMIL3Q8ND23 1372 aa16.1■□□□□ 0.17
UBE3B-213ENST00000605142 CANXP27824 592 aaKnown RBP16.09■□□□□ 0.17
UBE3B-213ENST00000605142 EIF5P55010 431 aaKnown RBP16.09■□□□□ 0.17
UBE3B-213ENST00000605142 ZNF790Q6PG37 636 aa16.09■□□□□ 0.17
UBE3B-213ENST00000605142 PRDM10Q9NQV6 1147 aa16.09■□□□□ 0.17
UBE3B-213ENST00000605142 PDZRN3Q9UPQ7 1066 aa16.09■□□□□ 0.17
UBE3B-213ENST00000605142 ANKRD31Q8N7Z5 1873 aa16.09■□□□□ 0.17
UBE3B-213ENST00000605142 HEG1Q9ULI3 1381 aa16.09■□□□□ 0.17
UBE3B-213ENST00000605142 SCN7AQ01118 1682 aa16.08■□□□□ 0.17
UBE3B-213ENST00000605142 TIAM2Q8IVF5 1701 aa16.08■□□□□ 0.17
UBE3B-213ENST00000605142 CCDC88AQ3V6T2 1871 aa16.08■□□□□ 0.17
UBE3B-213ENST00000605142 NFKBIEO00221 500 aa16.07■□□□□ 0.16
UBE3B-213ENST00000605142 TEFQ10587 303 aa16.07■□□□□ 0.16
UBE3B-213ENST00000605142 DICER1Q9UPY3 1922 aaKnown RBP16.07■□□□□ 0.16
UBE3B-213ENST00000605142 H0YIN7 160 aa16.06■□□□□ 0.16
UBE3B-213ENST00000605142 SLC34A2O95436 690 aa16.06■□□□□ 0.16
UBE3B-213ENST00000605142 SERPINB2P05120 415 aa16.06■□□□□ 0.16
UBE3B-213ENST00000605142 CHADLQ6NUI6 762 aa16.06■□□□□ 0.16
UBE3B-213ENST00000605142 MAPK8IP3Q9UPT6 1336 aa16.05■□□□□ 0.16
UBE3B-213ENST00000605142 TTC5Q8N0Z6 440 aa16.05■□□□□ 0.16
UBE3B-213ENST00000605142 RTF1Q92541 710 aaKnown RBP16.05■□□□□ 0.16
UBE3B-213ENST00000605142 PNNQ9H307 717 aaKnown RBP16.05■□□□□ 0.16
UBE3B-213ENST00000605142 DLG5Q8TDM6 1919 aa16.04■□□□□ 0.16
UBE3B-213ENST00000605142 LTBP3Q9NS15 1303 aa16.04■□□□□ 0.16
UBE3B-213ENST00000605142 PRAMEF22A3QJZ6 481 aa16.04■□□□□ 0.16
UBE3B-213ENST00000605142 A1BGP04217 495 aa16.04■□□□□ 0.16
UBE3B-213ENST00000605142 TBC1D9BQ66K14 1250 aa16.04■□□□□ 0.16
UBE3B-213ENST00000605142 C2CD5Q86YS7 1000 aa16.04■□□□□ 0.16
UBE3B-213ENST00000605142 COL11A2P13942 1736 aaPredicted RBP16.04■□□□□ 0.16
UBE3B-213ENST00000605142 BCORQ6W2J9 1755 aa16.03■□□□□ 0.16
UBE3B-213ENST00000605142 CNTNAP1P78357 1384 aa16.03■□□□□ 0.16
UBE3B-213ENST00000605142 STARD3NLO95772 234 aa16.03■□□□□ 0.16
UBE3B-213ENST00000605142 TBC1D2BQ9UPU7 963 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms