RNA–Protein interactions for RNA: ENST00000600940.1

USP29-204, Transcript of ubiquitin specific peptidase 29, humanhuman

TSL 4

Gene USP29, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-204ENST00000600940 DDR1Q08345 913 aa18.66■□□□□ 0.58
USP29-204ENST00000600940 TEFQ10587 303 aa18.66■□□□□ 0.58
USP29-204ENST00000600940 DALRD3Q5D0E6 543 aaKnown RBP18.66■□□□□ 0.58
USP29-204ENST00000600940 CANXP27824 592 aaKnown RBP18.65■□□□□ 0.58
USP29-204ENST00000600940 FOXD4L1Q9NU39 408 aa18.65■□□□□ 0.58
USP29-204ENST00000600940 KIAA1551Q9HCM1 1747 aa18.65■□□□□ 0.58
USP29-204ENST00000600940 HSPA6P17066 643 aa18.64■□□□□ 0.57
USP29-204ENST00000600940 CFAP53Q96M91 514 aa18.64■□□□□ 0.57
USP29-204ENST00000600940 SOS1Q07889 1333 aaPredicted RBP18.64■□□□□ 0.57
USP29-204ENST00000600940 GNAT3A8MTJ3 354 aa18.63■□□□□ 0.57
USP29-204ENST00000600940 POLRMTO00411 1230 aaKnown RBP18.63■□□□□ 0.57
USP29-204ENST00000600940 STARD3NLO95772 234 aa18.63■□□□□ 0.57
USP29-204ENST00000600940 CHRNA5P30532 468 aa18.63■□□□□ 0.57
USP29-204ENST00000600940 CACNB1Q02641 598 aaPredicted RBP18.63■□□□□ 0.57
USP29-204ENST00000600940 NPM2Q86SE8 214 aaKnown RBP18.63■□□□□ 0.57
USP29-204ENST00000600940 GAS2L2Q8NHY3 880 aa18.63■□□□□ 0.57
USP29-204ENST00000600940 NARFQ9UHQ1 456 aa18.63■□□□□ 0.57
USP29-204ENST00000600940 ZBTB1Q9Y2K1 713 aa18.63■□□□□ 0.57
USP29-204ENST00000600940 ZNF330Q9Y3S2 320 aaPredicted RBP18.63■□□□□ 0.57
USP29-204ENST00000600940 COL15A1P39059 1388 aa18.63■□□□□ 0.57
USP29-204ENST00000600940 KCNA3P22001 575 aa18.62■□□□□ 0.57
USP29-204ENST00000600940 TM4SF1P30408 202 aa18.62■□□□□ 0.57
USP29-204ENST00000600940 C9orf131Q5VYM1 1079 aa18.62■□□□□ 0.57
USP29-204ENST00000600940 VSIG10Q8N0Z9 540 aa18.62■□□□□ 0.57
USP29-204ENST00000600940 MRC1P22897 1456 aa18.62■□□□□ 0.57
USP29-204ENST00000600940 KIF3CO14782 793 aa18.61■□□□□ 0.57
USP29-204ENST00000600940 C16orf71Q8IYS4 520 aaPredicted RBP18.61■□□□□ 0.57
USP29-204ENST00000600940 BRCA1P38398 1863 aaKnown RBP18.6■□□□□ 0.57
USP29-204ENST00000600940 NFIXQ14938 502 aa18.6■□□□□ 0.57
USP29-204ENST00000600940 BICDL1Q6ZP65 573 aa18.6■□□□□ 0.57
USP29-204ENST00000600940 KCPQ6ZWJ8 1503 aa18.59■□□□□ 0.57
USP29-204ENST00000600940 NPC1L1Q9UHC9 1359 aa18.59■□□□□ 0.57
USP29-204ENST00000600940 ARFGEF1Q9Y6D6 1849 aa18.59■□□□□ 0.57
USP29-204ENST00000600940 A0A087WZG4 1122 aa18.59■□□□□ 0.57
USP29-204ENST00000600940 RNF181Q9P0P0 153 aa18.59■□□□□ 0.57
USP29-204ENST00000600940 NUDCQ9Y266 331 aa18.59■□□□□ 0.57
USP29-204ENST00000600940 SERPINB2P05120 415 aa18.58■□□□□ 0.56
USP29-204ENST00000600940 TEX13AQ9BXU3 409 aaPredicted RBP18.58■□□□□ 0.56
USP29-204ENST00000600940 NPHP1O15259 732 aa18.57■□□□□ 0.56
USP29-204ENST00000600940 TOMM70O94826 608 aa18.57■□□□□ 0.56
USP29-204ENST00000600940 ZNF790Q6PG37 636 aa18.57■□□□□ 0.56
USP29-204ENST00000600940 IL17REQ8NFR9 667 aa18.57■□□□□ 0.56
USP29-204ENST00000600940 ZNF496Q96IT1 587 aaPredicted RBP18.57■□□□□ 0.56
USP29-204ENST00000600940 NMRK2Q9NPI5 230 aa18.57■□□□□ 0.56
USP29-204ENST00000600940 KDM2BQ8NHM5 1336 aa18.56■□□□□ 0.56
USP29-204ENST00000600940 PRKAR2BP31323 418 aa18.56■□□□□ 0.56
USP29-204ENST00000600940 FMNL2Q96PY5 1086 aa18.56■□□□□ 0.56
USP29-204ENST00000600940 ADAMTS7Q9UKP4 1686 aa18.55■□□□□ 0.56
USP29-204ENST00000600940 COL3A1P02461 1466 aaPredicted RBP18.55■□□□□ 0.56
USP29-204ENST00000600940 BTBD11A6QL63 1104 aa18.55■□□□□ 0.56
USP29-204ENST00000600940 H0YIN7 160 aa18.55■□□□□ 0.56
USP29-204ENST00000600940 C2CD5Q86YS7 1000 aa18.55■□□□□ 0.56
USP29-204ENST00000600940 RTF1Q92541 710 aaKnown RBP18.55■□□□□ 0.56
USP29-204ENST00000600940 AFDNP55196 1824 aaKnown RBP18.55■□□□□ 0.56
USP29-204ENST00000600940 HEG1Q9ULI3 1381 aa18.55■□□□□ 0.56
USP29-204ENST00000600940 U2AF1L5P0DN76 240 aaPredicted RBP18.54■□□□□ 0.56
USP29-204ENST00000600940 EIF5P55010 431 aaKnown RBP18.54■□□□□ 0.56
USP29-204ENST00000600940 U2AF1Q01081 240 aaKnown RBP eCLIP18.54■□□□□ 0.56
USP29-204ENST00000600940 BCL2L12Q9HB09 334 aa18.54■□□□□ 0.56
USP29-204ENST00000600940 TBC1D2BQ9UPU7 963 aa18.54■□□□□ 0.56
USP29-204ENST00000600940 UBR2Q8IWV8 1755 aa18.54■□□□□ 0.56
USP29-204ENST00000600940 APLP1P51693 650 aa18.53■□□□□ 0.56
USP29-204ENST00000600940 TTLL6Q8N841 843 aa18.53■□□□□ 0.56
USP29-204ENST00000600940 MYCNP04198 464 aaPredicted RBP18.52■□□□□ 0.56
USP29-204ENST00000600940 ZNF622Q969S3 477 aaKnown RBP eCLIP18.52■□□□□ 0.56
USP29-204ENST00000600940 PHACTR3Q96KR7 559 aa18.52■□□□□ 0.56
USP29-204ENST00000600940 RASSF7Q02833 373 aa18.51■□□□□ 0.55
USP29-204ENST00000600940 TBC1D9BQ66K14 1250 aa18.51■□□□□ 0.55
USP29-204ENST00000600940 RSPH6AQ9H0K4 717 aa18.51■□□□□ 0.55
USP29-204ENST00000600940 A1BGP04217 495 aa18.5■□□□□ 0.55
USP29-204ENST00000600940 IL6STP40189 918 aaPredicted RBP18.5■□□□□ 0.55
USP29-204ENST00000600940 RRAGCQ9HB90 399 aa18.5■□□□□ 0.55
USP29-204ENST00000600940 NEFMP07197 916 aa18.49■□□□□ 0.55
USP29-204ENST00000600940 PPP2R1AP30153 589 aa18.49■□□□□ 0.55
USP29-204ENST00000600940 PDE6BP35913 854 aa18.49■□□□□ 0.55
USP29-204ENST00000600940 CCDC24Q8N4L8 307 aa18.49■□□□□ 0.55
USP29-204ENST00000600940 SETDB2Q96T68 719 aa18.49■□□□□ 0.55
USP29-204ENST00000600940 ZNF219Q9P2Y4 722 aaPredicted RBP18.49■□□□□ 0.55
USP29-204ENST00000600940 SBF1O95248 1867 aa18.49■□□□□ 0.55
USP29-204ENST00000600940 ZBTB22O15209 634 aa18.48■□□□□ 0.55
USP29-204ENST00000600940 KCNQ3O43525 872 aa18.48■□□□□ 0.55
USP29-204ENST00000600940 LMNB1P20700 586 aa18.48■□□□□ 0.55
USP29-204ENST00000600940 RBM46Q8TBY0 533 aaKnown RBP18.48■□□□□ 0.55
USP29-204ENST00000600940 SIPA1L3O60292 1781 aaPredicted RBP18.47■□□□□ 0.55
USP29-204ENST00000600940 CARMIL3Q8ND23 1372 aa18.47■□□□□ 0.55
USP29-204ENST00000600940 NRXN2Q9P2S2 1712 aa18.47■□□□□ 0.55
USP29-204ENST00000600940 MCM10Q7L590 875 aa18.47■□□□□ 0.55
USP29-204ENST00000600940 DZIP3Q86Y13 1208 aaKnown RBP18.47■□□□□ 0.55
USP29-204ENST00000600940 BRIP1Q9BX63 1249 aa18.47■□□□□ 0.55
USP29-204ENST00000600940 CEMIPQ8WUJ3 1361 aa18.46■□□□□ 0.55
USP29-204ENST00000600940 PIP4K2AP48426 406 aaPredicted RBP18.46■□□□□ 0.55
USP29-204ENST00000600940 ST5P78524 1137 aa18.46■□□□□ 0.55
USP29-204ENST00000600940 CNBD1Q8NA66 436 aa18.46■□□□□ 0.55
USP29-204ENST00000600940 PDZRN3Q9UPQ7 1066 aa18.46■□□□□ 0.55
USP29-204ENST00000600940 PRR5LQ6MZQ0 368 aa18.45■□□□□ 0.54
USP29-204ENST00000600940 USP16Q9Y5T5 823 aa18.45■□□□□ 0.54
USP29-204ENST00000600940 DLEC1Q9Y238 1755 aa18.45■□□□□ 0.54
USP29-204ENST00000600940 SNRPA1P09661 255 aaKnown RBP18.44■□□□□ 0.54
USP29-204ENST00000600940 FSTL1Q12841 308 aa18.44■□□□□ 0.54
USP29-204ENST00000600940 DCTN1Q14203 1278 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms