RNA–Protein interactions for RNA: ENST00000603946.5

NOLC1-208, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best)

Gene NOLC1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-208ENST00000603946 BICDL1Q6ZP65 573 aa10.44□□□□□ -0.74
NOLC1-208ENST00000603946 PDGFDQ9GZP0 370 aaPredicted RBP10.44□□□□□ -0.74
NOLC1-208ENST00000603946 WWC3Q9ULE0 1092 aa10.44□□□□□ -0.74
NOLC1-208ENST00000603946 CALD1Q05682 793 aaKnown RBP10.44□□□□□ -0.74
NOLC1-208ENST00000603946 FKBP5Q13451 457 aaPredicted RBP10.44□□□□□ -0.74
NOLC1-208ENST00000603946 NKX1-1Q15270 411 aaPredicted RBP10.44□□□□□ -0.74
NOLC1-208ENST00000603946 FMNL2Q96PY5 1086 aa10.44□□□□□ -0.74
NOLC1-208ENST00000603946 CCNL1Q9UK58 526 aaPredicted RBP10.44□□□□□ -0.74
NOLC1-208ENST00000603946 FAM196AQ6ZSG2 479 aa10.43□□□□□ -0.74
NOLC1-208ENST00000603946 PROM2Q8N271 834 aa10.43□□□□□ -0.74
NOLC1-208ENST00000603946 ZBTB1Q9Y2K1 713 aa10.43□□□□□ -0.74
NOLC1-208ENST00000603946 ATP5J2-PTCD1G3V325 749 aa10.43□□□□□ -0.74
NOLC1-208ENST00000603946 HTATSF1O43719 755 aaKnown RBP10.43□□□□□ -0.74
NOLC1-208ENST00000603946 TTLL7Q6ZT98 887 aa10.43□□□□□ -0.74
NOLC1-208ENST00000603946 COPS6Q7L5N1 327 aa10.43□□□□□ -0.74
NOLC1-208ENST00000603946 C1orf115Q9H7X2 142 aa10.43□□□□□ -0.74
NOLC1-208ENST00000603946 NRAPQ86VF7 1730 aa10.42□□□□□ -0.74
NOLC1-208ENST00000603946 NBPF26B4DH59 902 aa10.42□□□□□ -0.74
NOLC1-208ENST00000603946 NBPF14Q5TI25 921 aa10.42□□□□□ -0.74
NOLC1-208ENST00000603946 NBPF10Q6P3W6 841 aaKnown RBP10.42□□□□□ -0.74
NOLC1-208ENST00000603946 NBPF15Q8N660 670 aa10.42□□□□□ -0.74
NOLC1-208ENST00000603946 EXOC6Q8TAG9 804 aa10.42□□□□□ -0.74
NOLC1-208ENST00000603946 TNS2Q63HR2 1409 aa10.42□□□□□ -0.74
NOLC1-208ENST00000603946 SNRPA1P09661 255 aaKnown RBP10.42□□□□□ -0.74
NOLC1-208ENST00000603946 STK31Q9BXU1 1019 aa10.42□□□□□ -0.74
NOLC1-208ENST00000603946 BCL11BQ9C0K0 894 aaPredicted RBP10.42□□□□□ -0.74
NOLC1-208ENST00000603946 PALLDQ8WX93 1383 aa10.42□□□□□ -0.74
NOLC1-208ENST00000603946 NCAPD2Q15021 1401 aa10.41□□□□□ -0.74
NOLC1-208ENST00000603946 GPTP24298 496 aa10.41□□□□□ -0.74
NOLC1-208ENST00000603946 SKAP1Q86WV1 359 aa10.41□□□□□ -0.74
NOLC1-208ENST00000603946 PI4KAP2A4QPH2 592 aa10.41□□□□□ -0.74
NOLC1-208ENST00000603946 PI4KAP1Q8N8J0 262 aa10.41□□□□□ -0.74
NOLC1-208ENST00000603946 LINC00116Q8NCU8 138 aa10.41□□□□□ -0.74
NOLC1-208ENST00000603946 XAGE3Q8WTP9 111 aa10.41□□□□□ -0.74
NOLC1-208ENST00000603946 CCDC85AQ96PX6 553 aaPredicted RBP10.41□□□□□ -0.74
NOLC1-208ENST00000603946 GNPATO15228 680 aa10.4□□□□□ -0.74
NOLC1-208ENST00000603946 CWF19L2Q2TBE0 894 aaKnown RBP10.4□□□□□ -0.74
NOLC1-208ENST00000603946 CRBNQ96SW2 442 aa10.4□□□□□ -0.74
NOLC1-208ENST00000603946 TRIM27P14373 513 aa10.4□□□□□ -0.74
NOLC1-208ENST00000603946 MSL1Q68DK7 614 aa10.4□□□□□ -0.74
NOLC1-208ENST00000603946 ITPRIPQ8IWB1 547 aa10.4□□□□□ -0.74
NOLC1-208ENST00000603946 SRP68Q9UHB9 627 aaKnown RBP10.4□□□□□ -0.74
NOLC1-208ENST00000603946 BCL9O00512 1426 aa10.4□□□□□ -0.75
NOLC1-208ENST00000603946 CRKLP46109 303 aaKnown RBP10.39□□□□□ -0.75
NOLC1-208ENST00000603946 TXNRD1Q16881 649 aa10.39□□□□□ -0.75
NOLC1-208ENST00000603946 FTSJ3Q8IY81 847 aaKnown RBP10.39□□□□□ -0.75
NOLC1-208ENST00000603946 SYNE4Q8N205 404 aa10.39□□□□□ -0.75
NOLC1-208ENST00000603946 PSDA5PKW4 1024 aaPredicted RBP10.39□□□□□ -0.75
NOLC1-208ENST00000603946 RRP1P56182 461 aaKnown RBP10.39□□□□□ -0.75
NOLC1-208ENST00000603946 MRPL50Q8N5N7 158 aaKnown RBP10.39□□□□□ -0.75
NOLC1-208ENST00000603946 FLIIQ13045 1269 aa10.39□□□□□ -0.75
NOLC1-208ENST00000603946 CCDC30Q5VVM6 783 aa10.39□□□□□ -0.75
NOLC1-208ENST00000603946 B4GALNT3Q6L9W6 998 aa10.39□□□□□ -0.75
NOLC1-208ENST00000603946 BRWD3Q6RI45 1802 aa10.38□□□□□ -0.75
NOLC1-208ENST00000603946 IL16Q14005 1332 aa10.38□□□□□ -0.75
NOLC1-208ENST00000603946 SF3B2Q13435 895 aaKnown RBP10.38□□□□□ -0.75
NOLC1-208ENST00000603946 PDIA6Q15084 440 aa10.38□□□□□ -0.75
NOLC1-208ENST00000603946 RIC3Q7Z5B4 369 aa10.38□□□□□ -0.75
NOLC1-208ENST00000603946 HLFQ16534 295 aa10.38□□□□□ -0.75
NOLC1-208ENST00000603946 TMEM57Q8N5G2 664 aa10.38□□□□□ -0.75
NOLC1-208ENST00000603946 TFCP2L1Q9NZI6 479 aa10.38□□□□□ -0.75
NOLC1-208ENST00000603946 APBB1O00213 710 aa10.37□□□□□ -0.75
NOLC1-208ENST00000603946 NEFLP07196 543 aa10.37□□□□□ -0.75
NOLC1-208ENST00000603946 CYP19A1P11511 503 aaPredicted RBP10.37□□□□□ -0.75
NOLC1-208ENST00000603946 NWD2Q9ULI1 1742 aa10.37□□□□□ -0.75
NOLC1-208ENST00000603946 HEG1Q9ULI3 1381 aa10.37□□□□□ -0.75
NOLC1-208ENST00000603946 MAP3K2Q9Y2U5 619 aa10.37□□□□□ -0.75
NOLC1-208ENST00000603946 LRRC37A3O60309 1634 aa10.37□□□□□ -0.75
NOLC1-208ENST00000603946 STARD3NLO95772 234 aa10.37□□□□□ -0.75
NOLC1-208ENST00000603946 MYD88Q99836 296 aa10.36□□□□□ -0.75
NOLC1-208ENST00000603946 DBF4Q9UBU7 674 aaPredicted RBP10.36□□□□□ -0.75
NOLC1-208ENST00000603946 INTS5Q6P9B9 1019 aaKnown RBP10.35□□□□□ -0.75
NOLC1-208ENST00000603946 ANO8Q9HCE9 1232 aaPredicted RBP10.35□□□□□ -0.75
NOLC1-208ENST00000603946 ZNF827Q17R98 1081 aa10.35□□□□□ -0.75
NOLC1-208ENST00000603946 ZKSCAN2Q63HK3 967 aa10.35□□□□□ -0.75
NOLC1-208ENST00000603946 SHANK3Q9BYB0 1731 aa10.35□□□□□ -0.75
NOLC1-208ENST00000603946 TOGARAM1Q9Y4F4 1720 aa10.35□□□□□ -0.75
NOLC1-208ENST00000603946 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.35□□□□□ -0.75
NOLC1-208ENST00000603946 ATF7IPQ6VMQ6 1270 aa10.35□□□□□ -0.75
NOLC1-208ENST00000603946 AK7Q96M32 723 aa10.35□□□□□ -0.75
NOLC1-208ENST00000603946 DOT1LQ8TEK3 1739 aa10.34□□□□□ -0.75
NOLC1-208ENST00000603946 PARP4Q9UKK3 1724 aaKnown RBP10.34□□□□□ -0.75
NOLC1-208ENST00000603946 USPL1Q5W0Q7 1092 aa10.34□□□□□ -0.75
NOLC1-208ENST00000603946 ANKRD13DQ6ZTN6 518 aa10.34□□□□□ -0.75
NOLC1-208ENST00000603946 DZIP3Q86Y13 1208 aaKnown RBP10.34□□□□□ -0.75
NOLC1-208ENST00000603946 DZIP1LQ8IYY4 767 aaKnown RBP10.34□□□□□ -0.75
NOLC1-208ENST00000603946 PPP1R1BQ9UD71 204 aaPredicted RBP10.34□□□□□ -0.75
NOLC1-208ENST00000603946 NUTM1Q86Y26 1132 aa10.33□□□□□ -0.76
NOLC1-208ENST00000603946 DDX21Q9NR30 783 aaKnown RBP eCLIP10.33□□□□□ -0.76
NOLC1-208ENST00000603946 CCDC87Q9NVE4 849 aa10.33□□□□□ -0.76
NOLC1-208ENST00000603946 NPHP1O15259 732 aa10.33□□□□□ -0.76
NOLC1-208ENST00000603946 ARHGEF1Q92888 912 aaKnown RBP10.33□□□□□ -0.76
NOLC1-208ENST00000603946 FAM89AQ96GI7 184 aa10.33□□□□□ -0.76
NOLC1-208ENST00000603946 MEIS3Q99687 375 aa10.33□□□□□ -0.76
NOLC1-208ENST00000603946 ABCC6O95255 1503 aa10.32□□□□□ -0.76
NOLC1-208ENST00000603946 NBPF7P0C2Y1 421 aaPredicted RBP10.32□□□□□ -0.76
NOLC1-208ENST00000603946 R3HDM1Q15032 1099 aaKnown RBP10.32□□□□□ -0.76
NOLC1-208ENST00000603946 SMARCC1Q92922 1105 aaPredicted RBP10.32□□□□□ -0.76
NOLC1-208ENST00000603946 ITGB4P16144 1822 aa10.32□□□□□ -0.76
NOLC1-208ENST00000603946 ZBTB7AO95365 584 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms