RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 AMOTQ4VCS5 1084 aa14.43□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 CHAMP1Q96JM3 812 aa14.43□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 STAP2Q9UGK3 403 aa14.43□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 CWF19L2Q2TBE0 894 aaKnown RBP14.43□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 MAP3K2Q9Y2U5 619 aa14.43□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 BAG4O95429 457 aaKnown RBP14.42□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 SLC39A6Q13433 755 aa14.42□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 POLA2Q14181 598 aa14.42□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 AIMP1Q12904 312 aaKnown RBP14.42□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 DBF4Q9UBU7 674 aaPredicted RBP14.42□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 HOXB7P09629 217 aa14.42□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 FOXD4L5Q5VV16 416 aaPredicted RBP14.42□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 GAS2L3Q86XJ1 694 aa14.42□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 CABLES1Q8TDN4 633 aa14.42□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 FOXD4L4Q8WXT5 416 aaPredicted RBP14.42□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 ANO8Q9HCE9 1232 aaPredicted RBP14.41□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 UPF3BQ9BZI7 483 aaKnown RBP14.41□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 NLRP2Q9NX02 1062 aa14.41□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 C9orf78Q9NZ63 289 aaPredicted RBP14.41□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 PA2G4Q9UQ80 394 aaKnown RBP14.41□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 PXDNLA1KZ92 1463 aa14.4□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 MCTP1Q6DN14 999 aa14.4□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 MED1Q15648 1581 aaPredicted RBP14.4□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 OS9Q13438 667 aaPredicted RBP14.4□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 PI4K2BQ8TCG2 481 aa14.4□□□□□ -0.1
HMGN3-AS1-201ENST00000604516 TMX3Q96JJ7 454 aa14.39□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 RAB11FIP3O75154 756 aa14.39□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 KIF1BPQ96EK5 621 aa14.39□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 C19orf44Q9H6X5 657 aa14.39□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 ERBB3P21860 1342 aa14.39□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 ZDHHC9Q9Y397 364 aa14.38□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 DDX49Q9Y6V7 483 aaKnown RBP14.38□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 ZNF142P52746 1687 aaPredicted RBP14.38□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 CYP2E1P05181 493 aaPredicted RBP14.38□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 PIP4K2AP48426 406 aaPredicted RBP14.38□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 NUCB2P80303 420 aa14.38□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 CHRNA2Q15822 529 aa14.38□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 KSR2Q6VAB6 950 aa14.38□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 GRPEL1Q9HAV7 217 aa14.38□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 KDM3BQ7LBC6 1761 aa14.37□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 GOLGA6L22H0YM25 854 aa14.37□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 NFATC2IPQ8NCF5 419 aa14.37□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 C1orf167Q5SNV9 1468 aa14.37□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 MYL6BP14649 208 aa14.37□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 CLEC17AQ6ZS10 378 aa14.36□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 RAPGEF4Q8WZA2 1011 aa14.36□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.36□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 NCLP19338 710 aaKnown RBP14.36□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 MCCP23508 829 aa14.36□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 MRE11P49959 708 aa14.36□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 SKOR2Q2VWA4 1001 aaPredicted RBP14.36□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 CWC27Q6UX04 472 aaKnown RBP14.36□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 ADAMTSL3P82987 1691 aa14.36□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 CWC22Q9HCG8 908 aaKnown RBP14.35□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 LMO7Q8WWI1 1683 aa14.35□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 RGPD5Q99666 1765 aa14.35□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 TUBGCP6Q96RT7 1819 aa14.35□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 SLIT3O75094 1523 aa14.35□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 CSB-PGBD3P0DP91 1061 aa14.35□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 PDIA6Q15084 440 aa14.35□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 ZNF790Q6PG37 636 aa14.35□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 LARP6Q9BRS8 491 aaKnown RBP14.35□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 CHMP4AQ9BY43 222 aa14.35□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 SPG7Q9UQ90 795 aa14.35□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 HEG1Q9ULI3 1381 aa14.35□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 ATF3P18847 181 aa14.35□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 JARID2Q92833 1246 aaPredicted RBP14.35□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 KAZALD1Q96I82 304 aa14.35□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 SUCLG2Q96I99 432 aa14.34□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 NCAPD2Q15021 1401 aa14.34□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 AOX1Q06278 1338 aa14.34□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 PRPF40AO75400 957 aaKnown RBP14.34□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 KLHDC4Q8TBB5 520 aa14.34□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 RRAGDQ9NQL2 400 aaPredicted RBP14.34□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 HYPKQ9NX55 129 aa14.34□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 N4BP2Q86UW6 1770 aaPredicted RBP14.33□□□□□ -0.11
HMGN3-AS1-201ENST00000604516 CLASRPQ8N2M8 674 aaKnown RBP14.33□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 SIL1Q9H173 461 aa14.33□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 BICC1Q9H694 974 aaKnown RBP14.33□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 DDX21Q9NR30 783 aaKnown RBP eCLIP14.33□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 LMBRD1Q9NUN5 540 aa14.33□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 PHRF1Q9P1Y6 1649 aaKnown RBP14.33□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 GRM8O00222 908 aa14.33□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 SGSM2O43147 1006 aa14.33□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 ALDH1L1O75891 902 aa14.33□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 FOXD4L6Q3SYB3 417 aaPredicted RBP14.33□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 FOXD4L3Q6VB84 417 aaPredicted RBP14.33□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 RIC3Q7Z5B4 369 aa14.33□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 ZNF496Q96IT1 587 aaPredicted RBP14.33□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 NPHP3Q7Z494 1330 aa14.32□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 DTNBO60941 627 aa14.32□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 IGKV5-2P06315 115 aa14.32□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 KLHL40Q2TBA0 621 aa14.32□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 RASEFQ8IZ41 740 aa14.32□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 CNTROBQ8N137 903 aa14.32□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 SLC52A2Q9HAB3 445 aa14.32□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 TMEM94Q12767 1356 aa14.32□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 HSPA4P34932 840 aa14.32□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 ANAPC15P60006 121 aa14.32□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 MTX1Q13505 466 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms