RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 UBR2Q8IWV8 1755 aa21.79■■□□□ 1.08
TUBE1-206ENST00000603722 KCNQ3O43525 872 aa21.79■■□□□ 1.08
TUBE1-206ENST00000603722 DCTN1Q14203 1278 aa21.79■■□□□ 1.08
TUBE1-206ENST00000603722 TGFB2P61812 414 aa21.78■■□□□ 1.08
TUBE1-206ENST00000603722 DDX10Q13206 875 aaKnown RBP21.78■■□□□ 1.08
TUBE1-206ENST00000603722 A0A0G2JLW4 131 aa21.77■■□□□ 1.08
TUBE1-206ENST00000603722 NARFQ9UHQ1 456 aa21.77■■□□□ 1.08
TUBE1-206ENST00000603722 NEFMP07197 916 aa21.76■■□□□ 1.07
TUBE1-206ENST00000603722 TEX13AQ9BXU3 409 aaPredicted RBP21.76■■□□□ 1.07
TUBE1-206ENST00000603722 VIRMAQ69YN4 1812 aaKnown RBP21.76■■□□□ 1.07
TUBE1-206ENST00000603722 SIPA1L3O60292 1781 aaPredicted RBP21.75■■□□□ 1.07
TUBE1-206ENST00000603722 POLRMTO00411 1230 aaKnown RBP21.75■■□□□ 1.07
TUBE1-206ENST00000603722 HTATSF1O43719 755 aaKnown RBP21.75■■□□□ 1.07
TUBE1-206ENST00000603722 DPEP1P16444 411 aa21.75■■□□□ 1.07
TUBE1-206ENST00000603722 TM4SF1P30408 202 aa21.75■■□□□ 1.07
TUBE1-206ENST00000603722 RALBP1Q15311 655 aa21.75■■□□□ 1.07
TUBE1-206ENST00000603722 EIF5P55010 431 aaKnown RBP21.74■■□□□ 1.07
TUBE1-206ENST00000603722 PLEKHF1Q96S99 279 aa21.74■■□□□ 1.07
TUBE1-206ENST00000603722 BCL2L12Q9HB09 334 aa21.74■■□□□ 1.07
TUBE1-206ENST00000603722 ZNF330Q9Y3S2 320 aaPredicted RBP21.74■■□□□ 1.07
TUBE1-206ENST00000603722 NFIXQ14938 502 aa21.73■■□□□ 1.07
TUBE1-206ENST00000603722 BCS1LQ9Y276 419 aa21.73■■□□□ 1.07
TUBE1-206ENST00000603722 A0A087WZG4 1122 aa21.72■■□□□ 1.07
TUBE1-206ENST00000603722 A1BGP04217 495 aa21.72■■□□□ 1.07
TUBE1-206ENST00000603722 KIAA1551Q9HCM1 1747 aa21.72■■□□□ 1.07
TUBE1-206ENST00000603722 PRAMEF22A3QJZ6 481 aa21.71■■□□□ 1.07
TUBE1-206ENST00000603722 MAPK8IP3Q9UPT6 1336 aa21.71■■□□□ 1.07
TUBE1-206ENST00000603722 KIF13BQ9NQT8 1826 aa21.71■■□□□ 1.07
TUBE1-206ENST00000603722 CHD4Q14839 1912 aa21.7■■□□□ 1.07
TUBE1-206ENST00000603722 IL6STP40189 918 aaPredicted RBP21.7■■□□□ 1.06
TUBE1-206ENST00000603722 NFE2L2Q16236 605 aa21.69■■□□□ 1.06
TUBE1-206ENST00000603722 USP16Q9Y5T5 823 aa21.69■■□□□ 1.06
TUBE1-206ENST00000603722 MYBBP1AQ9BQG0 1328 aaKnown RBP21.69■■□□□ 1.06
TUBE1-206ENST00000603722 ATP10DQ9P241 1426 aa21.69■■□□□ 1.06
TUBE1-206ENST00000603722 SNRPA1P09661 255 aaKnown RBP21.68■■□□□ 1.06
TUBE1-206ENST00000603722 KCNA3P22001 575 aa21.68■■□□□ 1.06
TUBE1-206ENST00000603722 PIP4K2AP48426 406 aaPredicted RBP21.68■■□□□ 1.06
TUBE1-206ENST00000603722 TAF7Q15545 349 aaPredicted RBP21.68■■□□□ 1.06
TUBE1-206ENST00000603722 BICDL1Q6ZP65 573 aa21.68■■□□□ 1.06
TUBE1-206ENST00000603722 PNNQ9H307 717 aaKnown RBP21.68■■□□□ 1.06
TUBE1-206ENST00000603722 MIS18AQ9NYP9 233 aa21.68■■□□□ 1.06
TUBE1-206ENST00000603722 TBC1D2BQ9UPU7 963 aa21.68■■□□□ 1.06
TUBE1-206ENST00000603722 ADCY9O60503 1353 aa21.67■■□□□ 1.06
TUBE1-206ENST00000603722 SERPINB2P05120 415 aa21.67■■□□□ 1.06
TUBE1-206ENST00000603722 CHRNA5P30532 468 aa21.67■■□□□ 1.06
TUBE1-206ENST00000603722 NPM2Q86SE8 214 aaKnown RBP21.67■■□□□ 1.06
TUBE1-206ENST00000603722 THUMPD2Q9BTF0 503 aaKnown RBP21.66■■□□□ 1.06
TUBE1-206ENST00000603722 PIM2Q9P1W9 311 aa21.66■■□□□ 1.06
TUBE1-206ENST00000603722 N4BP2Q86UW6 1770 aaPredicted RBP21.66■■□□□ 1.06
TUBE1-206ENST00000603722 TBC1D9BQ66K14 1250 aa21.65■■□□□ 1.06
TUBE1-206ENST00000603722 GIGYF1O75420 1035 aaPredicted RBP21.64■■□□□ 1.05
TUBE1-206ENST00000603722 DALRD3Q5D0E6 543 aaKnown RBP21.64■■□□□ 1.05
TUBE1-206ENST00000603722 CARMIL3Q8ND23 1372 aa21.63■■□□□ 1.05
TUBE1-206ENST00000603722 SCN7AQ01118 1682 aa21.63■■□□□ 1.05
TUBE1-206ENST00000603722 CAMTA2O94983 1202 aa21.63■■□□□ 1.05
TUBE1-206ENST00000603722 ARHGAP27Q6ZUM4 889 aa21.63■■□□□ 1.05
TUBE1-206ENST00000603722 DZIP3Q86Y13 1208 aaKnown RBP21.63■■□□□ 1.05
TUBE1-206ENST00000603722 PNISRQ8TF01 805 aaKnown RBP21.63■■□□□ 1.05
TUBE1-206ENST00000603722 ZNF526Q8TF50 670 aaPredicted RBP21.62■■□□□ 1.05
TUBE1-206ENST00000603722 C1QTNF8P60827 252 aa21.6■■□□□ 1.05
TUBE1-206ENST00000603722 GPBP1L1Q9HC44 474 aaPredicted RBP21.6■■□□□ 1.05
TUBE1-206ENST00000603722 NBPF26B4DH59 902 aa21.59■■□□□ 1.05
TUBE1-206ENST00000603722 RIPK4P57078 832 aa21.59■■□□□ 1.05
TUBE1-206ENST00000603722 NBPF10Q6P3W6 841 aaKnown RBP21.59■■□□□ 1.05
TUBE1-206ENST00000603722 NBPF15Q8N660 670 aa21.59■■□□□ 1.05
TUBE1-206ENST00000603722 NRXN2Q9P2S2 1712 aa21.59■■□□□ 1.05
TUBE1-206ENST00000603722 EIF4A1P60842 406 aaKnown RBP21.58■■□□□ 1.05
TUBE1-206ENST00000603722 C2CD5Q86YS7 1000 aa21.58■■□□□ 1.05
TUBE1-206ENST00000603722 CCDC146Q8IYE0 955 aa21.58■■□□□ 1.05
TUBE1-206ENST00000603722 CCDC24Q8N4L8 307 aa21.58■■□□□ 1.05
TUBE1-206ENST00000603722 SETDB2Q96T68 719 aa21.58■■□□□ 1.05
TUBE1-206ENST00000603722 WDR43Q15061 677 aaKnown RBP eCLIP21.57■■□□□ 1.04
TUBE1-206ENST00000603722 PRR5LQ6MZQ0 368 aa21.57■■□□□ 1.04
TUBE1-206ENST00000603722 PRKRIP1Q9H875 184 aaPredicted RBP21.57■■□□□ 1.04
TUBE1-206ENST00000603722 TMPOP42166 694 aaKnown RBP21.56■■□□□ 1.04
TUBE1-206ENST00000603722 RRP7AQ9Y3A4 280 aaKnown RBP21.56■■□□□ 1.04
TUBE1-206ENST00000603722 NPHP1O15259 732 aa21.55■■□□□ 1.04
TUBE1-206ENST00000603722 CNBD1Q8NA66 436 aa21.55■■□□□ 1.04
TUBE1-206ENST00000603722 TSPYL4Q9UJ04 414 aa21.55■■□□□ 1.04
TUBE1-206ENST00000603722 ZNF652Q9Y2D9 606 aa21.55■■□□□ 1.04
TUBE1-206ENST00000603722 BRCA1P38398 1863 aaKnown RBP21.55■■□□□ 1.04
TUBE1-206ENST00000603722 KDM3BQ7LBC6 1761 aa21.54■■□□□ 1.04
TUBE1-206ENST00000603722 H0YIN7 160 aa21.54■■□□□ 1.04
TUBE1-206ENST00000603722 LMOD3Q0VAK6 560 aa21.54■■□□□ 1.04
TUBE1-206ENST00000603722 BRIP1Q9BX63 1249 aa21.54■■□□□ 1.04
TUBE1-206ENST00000603722 AFDNP55196 1824 aaKnown RBP21.53■■□□□ 1.04
TUBE1-206ENST00000603722 NEUROD2Q15784 382 aa21.53■■□□□ 1.04
TUBE1-206ENST00000603722 C9orf131Q5VYM1 1079 aa21.53■■□□□ 1.04
TUBE1-206ENST00000603722 CLEC4GQ6UXB4 293 aa21.53■■□□□ 1.04
TUBE1-206ENST00000603722 TTLL6Q8N841 843 aa21.53■■□□□ 1.04
TUBE1-206ENST00000603722 BCORQ6W2J9 1755 aa21.52■■□□□ 1.04
TUBE1-206ENST00000603722 PDE6BP35913 854 aa21.52■■□□□ 1.04
TUBE1-206ENST00000603722 ST5P78524 1137 aa21.52■■□□□ 1.04
TUBE1-206ENST00000603722 NGEFQ8N5V2 710 aa21.52■■□□□ 1.04
TUBE1-206ENST00000603722 DLG5Q8TDM6 1919 aa21.52■■□□□ 1.04
TUBE1-206ENST00000603722 ZEB1P37275 1124 aaPredicted RBP21.51■■□□□ 1.03
TUBE1-206ENST00000603722 RUNDC1Q96C34 613 aa21.51■■□□□ 1.03
TUBE1-206ENST00000603722 ADAMTS8Q9UP79 889 aa21.51■■□□□ 1.03
TUBE1-206ENST00000603722 LAMB4A4D0S4 1761 aa21.51■■□□□ 1.03
TUBE1-206ENST00000603722 SENP3-EIF4A1A0A087X0R7 540 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms