RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 COG6Q9Y2V7 657 aa18.3■□□□□ 0.52
ZNF548-212ENST00000602086 LAMB4A4D0S4 1761 aa18.29■□□□□ 0.52
ZNF548-212ENST00000602086 SNRPA1P09661 255 aaKnown RBP18.28■□□□□ 0.52
ZNF548-212ENST00000602086 TMOD3Q9NYL9 352 aa18.28■□□□□ 0.52
ZNF548-212ENST00000602086 DBF4Q9UBU7 674 aaPredicted RBP18.28■□□□□ 0.52
ZNF548-212ENST00000602086 TNNQ9UQP3 1299 aa18.28■□□□□ 0.52
ZNF548-212ENST00000602086 KCPQ6ZWJ8 1503 aa18.28■□□□□ 0.52
ZNF548-212ENST00000602086 N4BP2Q86UW6 1770 aaPredicted RBP18.27■□□□□ 0.52
ZNF548-212ENST00000602086 BCL9O00512 1426 aa18.27■□□□□ 0.52
ZNF548-212ENST00000602086 SLC39A6Q13433 755 aa18.27■□□□□ 0.52
ZNF548-212ENST00000602086 INTS3Q68E01 1043 aaKnown RBP18.27■□□□□ 0.52
ZNF548-212ENST00000602086 CLUAP1Q96AJ1 413 aa18.27■□□□□ 0.52
ZNF548-212ENST00000602086 ZNF496Q96IT1 587 aaPredicted RBP18.27■□□□□ 0.52
ZNF548-212ENST00000602086 C5P01031 1676 aa18.27■□□□□ 0.52
ZNF548-212ENST00000602086 ERBB4Q15303 1308 aa18.26■□□□□ 0.51
ZNF548-212ENST00000602086 TCERG1O14776 1098 aaKnown RBP18.26■□□□□ 0.51
ZNF548-212ENST00000602086 FLIIQ13045 1269 aa18.26■□□□□ 0.51
ZNF548-212ENST00000602086 B4GALNT3Q6L9W6 998 aa18.26■□□□□ 0.51
ZNF548-212ENST00000602086 TMEM57Q8N5G2 664 aa18.26■□□□□ 0.51
ZNF548-212ENST00000602086 DOT1LQ8TEK3 1739 aa18.26■□□□□ 0.51
ZNF548-212ENST00000602086 PXDNLA1KZ92 1463 aa18.26■□□□□ 0.51
ZNF548-212ENST00000602086 VSIG10Q8N0Z9 540 aa18.25■□□□□ 0.51
ZNF548-212ENST00000602086 NUP188Q5SRE5 1749 aa18.25■□□□□ 0.51
ZNF548-212ENST00000602086 RREB1Q92766 1687 aa18.25■□□□□ 0.51
ZNF548-212ENST00000602086 R3HDM1Q15032 1099 aaKnown RBP18.24■□□□□ 0.51
ZNF548-212ENST00000602086 MARCH10Q8NA82 808 aaPredicted RBP18.24■□□□□ 0.51
ZNF548-212ENST00000602086 PIGBQ92521 554 aa18.24■□□□□ 0.51
ZNF548-212ENST00000602086 DDX21Q9NR30 783 aaKnown RBP eCLIP18.24■□□□□ 0.51
ZNF548-212ENST00000602086 HYPKQ9NX55 129 aa18.24■□□□□ 0.51
ZNF548-212ENST00000602086 EIF2S2P20042 333 aaKnown RBP18.23■□□□□ 0.51
ZNF548-212ENST00000602086 G2E3Q7L622 706 aa18.23■□□□□ 0.51
ZNF548-212ENST00000602086 ITPRIPQ8IWB1 547 aa18.23■□□□□ 0.51
ZNF548-212ENST00000602086 CCT4P50991 539 aaKnown RBP18.22■□□□□ 0.51
ZNF548-212ENST00000602086 EZH2Q15910 746 aaKnown RBP18.22■□□□□ 0.51
ZNF548-212ENST00000602086 TEX13AQ9BXU3 409 aaPredicted RBP18.22■□□□□ 0.51
ZNF548-212ENST00000602086 ZBTB40Q9NUA8 1239 aa18.22■□□□□ 0.51
ZNF548-212ENST00000602086 CHPF2Q9P2E5 772 aa18.22■□□□□ 0.51
ZNF548-212ENST00000602086 ZBTB7BO15156 539 aaPredicted RBP18.21■□□□□ 0.51
ZNF548-212ENST00000602086 PELP1Q8IZL8 1130 aaKnown RBP18.21■□□□□ 0.51
ZNF548-212ENST00000602086 CICQ96RK0 1608 aaPredicted RBP18.2■□□□□ 0.5
ZNF548-212ENST00000602086 IBTKQ9P2D0 1353 aaPredicted RBP18.2■□□□□ 0.5
ZNF548-212ENST00000602086 ATG3Q9NT62 314 aa18.2■□□□□ 0.5
ZNF548-212ENST00000602086 PRAMEF22A3QJZ6 481 aa18.19■□□□□ 0.5
ZNF548-212ENST00000602086 TRIM37O94972 964 aa18.19■□□□□ 0.5
ZNF548-212ENST00000602086 FKBP5Q13451 457 aaPredicted RBP18.19■□□□□ 0.5
ZNF548-212ENST00000602086 PDIA6Q15084 440 aa18.19■□□□□ 0.5
ZNF548-212ENST00000602086 CENPQQ7L2Z9 268 aaPredicted RBP18.19■□□□□ 0.5
ZNF548-212ENST00000602086 NECTIN2Q92692 538 aa18.19■□□□□ 0.5
ZNF548-212ENST00000602086 KDM2BQ8NHM5 1336 aa18.19■□□□□ 0.5
ZNF548-212ENST00000602086 ZNF831Q5JPB2 1677 aa18.18■□□□□ 0.5
ZNF548-212ENST00000602086 USP16Q9Y5T5 823 aa18.18■□□□□ 0.5
ZNF548-212ENST00000602086 ATP10DQ9P241 1426 aa18.17■□□□□ 0.5
ZNF548-212ENST00000602086 PRIM1P49642 420 aaKnown RBP18.17■□□□□ 0.5
ZNF548-212ENST00000602086 PHAXQ9H814 394 aaKnown RBP18.17■□□□□ 0.5
ZNF548-212ENST00000602086 ASAP1Q9ULH1 1129 aa18.17■□□□□ 0.5
ZNF548-212ENST00000602086 DDX58O95786 925 aaKnown RBP18.16■□□□□ 0.5
ZNF548-212ENST00000602086 LRP10Q7Z4F1 713 aa18.16■□□□□ 0.5
ZNF548-212ENST00000602086 KAT6BQ8WYB5 2073 aa18.16■□□□□ 0.5
ZNF548-212ENST00000602086 KSR2Q6VAB6 950 aa18.15■□□□□ 0.5
ZNF548-212ENST00000602086 SMARCC1Q92922 1105 aaPredicted RBP18.15■□□□□ 0.5
ZNF548-212ENST00000602086 HDAC1Q13547 482 aaPredicted RBP18.14■□□□□ 0.49
ZNF548-212ENST00000602086 PROSER3Q2NL68 480 aa18.14■□□□□ 0.49
ZNF548-212ENST00000602086 DNAAF4Q8WXU2 420 aa18.14■□□□□ 0.49
ZNF548-212ENST00000602086 RWDD1Q9H446 243 aaPredicted RBP18.14■□□□□ 0.49
ZNF548-212ENST00000602086 PCDHB15Q9Y5E8 787 aa18.14■□□□□ 0.49
ZNF548-212ENST00000602086 NHSQ6T4R5 1651 aa18.14■□□□□ 0.49
ZNF548-212ENST00000602086 SBF2Q86WG5 1849 aa18.14■□□□□ 0.49
ZNF548-212ENST00000602086 PTCD1O75127 700 aaKnown RBP18.13■□□□□ 0.49
ZNF548-212ENST00000602086 STARD3NLO95772 234 aa18.13■□□□□ 0.49
ZNF548-212ENST00000602086 CAMKK2Q96RR4 588 aa18.13■□□□□ 0.49
ZNF548-212ENST00000602086 ADCY9O60503 1353 aa18.13■□□□□ 0.49
ZNF548-212ENST00000602086 TJP1Q07157 1748 aa18.12■□□□□ 0.49
ZNF548-212ENST00000602086 PI4KAP2A4QPH2 592 aa18.12■□□□□ 0.49
ZNF548-212ENST00000602086 F6X3S4 739 aa18.12■□□□□ 0.49
ZNF548-212ENST00000602086 APBA3O96018 575 aa18.12■□□□□ 0.49
ZNF548-212ENST00000602086 PI4KAP1Q8N8J0 262 aa18.12■□□□□ 0.49
ZNF548-212ENST00000602086 ALDH1L1O75891 902 aa18.11■□□□□ 0.49
ZNF548-212ENST00000602086 GNAI3P08754 354 aa18.11■□□□□ 0.49
ZNF548-212ENST00000602086 FAM196AQ6ZSG2 479 aa18.11■□□□□ 0.49
ZNF548-212ENST00000602086 SYTL4Q96C24 671 aaPredicted RBP18.11■□□□□ 0.49
ZNF548-212ENST00000602086 ANXA1P04083 346 aa18.1■□□□□ 0.49
ZNF548-212ENST00000602086 BEND3Q5T5X7 828 aa18.1■□□□□ 0.49
ZNF548-212ENST00000602086 SLC4A10Q6U841 1118 aa18.1■□□□□ 0.49
ZNF548-212ENST00000602086 SRCIN1Q9C0H9 1055 aa18.1■□□□□ 0.49
ZNF548-212ENST00000602086 NBPF26B4DH59 902 aa18.09■□□□□ 0.49
ZNF548-212ENST00000602086 NBPF14Q5TI25 921 aa18.09■□□□□ 0.49
ZNF548-212ENST00000602086 NBPF10Q6P3W6 841 aaKnown RBP18.09■□□□□ 0.49
ZNF548-212ENST00000602086 RPAP2Q8IXW5 612 aaPredicted RBP18.09■□□□□ 0.49
ZNF548-212ENST00000602086 NBPF15Q8N660 670 aa18.09■□□□□ 0.49
ZNF548-212ENST00000602086 XAGE3Q8WTP9 111 aa18.09■□□□□ 0.49
ZNF548-212ENST00000602086 RBM42Q9BTD8 480 aaKnown RBP18.09■□□□□ 0.49
ZNF548-212ENST00000602086 IGHDP01880 384 aa18.08■□□□□ 0.48
ZNF548-212ENST00000602086 CYP19A1P11511 503 aaPredicted RBP18.08■□□□□ 0.48
ZNF548-212ENST00000602086 ANKRD13DQ6ZTN6 518 aa18.08■□□□□ 0.48
ZNF548-212ENST00000602086 COPS6Q7L5N1 327 aa18.08■□□□□ 0.48
ZNF548-212ENST00000602086 DNAJC10Q8IXB1 793 aa18.08■□□□□ 0.48
ZNF548-212ENST00000602086 LINS1Q8NG48 757 aa18.08■□□□□ 0.48
ZNF548-212ENST00000602086 ACSBG1Q96GR2 724 aa18.08■□□□□ 0.48
ZNF548-212ENST00000602086 SLC4A9Q96Q91 983 aa18.08■□□□□ 0.48
ZNF548-212ENST00000602086 MAP3K2Q9Y2U5 619 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms