RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 TEFQ10587 303 aa22.81■■□□□ 1.24
SCAF1-204ENST00000601038 ZNF526Q8TF50 670 aaPredicted RBP22.81■■□□□ 1.24
SCAF1-204ENST00000601038 PIM2Q9P1W9 311 aa22.81■■□□□ 1.24
SCAF1-204ENST00000601038 COL15A1P39059 1388 aa22.8■■□□□ 1.24
SCAF1-204ENST00000601038 ARHGAP27Q6ZUM4 889 aa22.8■■□□□ 1.24
SCAF1-204ENST00000601038 STARD3NLO95772 234 aa22.79■■□□□ 1.24
SCAF1-204ENST00000601038 ZNF790Q6PG37 636 aa22.79■■□□□ 1.24
SCAF1-204ENST00000601038 NUDCQ9Y266 331 aa22.79■■□□□ 1.24
SCAF1-204ENST00000601038 UBR2Q8IWV8 1755 aa22.78■■□□□ 1.24
SCAF1-204ENST00000601038 PRKAR2BP31323 418 aa22.78■■□□□ 1.24
SCAF1-204ENST00000601038 BRCA1P38398 1863 aaKnown RBP22.78■■□□□ 1.24
SCAF1-204ENST00000601038 ZNF496Q96IT1 587 aaPredicted RBP22.78■■□□□ 1.24
SCAF1-204ENST00000601038 PHACTR3Q96KR7 559 aa22.78■■□□□ 1.24
SCAF1-204ENST00000601038 TEX13AQ9BXU3 409 aaPredicted RBP22.78■■□□□ 1.24
SCAF1-204ENST00000601038 RSPH6AQ9H0K4 717 aa22.78■■□□□ 1.24
SCAF1-204ENST00000601038 CANXP27824 592 aaKnown RBP22.77■■□□□ 1.24
SCAF1-204ENST00000601038 PPP2R1AP30153 589 aa22.77■■□□□ 1.24
SCAF1-204ENST00000601038 NFIXQ14938 502 aa22.77■■□□□ 1.24
SCAF1-204ENST00000601038 CEMIPQ8WUJ3 1361 aa22.76■■□□□ 1.23
SCAF1-204ENST00000601038 DALRD3Q5D0E6 543 aaKnown RBP22.76■■□□□ 1.23
SCAF1-204ENST00000601038 BCL2L12Q9HB09 334 aa22.76■■□□□ 1.23
SCAF1-204ENST00000601038 HEG1Q9ULI3 1381 aa22.76■■□□□ 1.23
SCAF1-204ENST00000601038 EIF5P55010 431 aaKnown RBP22.75■■□□□ 1.23
SCAF1-204ENST00000601038 A0A087WZG4 1122 aa22.74■■□□□ 1.23
SCAF1-204ENST00000601038 CHRNA5P30532 468 aa22.74■■□□□ 1.23
SCAF1-204ENST00000601038 U2AF1L5P0DN76 240 aaPredicted RBP22.73■■□□□ 1.23
SCAF1-204ENST00000601038 U2AF1Q01081 240 aaKnown RBP eCLIP22.73■■□□□ 1.23
SCAF1-204ENST00000601038 FMNL2Q96PY5 1086 aa22.73■■□□□ 1.23
SCAF1-204ENST00000601038 ARFGEF1Q9Y6D6 1849 aa22.73■■□□□ 1.23
SCAF1-204ENST00000601038 SIPA1L3O60292 1781 aaPredicted RBP22.72■■□□□ 1.23
SCAF1-204ENST00000601038 SERPINB2P05120 415 aa22.72■■□□□ 1.23
SCAF1-204ENST00000601038 BTBD11A6QL63 1104 aa22.71■■□□□ 1.23
SCAF1-204ENST00000601038 KIF3CO14782 793 aa22.71■■□□□ 1.23
SCAF1-204ENST00000601038 AFDNP55196 1824 aaKnown RBP22.69■■□□□ 1.22
SCAF1-204ENST00000601038 IL6STP40189 918 aaPredicted RBP22.69■■□□□ 1.22
SCAF1-204ENST00000601038 C9orf131Q5VYM1 1079 aa22.69■■□□□ 1.22
SCAF1-204ENST00000601038 NRXN2Q9P2S2 1712 aa22.68■■□□□ 1.22
SCAF1-204ENST00000601038 KCNQ3O43525 872 aa22.68■■□□□ 1.22
SCAF1-204ENST00000601038 RTF1Q92541 710 aaKnown RBP22.68■■□□□ 1.22
SCAF1-204ENST00000601038 A1BGP04217 495 aa22.67■■□□□ 1.22
SCAF1-204ENST00000601038 BICDL1Q6ZP65 573 aa22.67■■□□□ 1.22
SCAF1-204ENST00000601038 HSPA6P17066 643 aa22.66■■□□□ 1.22
SCAF1-204ENST00000601038 TBC1D2BQ9UPU7 963 aa22.66■■□□□ 1.22
SCAF1-204ENST00000601038 ZNF330Q9Y3S2 320 aaPredicted RBP22.66■■□□□ 1.22
SCAF1-204ENST00000601038 HTATSF1O43719 755 aaKnown RBP22.65■■□□□ 1.22
SCAF1-204ENST00000601038 TBC1D9BQ66K14 1250 aa22.65■■□□□ 1.22
SCAF1-204ENST00000601038 MCM10Q7L590 875 aa22.65■■□□□ 1.22
SCAF1-204ENST00000601038 NPM2Q86SE8 214 aaKnown RBP22.65■■□□□ 1.22
SCAF1-204ENST00000601038 USP16Q9Y5T5 823 aa22.64■■□□□ 1.21
SCAF1-204ENST00000601038 C2CD5Q86YS7 1000 aa22.63■■□□□ 1.21
SCAF1-204ENST00000601038 TTLL6Q8N841 843 aa22.63■■□□□ 1.21
SCAF1-204ENST00000601038 RNF181Q9P0P0 153 aa22.63■■□□□ 1.21
SCAF1-204ENST00000601038 H0YIN7 160 aa22.62■■□□□ 1.21
SCAF1-204ENST00000601038 TOMM70O94826 608 aa22.62■■□□□ 1.21
SCAF1-204ENST00000601038 SNRPA1P09661 255 aaKnown RBP22.62■■□□□ 1.21
SCAF1-204ENST00000601038 NMRK2Q9NPI5 230 aa22.62■■□□□ 1.21
SCAF1-204ENST00000601038 CAMTA2O94983 1202 aa22.61■■□□□ 1.21
SCAF1-204ENST00000601038 DCTN1Q14203 1278 aa22.61■■□□□ 1.21
SCAF1-204ENST00000601038 PDZRN3Q9UPQ7 1066 aa22.61■■□□□ 1.21
SCAF1-204ENST00000601038 CARMIL3Q8ND23 1372 aa22.61■■□□□ 1.21
SCAF1-204ENST00000601038 BRIP1Q9BX63 1249 aa22.6■■□□□ 1.21
SCAF1-204ENST00000601038 SCN7AQ01118 1682 aa22.59■■□□□ 1.21
SCAF1-204ENST00000601038 DLEC1Q9Y238 1755 aa22.59■■□□□ 1.21
SCAF1-204ENST00000601038 PRAMEF22A3QJZ6 481 aa22.59■■□□□ 1.21
SCAF1-204ENST00000601038 PDE6BP35913 854 aa22.59■■□□□ 1.21
SCAF1-204ENST00000601038 TAF7Q15545 349 aaPredicted RBP22.59■■□□□ 1.21
SCAF1-204ENST00000601038 PRR5LQ6MZQ0 368 aa22.59■■□□□ 1.21
SCAF1-204ENST00000601038 DZIP3Q86Y13 1208 aaKnown RBP22.59■■□□□ 1.21
SCAF1-204ENST00000601038 SETDB2Q96T68 719 aa22.59■■□□□ 1.21
SCAF1-204ENST00000601038 SBF1O95248 1867 aa22.59■■□□□ 1.21
SCAF1-204ENST00000601038 NEFMP07197 916 aa22.58■■□□□ 1.21
SCAF1-204ENST00000601038 KDM2BQ8NHM5 1336 aa22.57■■□□□ 1.2
SCAF1-204ENST00000601038 PIP4K2AP48426 406 aaPredicted RBP22.56■■□□□ 1.2
SCAF1-204ENST00000601038 RASSF7Q02833 373 aa22.56■■□□□ 1.2
SCAF1-204ENST00000601038 CLEC4GQ6UXB4 293 aa22.56■■□□□ 1.2
SCAF1-204ENST00000601038 ZC3H4Q9UPT8 1303 aaKnown RBP22.56■■□□□ 1.2
SCAF1-204ENST00000601038 LMNB1P20700 586 aa22.55■■□□□ 1.2
SCAF1-204ENST00000601038 CNBD1Q8NA66 436 aa22.55■■□□□ 1.2
SCAF1-204ENST00000601038 ZNF622Q969S3 477 aaKnown RBP eCLIP22.55■■□□□ 1.2
SCAF1-204ENST00000601038 PLEKHF1Q96S99 279 aa22.55■■□□□ 1.2
SCAF1-204ENST00000601038 CCDC24Q8N4L8 307 aa22.54■■□□□ 1.2
SCAF1-204ENST00000601038 RBM46Q8TBY0 533 aaKnown RBP22.54■■□□□ 1.2
SCAF1-204ENST00000601038 ANKRD31Q8N7Z5 1873 aa22.54■■□□□ 1.2
SCAF1-204ENST00000601038 NBPF26B4DH59 902 aa22.53■■□□□ 1.2
SCAF1-204ENST00000601038 NPHP1O15259 732 aa22.53■■□□□ 1.2
SCAF1-204ENST00000601038 NBPF10Q6P3W6 841 aaKnown RBP22.53■■□□□ 1.2
SCAF1-204ENST00000601038 C16orf71Q8IYS4 520 aaPredicted RBP22.53■■□□□ 1.2
SCAF1-204ENST00000601038 NBPF15Q8N660 670 aa22.53■■□□□ 1.2
SCAF1-204ENST00000601038 MIS18AQ9NYP9 233 aa22.53■■□□□ 1.2
SCAF1-204ENST00000601038 RGL2O15211 777 aa22.52■■□□□ 1.2
SCAF1-204ENST00000601038 APLP1P51693 650 aa22.52■■□□□ 1.2
SCAF1-204ENST00000601038 PRELPP51888 382 aa22.52■■□□□ 1.2
SCAF1-204ENST00000601038 ST5P78524 1137 aa22.52■■□□□ 1.2
SCAF1-204ENST00000601038 PNISRQ8TF01 805 aaKnown RBP22.52■■□□□ 1.2
SCAF1-204ENST00000601038 PNNQ9H307 717 aaKnown RBP22.52■■□□□ 1.2
SCAF1-204ENST00000601038 ZNF652Q9Y2D9 606 aa22.52■■□□□ 1.2
SCAF1-204ENST00000601038 BCORQ6W2J9 1755 aa22.51■■□□□ 1.19
SCAF1-204ENST00000601038 RRAGCQ9HB90 399 aa22.51■■□□□ 1.19
SCAF1-204ENST00000601038 NFKBIEO00221 500 aa22.5■■□□□ 1.19
SCAF1-204ENST00000601038 NFE2L2Q16236 605 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms