RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 NRXN3Q9Y4C0 1643 aa18.35■□□□□ 0.53
LYSMD4-211ENST00000604213 KLHL34Q8N239 644 aa18.34■□□□□ 0.53
LYSMD4-211ENST00000604213 RTF1Q92541 710 aaKnown RBP18.34■□□□□ 0.53
LYSMD4-211ENST00000604213 MAP3K19Q56UN5 1328 aa18.34■□□□□ 0.53
LYSMD4-211ENST00000604213 F13A1P00488 732 aa18.34■□□□□ 0.53
LYSMD4-211ENST00000604213 AK2P54819 239 aa18.34■□□□□ 0.53
LYSMD4-211ENST00000604213 RUFY3Q7L099 469 aa18.34■□□□□ 0.53
LYSMD4-211ENST00000604213 IL1RAPL2Q9NP60 686 aa18.34■□□□□ 0.53
LYSMD4-211ENST00000604213 KIF3AQ9Y496 699 aa18.34■□□□□ 0.53
LYSMD4-211ENST00000604213 XRN1Q8IZH2 1706 aaKnown RBP18.34■□□□□ 0.53
LYSMD4-211ENST00000604213 SGSM2O43147 1006 aa18.33■□□□□ 0.53
LYSMD4-211ENST00000604213 AP5Z1O43299 807 aa18.33■□□□□ 0.53
LYSMD4-211ENST00000604213 DMTNQ08495 405 aa18.33■□□□□ 0.53
LYSMD4-211ENST00000604213 TPRNQ4KMQ1 711 aa18.33■□□□□ 0.53
LYSMD4-211ENST00000604213 UTP14CQ5TAP6 766 aaKnown RBP18.33■□□□□ 0.53
LYSMD4-211ENST00000604213 NUTM1Q86Y26 1132 aa18.33■□□□□ 0.53
LYSMD4-211ENST00000604213 SIRT1Q96EB6 747 aa18.33■□□□□ 0.53
LYSMD4-211ENST00000604213 LIMCH1Q9UPQ0 1083 aa18.33■□□□□ 0.53
LYSMD4-211ENST00000604213 SPATA31D1Q6ZQQ2 1576 aa18.33■□□□□ 0.53
LYSMD4-211ENST00000604213 ZSCAN20P17040 1043 aaPredicted RBP18.33■□□□□ 0.52
LYSMD4-211ENST00000604213 LSG1Q9H089 658 aaKnown RBP18.33■□□□□ 0.52
LYSMD4-211ENST00000604213 FIBPO43427 364 aa18.32■□□□□ 0.52
LYSMD4-211ENST00000604213 GIMAP6Q6P9H5 292 aa18.32■□□□□ 0.52
LYSMD4-211ENST00000604213 RASEFQ8IZ41 740 aa18.32■□□□□ 0.52
LYSMD4-211ENST00000604213 KIAA1524Q8TCG1 905 aa18.32■□□□□ 0.52
LYSMD4-211ENST00000604213 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.32■□□□□ 0.52
LYSMD4-211ENST00000604213 SOS1Q07889 1333 aaPredicted RBP18.32■□□□□ 0.52
LYSMD4-211ENST00000604213 FAM177BA6PVY3 158 aa18.32■□□□□ 0.52
LYSMD4-211ENST00000604213 CCDC30Q5VVM6 783 aa18.32■□□□□ 0.52
LYSMD4-211ENST00000604213 PI4K2BQ8TCG2 481 aa18.32■□□□□ 0.52
LYSMD4-211ENST00000604213 LARP6Q9BRS8 491 aaKnown RBP18.32■□□□□ 0.52
LYSMD4-211ENST00000604213 USP44Q9H0E7 712 aa18.32■□□□□ 0.52
LYSMD4-211ENST00000604213 KCNF1Q9H3M0 494 aa18.32■□□□□ 0.52
LYSMD4-211ENST00000604213 MAP4K4O95819 1239 aaPredicted RBP18.31■□□□□ 0.52
LYSMD4-211ENST00000604213 SSH3Q8TE77 659 aa18.31■□□□□ 0.52
LYSMD4-211ENST00000604213 SMC3Q9UQE7 1217 aa18.31■□□□□ 0.52
LYSMD4-211ENST00000604213 ATP6V1DQ9Y5K8 247 aa18.31■□□□□ 0.52
LYSMD4-211ENST00000604213 BCL2L12Q9HB09 334 aa18.31■□□□□ 0.52
LYSMD4-211ENST00000604213 PYCARDQ9ULZ3 195 aa18.31■□□□□ 0.52
LYSMD4-211ENST00000604213 TECPR2O15040 1411 aa18.31■□□□□ 0.52
LYSMD4-211ENST00000604213 USP31Q70CQ4 1352 aa18.3■□□□□ 0.52
LYSMD4-211ENST00000604213 RAB11FIP3O75154 756 aa18.29■□□□□ 0.52
LYSMD4-211ENST00000604213 PPP4R3BQ5MIZ7 849 aa18.29■□□□□ 0.52
LYSMD4-211ENST00000604213 RIMS1Q86UR5 1692 aaKnown RBP18.29■□□□□ 0.52
LYSMD4-211ENST00000604213 FAM208AQ9UK61 1670 aaKnown RBP18.29■□□□□ 0.52
LYSMD4-211ENST00000604213 LARGE1O95461 756 aa18.28■□□□□ 0.52
LYSMD4-211ENST00000604213 UBTFL1P0CB47 393 aaPredicted RBP18.28■□□□□ 0.52
LYSMD4-211ENST00000604213 PLCB2Q00722 1185 aa18.28■□□□□ 0.52
LYSMD4-211ENST00000604213 ATP2B3Q16720 1220 aa18.28■□□□□ 0.52
LYSMD4-211ENST00000604213 NECTIN2Q92692 538 aa18.28■□□□□ 0.52
LYSMD4-211ENST00000604213 MTMR6Q9Y217 621 aa18.28■□□□□ 0.52
LYSMD4-211ENST00000604213 ACEP12821 1306 aa18.28■□□□□ 0.52
LYSMD4-211ENST00000604213 TPM3P06753 285 aa18.28■□□□□ 0.52
LYSMD4-211ENST00000604213 DNM1Q05193 864 aaKnown RBP18.28■□□□□ 0.52
LYSMD4-211ENST00000604213 NALCNQ8IZF0 1738 aa18.28■□□□□ 0.52
LYSMD4-211ENST00000604213 CBX1P83916 185 aa18.27■□□□□ 0.52
LYSMD4-211ENST00000604213 POLA2Q14181 598 aa18.27■□□□□ 0.52
LYSMD4-211ENST00000604213 HYPKQ9NX55 129 aa18.27■□□□□ 0.52
LYSMD4-211ENST00000604213 PXDNLA1KZ92 1463 aa18.27■□□□□ 0.52
LYSMD4-211ENST00000604213 KDRP35968 1356 aa18.27■□□□□ 0.52
LYSMD4-211ENST00000604213 RHPN1Q8TCX5 695 aa18.27■□□□□ 0.52
LYSMD4-211ENST00000604213 SURF6O75683 361 aaKnown RBP18.26■□□□□ 0.51
LYSMD4-211ENST00000604213 CPA1P15085 419 aa18.26■□□□□ 0.51
LYSMD4-211ENST00000604213 PPP1R42Q7Z4L9 355 aa18.26■□□□□ 0.51
LYSMD4-211ENST00000604213 DIAPH3Q9NSV4 1193 aa18.26■□□□□ 0.51
LYSMD4-211ENST00000604213 ZHX1Q9UKY1 873 aaPredicted RBP18.26■□□□□ 0.51
LYSMD4-211ENST00000604213 N4BP2Q86UW6 1770 aaPredicted RBP18.26■□□□□ 0.51
LYSMD4-211ENST00000604213 RIOK3O14730 519 aaKnown RBP18.26■□□□□ 0.51
LYSMD4-211ENST00000604213 SOX12O15370 315 aa18.26■□□□□ 0.51
LYSMD4-211ENST00000604213 GJB2P29033 226 aa18.26■□□□□ 0.51
LYSMD4-211ENST00000604213 PLEKHG3A1L390 1219 aa18.25■□□□□ 0.51
LYSMD4-211ENST00000604213 CASTP20810 708 aaKnown RBP18.25■□□□□ 0.51
LYSMD4-211ENST00000604213 USP6P35125 1406 aa18.25■□□□□ 0.51
LYSMD4-211ENST00000604213 CCDC83Q8IWF9 413 aa18.25■□□□□ 0.51
LYSMD4-211ENST00000604213 CNTROBQ8N137 903 aa18.25■□□□□ 0.51
LYSMD4-211ENST00000604213 HTATSF1O43719 755 aaKnown RBP18.25■□□□□ 0.51
LYSMD4-211ENST00000604213 SPC24Q8NBT2 197 aa18.25■□□□□ 0.51
LYSMD4-211ENST00000604213 PPP6R1Q9UPN7 881 aa18.25■□□□□ 0.51
LYSMD4-211ENST00000604213 SPG7Q9UQ90 795 aa18.25■□□□□ 0.51
LYSMD4-211ENST00000604213 CWC27Q6UX04 472 aaKnown RBP18.24■□□□□ 0.51
LYSMD4-211ENST00000604213 ANKRD7Q92527 254 aa18.24■□□□□ 0.51
LYSMD4-211ENST00000604213 CCDC192P0DO97 292 aa18.24■□□□□ 0.51
LYSMD4-211ENST00000604213 CHAF1AQ13111 956 aaPredicted RBP18.24■□□□□ 0.51
LYSMD4-211ENST00000604213 PDCL2Q8N4E4 241 aa18.24■□□□□ 0.51
LYSMD4-211ENST00000604213 LRRC37A3O60309 1634 aa18.23■□□□□ 0.51
LYSMD4-211ENST00000604213 GOLGA6L6A8MZA4 724 aa18.23■□□□□ 0.51
LYSMD4-211ENST00000604213 CTIFO43310 598 aaKnown RBP18.23■□□□□ 0.51
LYSMD4-211ENST00000604213 DTNBO60941 627 aa18.23■□□□□ 0.51
LYSMD4-211ENST00000604213 VPS53Q5VIR6 699 aa18.23■□□□□ 0.51
LYSMD4-211ENST00000604213 KIF1BPQ96EK5 621 aa18.23■□□□□ 0.51
LYSMD4-211ENST00000604213 EYA1Q99502 592 aa18.23■□□□□ 0.51
LYSMD4-211ENST00000604213 GTPBP4Q9BZE4 634 aaKnown RBP18.23■□□□□ 0.51
LYSMD4-211ENST00000604213 CEP170BQ9Y4F5 1589 aaPredicted RBP18.23■□□□□ 0.51
LYSMD4-211ENST00000604213 IGSF1Q8N6C5 1336 aa18.23■□□□□ 0.51
LYSMD4-211ENST00000604213 ST3GAL1Q11201 340 aa18.23■□□□□ 0.51
LYSMD4-211ENST00000604213 PDRG1Q9NUG6 133 aa18.23■□□□□ 0.51
LYSMD4-211ENST00000604213 ROBO2Q9HCK4 1378 aa18.22■□□□□ 0.51
LYSMD4-211ENST00000604213 ZSCAN31Q96LW9 406 aaPredicted RBP18.22■□□□□ 0.51
LYSMD4-211ENST00000604213 MAP3K5Q99683 1374 aa18.22■□□□□ 0.51
LYSMD4-211ENST00000604213 SH2B1Q9NRF2 756 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms