RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 CHRNA5P30532 468 aa24.27■■□□□ 1.48
CHMP2A-208ENST00000601220 CNGB1Q14028 1251 aaPredicted RBP24.27■■□□□ 1.48
CHMP2A-208ENST00000601220 NFIXQ14938 502 aa24.27■■□□□ 1.48
CHMP2A-208ENST00000601220 COL15A1P39059 1388 aa24.27■■□□□ 1.48
CHMP2A-208ENST00000601220 CEP350Q5VT06 3117 aa24.25■■□□□ 1.47
CHMP2A-208ENST00000601220 GNAT3A8MTJ3 354 aa24.25■■□□□ 1.47
CHMP2A-208ENST00000601220 DALRD3Q5D0E6 543 aaKnown RBP24.25■■□□□ 1.47
CHMP2A-208ENST00000601220 GAS2L2Q8NHY3 880 aa24.25■■□□□ 1.47
CHMP2A-208ENST00000601220 HSPA6P17066 643 aa24.24■■□□□ 1.47
CHMP2A-208ENST00000601220 EIF5P55010 431 aaKnown RBP24.24■■□□□ 1.47
CHMP2A-208ENST00000601220 ZNF496Q96IT1 587 aaPredicted RBP24.24■■□□□ 1.47
CHMP2A-208ENST00000601220 PHACTR3Q96KR7 559 aa24.24■■□□□ 1.47
CHMP2A-208ENST00000601220 UBR2Q8IWV8 1755 aa24.24■■□□□ 1.47
CHMP2A-208ENST00000601220 ZNF790Q6PG37 636 aa24.23■■□□□ 1.47
CHMP2A-208ENST00000601220 CEMIPQ8WUJ3 1361 aa24.22■■□□□ 1.47
CHMP2A-208ENST00000601220 CANXP27824 592 aaKnown RBP24.22■■□□□ 1.47
CHMP2A-208ENST00000601220 C9orf131Q5VYM1 1079 aa24.22■■□□□ 1.47
CHMP2A-208ENST00000601220 TTC5Q8N0Z6 440 aa24.21■■□□□ 1.47
CHMP2A-208ENST00000601220 RSPH6AQ9H0K4 717 aa24.21■■□□□ 1.47
CHMP2A-208ENST00000601220 VIRMAQ69YN4 1812 aaKnown RBP24.21■■□□□ 1.47
CHMP2A-208ENST00000601220 HEG1Q9ULI3 1381 aa24.2■■□□□ 1.46
CHMP2A-208ENST00000601220 STARD3NLO95772 234 aa24.2■■□□□ 1.46
CHMP2A-208ENST00000601220 TEFQ10587 303 aa24.2■■□□□ 1.46
CHMP2A-208ENST00000601220 ARFGEF1Q9Y6D6 1849 aa24.19■■□□□ 1.46
CHMP2A-208ENST00000601220 SERPINB2P05120 415 aa24.19■■□□□ 1.46
CHMP2A-208ENST00000601220 NRXN2Q9P2S2 1712 aa24.18■■□□□ 1.46
CHMP2A-208ENST00000601220 PRKAR2BP31323 418 aa24.18■■□□□ 1.46
CHMP2A-208ENST00000601220 NMRK2Q9NPI5 230 aa24.18■■□□□ 1.46
CHMP2A-208ENST00000601220 KCNQ3O43525 872 aa24.17■■□□□ 1.46
CHMP2A-208ENST00000601220 TEX13AQ9BXU3 409 aaPredicted RBP24.17■■□□□ 1.46
CHMP2A-208ENST00000601220 A0A087WZG4 1122 aa24.16■■□□□ 1.46
CHMP2A-208ENST00000601220 PPP2R1AP30153 589 aa24.16■■□□□ 1.46
CHMP2A-208ENST00000601220 TOMM70O94826 608 aa24.15■■□□□ 1.46
CHMP2A-208ENST00000601220 CFAP53Q96M91 514 aa24.15■■□□□ 1.46
CHMP2A-208ENST00000601220 SIPA1L3O60292 1781 aaPredicted RBP24.15■■□□□ 1.46
CHMP2A-208ENST00000601220 CARMIL3Q8ND23 1372 aa24.15■■□□□ 1.46
CHMP2A-208ENST00000601220 TBC1D9BQ66K14 1250 aa24.14■■□□□ 1.45
CHMP2A-208ENST00000601220 FMNL2Q96PY5 1086 aa24.14■■□□□ 1.45
CHMP2A-208ENST00000601220 AFDNP55196 1824 aaKnown RBP24.14■■□□□ 1.45
CHMP2A-208ENST00000601220 A1BGP04217 495 aa24.13■■□□□ 1.45
CHMP2A-208ENST00000601220 IL6STP40189 918 aaPredicted RBP24.13■■□□□ 1.45
CHMP2A-208ENST00000601220 RNF181Q9P0P0 153 aa24.13■■□□□ 1.45
CHMP2A-208ENST00000601220 BTBD11A6QL63 1104 aa24.12■■□□□ 1.45
CHMP2A-208ENST00000601220 PRELPP51888 382 aa24.12■■□□□ 1.45
CHMP2A-208ENST00000601220 BICDL1Q6ZP65 573 aa24.12■■□□□ 1.45
CHMP2A-208ENST00000601220 TBC1D2BQ9UPU7 963 aa24.12■■□□□ 1.45
CHMP2A-208ENST00000601220 C2CD5Q86YS7 1000 aa24.11■■□□□ 1.45
CHMP2A-208ENST00000601220 NUDCQ9Y266 331 aa24.11■■□□□ 1.45
CHMP2A-208ENST00000601220 TTLL6Q8N841 843 aa24.1■■□□□ 1.45
CHMP2A-208ENST00000601220 USP16Q9Y5T5 823 aa24.1■■□□□ 1.45
CHMP2A-208ENST00000601220 CAMTA2O94983 1202 aa24.09■■□□□ 1.45
CHMP2A-208ENST00000601220 U2AF1L5P0DN76 240 aaPredicted RBP24.09■■□□□ 1.45
CHMP2A-208ENST00000601220 U2AF1Q01081 240 aaKnown RBP eCLIP24.09■■□□□ 1.45
CHMP2A-208ENST00000601220 RASSF7Q02833 373 aa24.09■■□□□ 1.45
CHMP2A-208ENST00000601220 PRAMEF22A3QJZ6 481 aa24.08■■□□□ 1.45
CHMP2A-208ENST00000601220 H0YIN7 160 aa24.07■■□□□ 1.44
CHMP2A-208ENST00000601220 PRR5LQ6MZQ0 368 aa24.07■■□□□ 1.44
CHMP2A-208ENST00000601220 MCM10Q7L590 875 aa24.07■■□□□ 1.44
CHMP2A-208ENST00000601220 RBM46Q8TBY0 533 aaKnown RBP24.07■■□□□ 1.44
CHMP2A-208ENST00000601220 APLP1P51693 650 aa24.06■■□□□ 1.44
CHMP2A-208ENST00000601220 DNAJC5GQ8N7S2 189 aa24.06■■□□□ 1.44
CHMP2A-208ENST00000601220 BRIP1Q9BX63 1249 aa24.06■■□□□ 1.44
CHMP2A-208ENST00000601220 ZNF330Q9Y3S2 320 aaPredicted RBP24.06■■□□□ 1.44
CHMP2A-208ENST00000601220 CCDC24Q8N4L8 307 aa24.05■■□□□ 1.44
CHMP2A-208ENST00000601220 RRAGCQ9HB90 399 aa24.05■■□□□ 1.44
CHMP2A-208ENST00000601220 DLEC1Q9Y238 1755 aa24.05■■□□□ 1.44
CHMP2A-208ENST00000601220 KDM2BQ8NHM5 1336 aa24.05■■□□□ 1.44
CHMP2A-208ENST00000601220 SCN7AQ01118 1682 aa24.05■■□□□ 1.44
CHMP2A-208ENST00000601220 NFKBIEO00221 500 aa24.04■■□□□ 1.44
CHMP2A-208ENST00000601220 HTATSF1O43719 755 aaKnown RBP24.04■■□□□ 1.44
CHMP2A-208ENST00000601220 DCTN1Q14203 1278 aa24.04■■□□□ 1.44
CHMP2A-208ENST00000601220 SBF1O95248 1867 aa24.04■■□□□ 1.44
CHMP2A-208ENST00000601220 ZC3H4Q9UPT8 1303 aaKnown RBP24.04■■□□□ 1.44
CHMP2A-208ENST00000601220 LMNB1P20700 586 aa24.03■■□□□ 1.44
CHMP2A-208ENST00000601220 PIP4K2AP48426 406 aaPredicted RBP24.03■■□□□ 1.44
CHMP2A-208ENST00000601220 RTF1Q92541 710 aaKnown RBP24.03■■□□□ 1.44
CHMP2A-208ENST00000601220 PDZRN3Q9UPQ7 1066 aa24.03■■□□□ 1.44
CHMP2A-208ENST00000601220 SNRPA1P09661 255 aaKnown RBP24.02■■□□□ 1.44
CHMP2A-208ENST00000601220 PDE6BP35913 854 aa24.02■■□□□ 1.44
CHMP2A-208ENST00000601220 DZIP3Q86Y13 1208 aaKnown RBP24.02■■□□□ 1.44
CHMP2A-208ENST00000601220 SETDB2Q96T68 719 aa24.02■■□□□ 1.44
CHMP2A-208ENST00000601220 ANKRD31Q8N7Z5 1873 aa24■■□□□ 1.43
CHMP2A-208ENST00000601220 NBPF26B4DH59 902 aa24■■□□□ 1.43
CHMP2A-208ENST00000601220 NBPF10Q6P3W6 841 aaKnown RBP24■■□□□ 1.43
CHMP2A-208ENST00000601220 NBPF15Q8N660 670 aa24■■□□□ 1.43
CHMP2A-208ENST00000601220 ZNF622Q969S3 477 aaKnown RBP eCLIP24■■□□□ 1.434e-9■■□□□ 11.9
CHMP2A-208ENST00000601220 FSTL1Q12841 308 aa23.99■■□□□ 1.43
CHMP2A-208ENST00000601220 CLEC4GQ6UXB4 293 aa23.99■■□□□ 1.43
CHMP2A-208ENST00000601220 GLTPD2A6NH11 291 aa23.98■■□□□ 1.43
CHMP2A-208ENST00000601220 C16orf71Q8IYS4 520 aaPredicted RBP23.98■■□□□ 1.43
CHMP2A-208ENST00000601220 CNBD1Q8NA66 436 aa23.98■■□□□ 1.43
CHMP2A-208ENST00000601220 C21orf2O43822 256 aa23.97■■□□□ 1.43
CHMP2A-208ENST00000601220 TAF7Q15545 349 aaPredicted RBP23.97■■□□□ 1.43
CHMP2A-208ENST00000601220 NPM2Q86SE8 214 aaKnown RBP23.97■■□□□ 1.43
CHMP2A-208ENST00000601220 PLEKHF1Q96S99 279 aa23.97■■□□□ 1.43
CHMP2A-208ENST00000601220 SRGNP10124 158 aa23.96■■□□□ 1.43
CHMP2A-208ENST00000601220 MIS18AQ9NYP9 233 aa23.96■■□□□ 1.43
CHMP2A-208ENST00000601220 IFFO2Q5TF58 517 aa23.95■■□□□ 1.42
CHMP2A-208ENST00000601220 STYK1Q6J9G0 422 aa23.95■■□□□ 1.42
CHMP2A-208ENST00000601220 COL11A2P13942 1736 aaPredicted RBP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms