RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 SNRPA1P09661 255 aaKnown RBP31.29■■■□□ 2.6
SSX2IP-209ENST00000603677 DCTN1Q14203 1278 aa31.29■■■□□ 2.6
SSX2IP-209ENST00000603677 RUNDC1Q96C34 613 aa31.29■■■□□ 2.6
SSX2IP-209ENST00000603677 BABAM1Q9NWV8 329 aa31.29■■■□□ 2.6
SSX2IP-209ENST00000603677 MMP10P09238 476 aa31.28■■■□□ 2.6
SSX2IP-209ENST00000603677 NARFQ9UHQ1 456 aa31.28■■■□□ 2.6
SSX2IP-209ENST00000603677 ZBTB1Q9Y2K1 713 aa31.28■■■□□ 2.6
SSX2IP-209ENST00000603677 COL15A1P39059 1388 aa31.28■■■□□ 2.6
SSX2IP-209ENST00000603677 IL6STP40189 918 aaPredicted RBP31.27■■■□□ 2.6
SSX2IP-209ENST00000603677 EIF5P55010 431 aaKnown RBP31.27■■■□□ 2.6
SSX2IP-209ENST00000603677 KLHL34Q8N239 644 aa31.27■■■□□ 2.6
SSX2IP-209ENST00000603677 TMPOP42166 694 aaKnown RBP31.26■■■□□ 2.59
SSX2IP-209ENST00000603677 RIPK4P57078 832 aa31.26■■■□□ 2.59
SSX2IP-209ENST00000603677 NPM2Q86SE8 214 aaKnown RBP31.24■■■□□ 2.59
SSX2IP-209ENST00000603677 ADAMTS8Q9UP79 889 aa31.24■■■□□ 2.59
SSX2IP-209ENST00000603677 PARP3Q9Y6F1 533 aa31.24■■■□□ 2.59
SSX2IP-209ENST00000603677 KCNQ3O43525 872 aa31.22■■■□□ 2.59
SSX2IP-209ENST00000603677 KDM3BQ7LBC6 1761 aa31.21■■■□□ 2.59
SSX2IP-209ENST00000603677 CANXP27824 592 aaKnown RBP31.21■■■□□ 2.59
SSX2IP-209ENST00000603677 NLGN2Q8NFZ4 835 aa31.21■■■□□ 2.59
SSX2IP-209ENST00000603677 KIF13BQ9NQT8 1826 aa31.21■■■□□ 2.59
SSX2IP-209ENST00000603677 TGFB2P61812 414 aa31.2■■■□□ 2.59
SSX2IP-209ENST00000603677 GRIN3BO60391 1043 aa31.19■■■□□ 2.58
SSX2IP-209ENST00000603677 TM4SF1P30408 202 aa31.19■■■□□ 2.58
SSX2IP-209ENST00000603677 GPR162Q16538 588 aa31.19■■■□□ 2.58
SSX2IP-209ENST00000603677 RGL2O15211 777 aa31.18■■■□□ 2.58
SSX2IP-209ENST00000603677 ANP32CO43423 234 aa31.18■■■□□ 2.58
SSX2IP-209ENST00000603677 FKBP8Q14318 412 aa31.18■■■□□ 2.58
SSX2IP-209ENST00000603677 USPL1Q5W0Q7 1092 aa31.18■■■□□ 2.58
SSX2IP-209ENST00000603677 SRP68Q9UHB9 627 aaKnown RBP31.18■■■□□ 2.58
SSX2IP-209ENST00000603677 USP16Q9Y5T5 823 aa31.17■■■□□ 2.58
SSX2IP-209ENST00000603677 EIF4A1P60842 406 aaKnown RBP31.15■■■□□ 2.58
SSX2IP-209ENST00000603677 C10orf71Q711Q0 1435 aa31.15■■■□□ 2.58
SSX2IP-209ENST00000603677 A1BGP04217 495 aa31.14■■■□□ 2.58
SSX2IP-209ENST00000603677 GIGYF1O75420 1035 aaPredicted RBP31.13■■■□□ 2.57
SSX2IP-209ENST00000603677 CHD4Q14839 1912 aa31.13■■■□□ 2.57
SSX2IP-209ENST00000603677 CCDC146Q8IYE0 955 aa31.12■■■□□ 2.57
SSX2IP-209ENST00000603677 MIS18AQ9NYP9 233 aa31.12■■■□□ 2.57
SSX2IP-209ENST00000603677 LAMB4A4D0S4 1761 aa31.12■■■□□ 2.57
SSX2IP-209ENST00000603677 POLRMTO00411 1230 aaKnown RBP31.11■■■□□ 2.57
SSX2IP-209ENST00000603677 THUMPD2Q9BTF0 503 aaKnown RBP31.11■■■□□ 2.57
SSX2IP-209ENST00000603677 TSPYL4Q9UJ04 414 aa31.11■■■□□ 2.57
SSX2IP-209ENST00000603677 CLEC4GQ6UXB4 293 aa31.1■■■□□ 2.57
SSX2IP-209ENST00000603677 UTRNP46939 3433 aa31.09■■■□□ 2.57
SSX2IP-209ENST00000603677 ERBB4Q15303 1308 aa31.09■■■□□ 2.57
SSX2IP-209ENST00000603677 YY1P25490 414 aa31.09■■■□□ 2.57
SSX2IP-209ENST00000603677 BCL2L12Q9HB09 334 aa31.09■■■□□ 2.57
SSX2IP-209ENST00000603677 DDR1Q08345 913 aa31.08■■■□□ 2.57
SSX2IP-209ENST00000603677 TRIM35Q9UPQ4 493 aa31.08■■■□□ 2.57
SSX2IP-209ENST00000603677 SCN7AQ01118 1682 aa31.07■■■□□ 2.56
SSX2IP-209ENST00000603677 CALD1Q05682 793 aaKnown RBP31.07■■■□□ 2.56
SSX2IP-209ENST00000603677 NFIXQ14938 502 aa31.07■■■□□ 2.56
SSX2IP-209ENST00000603677 NEUROD2Q15784 382 aa31.07■■■□□ 2.56
SSX2IP-209ENST00000603677 PRAMEF22A3QJZ6 481 aa31.06■■■□□ 2.56
SSX2IP-209ENST00000603677 CHL1O00533 1208 aa31.06■■■□□ 2.56
SSX2IP-209ENST00000603677 NCBP3Q53F19 620 aaKnown RBP31.06■■■□□ 2.56
SSX2IP-209ENST00000603677 DZIP3Q86Y13 1208 aaKnown RBP31.06■■■□□ 2.56
SSX2IP-209ENST00000603677 NRXN2Q9P2S2 1712 aa31.06■■■□□ 2.56
SSX2IP-209ENST00000603677 TBC1D2BQ9UPU7 963 aa31.05■■■□□ 2.56
SSX2IP-209ENST00000603677 ZNF652Q9Y2D9 606 aa31.05■■■□□ 2.56
SSX2IP-209ENST00000603677 PXDNLA1KZ92 1463 aa31.05■■■□□ 2.56
SSX2IP-209ENST00000603677 GOLGB1Q14789 3259 aaKnown RBP31.04■■■□□ 2.56
SSX2IP-209ENST00000603677 PELP1Q8IZL8 1130 aaKnown RBP31.04■■■□□ 2.56
SSX2IP-209ENST00000603677 RRP7AQ9Y3A4 280 aaKnown RBP31.04■■■□□ 2.56
SSX2IP-209ENST00000603677 ZNF330Q9Y3S2 320 aaPredicted RBP31.04■■■□□ 2.56
SSX2IP-209ENST00000603677 CAMTA2O94983 1202 aa31.03■■■□□ 2.56
SSX2IP-209ENST00000603677 PDZRN3Q9UPQ7 1066 aa31.03■■■□□ 2.56
SSX2IP-209ENST00000603677 NBPF26B4DH59 902 aa31.02■■■□□ 2.56
SSX2IP-209ENST00000603677 SERPINB2P05120 415 aa31.02■■■□□ 2.56
SSX2IP-209ENST00000603677 YBX3P16989 372 aaKnown RBP eCLIP31.02■■■□□ 2.56
SSX2IP-209ENST00000603677 NBPF10Q6P3W6 841 aaKnown RBP31.02■■■□□ 2.56
SSX2IP-209ENST00000603677 NBPF15Q8N660 670 aa31.02■■■□□ 2.56
SSX2IP-209ENST00000603677 KIAA1551Q9HCM1 1747 aa31.01■■■□□ 2.56
SSX2IP-209ENST00000603677 CFAP44Q96MT7 982 aa31.01■■■□□ 2.55
SSX2IP-209ENST00000603677 BCORQ6W2J9 1755 aa31.01■■■□□ 2.55
SSX2IP-209ENST00000603677 APAF1O14727 1248 aa31■■■□□ 2.55
SSX2IP-209ENST00000603677 SETDB2Q96T68 719 aa31■■■□□ 2.55
SSX2IP-209ENST00000603677 CARMIL3Q8ND23 1372 aa31■■■□□ 2.55
SSX2IP-209ENST00000603677 AFDNP55196 1824 aaKnown RBP31■■■□□ 2.55
SSX2IP-209ENST00000603677 HOXB7P09629 217 aa30.99■■■□□ 2.55
SSX2IP-209ENST00000603677 MRS2Q9HD23 443 aa30.99■■■□□ 2.55
SSX2IP-209ENST00000603677 ERVV-1B6SEH8 477 aa30.97■■■□□ 2.55
SSX2IP-209ENST00000603677 TBC1D9BQ66K14 1250 aa30.97■■■□□ 2.55
SSX2IP-209ENST00000603677 PIM2Q9P1W9 311 aa30.97■■■□□ 2.55
SSX2IP-209ENST00000603677 A0A0G2JLW4 131 aa30.96■■■□□ 2.55
SSX2IP-209ENST00000603677 CCDC27Q2M243 656 aa30.96■■■□□ 2.55
SSX2IP-209ENST00000603677 N4BP2Q86UW6 1770 aaPredicted RBP30.96■■■□□ 2.55
SSX2IP-209ENST00000603677 BRCA1P38398 1863 aaKnown RBP30.95■■■□□ 2.55
SSX2IP-209ENST00000603677 DPEP1P16444 411 aa30.95■■■□□ 2.55
SSX2IP-209ENST00000603677 CCDC184Q52MB2 194 aa30.95■■■□□ 2.55
SSX2IP-209ENST00000603677 KCNA3P22001 575 aa30.94■■■□□ 2.54
SSX2IP-209ENST00000603677 GNAI1P63096 354 aa30.94■■■□□ 2.54
SSX2IP-209ENST00000603677 CHMP4AQ9BY43 222 aa30.94■■■□□ 2.54
SSX2IP-209ENST00000603677 IFT57Q9NWB7 429 aa30.94■■■□□ 2.54
SSX2IP-209ENST00000603677 ZNF853P0CG23 659 aa30.92■■■□□ 2.54
SSX2IP-209ENST00000603677 PIP4K2AP48426 406 aaPredicted RBP30.92■■■□□ 2.54
SSX2IP-209ENST00000603677 BICDL1Q6ZP65 573 aa30.92■■■□□ 2.54
SSX2IP-209ENST00000603677 BRIP1Q9BX63 1249 aa30.92■■■□□ 2.54
SSX2IP-209ENST00000603677 PDE6BP35913 854 aa30.91■■■□□ 2.54
SSX2IP-209ENST00000603677 KIF6Q6ZMV9 814 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms