RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 LRRC4BQ9NT99 713 aa26.29■■□□□ 1.8
PNKP-215ENST00000600910 CYP19A1P11511 503 aaPredicted RBP26.28■■□□□ 1.8
PNKP-215ENST00000600910 CHMP4AQ9BY43 222 aa26.28■■□□□ 1.8
PNKP-215ENST00000600910 COL5A3P25940 1745 aaPredicted RBP26.28■■□□□ 1.8
PNKP-215ENST00000600910 BAG6P46379 1132 aa26.28■■□□□ 1.8
PNKP-215ENST00000600910 EN1Q05925 392 aaPredicted RBP26.28■■□□□ 1.8
PNKP-215ENST00000600910 LINC00116Q8NCU8 138 aa26.28■■□□□ 1.8
PNKP-215ENST00000600910 SSH1Q8WYL5 1049 aa26.28■■□□□ 1.8
PNKP-215ENST00000600910 BCL2L13Q9BXK5 485 aa26.28■■□□□ 1.8
PNKP-215ENST00000600910 ALDH1L2Q3SY69 923 aa26.27■■□□□ 1.8
PNKP-215ENST00000600910 CHPF2Q9P2E5 772 aa26.27■■□□□ 1.8
PNKP-215ENST00000600910 A1BGP04217 495 aa26.26■■□□□ 1.79
PNKP-215ENST00000600910 STK31Q9BXU1 1019 aa26.26■■□□□ 1.79
PNKP-215ENST00000600910 TAF1LQ8IZX4 1826 aa26.26■■□□□ 1.79
PNKP-215ENST00000600910 DEFB132Q7Z7B7 95 aa26.25■■□□□ 1.79
PNKP-215ENST00000600910 CAMKK2Q96RR4 588 aa26.25■■□□□ 1.79
PNKP-215ENST00000600910 SMC4Q9NTJ3 1288 aa26.25■■□□□ 1.79
PNKP-215ENST00000600910 PIP4K2AP48426 406 aaPredicted RBP26.25■■□□□ 1.79
PNKP-215ENST00000600910 EZH2Q15910 746 aaKnown RBP26.25■■□□□ 1.79
PNKP-215ENST00000600910 UPF1Q92900 1129 aaKnown RBP eCLIP26.25■■□□□ 1.79
PNKP-215ENST00000600910 DBF4Q9UBU7 674 aaPredicted RBP26.25■■□□□ 1.79
PNKP-215ENST00000600910 BCAR3O75815 825 aa26.24■■□□□ 1.79
PNKP-215ENST00000600910 CRKLP46109 303 aaKnown RBP26.24■■□□□ 1.79
PNKP-215ENST00000600910 ANXA1P04083 346 aa26.23■■□□□ 1.79
PNKP-215ENST00000600910 SLC4A2P04920 1241 aa26.23■■□□□ 1.79
PNKP-215ENST00000600910 PDIA6Q15084 440 aa26.23■■□□□ 1.79
PNKP-215ENST00000600910 ERBB4Q15303 1308 aa26.23■■□□□ 1.79
PNKP-215ENST00000600910 PROSER3Q2NL68 480 aa26.22■■□□□ 1.79
PNKP-215ENST00000600910 DDX21Q9NR30 783 aaKnown RBP eCLIP26.22■■□□□ 1.79
PNKP-215ENST00000600910 CCDC87Q9NVE4 849 aa26.22■■□□□ 1.79
PNKP-215ENST00000600910 NBPF26B4DH59 902 aa26.21■■□□□ 1.79
PNKP-215ENST00000600910 MYL6BP14649 208 aa26.21■■□□□ 1.79
PNKP-215ENST00000600910 NBPF14Q5TI25 921 aa26.21■■□□□ 1.79
PNKP-215ENST00000600910 NBPF10Q6P3W6 841 aaKnown RBP26.21■■□□□ 1.79
PNKP-215ENST00000600910 INTS5Q6P9B9 1019 aaKnown RBP26.21■■□□□ 1.79
PNKP-215ENST00000600910 MRPL50Q8N5N7 158 aaKnown RBP26.21■■□□□ 1.79
PNKP-215ENST00000600910 NBPF15Q8N660 670 aa26.21■■□□□ 1.79
PNKP-215ENST00000600910 ZBTB1Q9Y2K1 713 aa26.21■■□□□ 1.79
PNKP-215ENST00000600910 C4BP0C0L5 1744 aa26.21■■□□□ 1.79
PNKP-215ENST00000600910 CNTNAP4Q9C0A0 1308 aa26.21■■□□□ 1.79
PNKP-215ENST00000600910 MYH14Q7Z406 1995 aaKnown RBP26.2■■□□□ 1.79
PNKP-215ENST00000600910 RREB1Q92766 1687 aa26.2■■□□□ 1.78
PNKP-215ENST00000600910 CANXP27824 592 aaKnown RBP26.2■■□□□ 1.78
PNKP-215ENST00000600910 RC3H1Q5TC82 1133 aaKnown RBP26.18■■□□□ 1.78
PNKP-215ENST00000600910 HYPKQ9NX55 129 aa26.18■■□□□ 1.78
PNKP-215ENST00000600910 CACNA1FO60840 1977 aa26.18■■□□□ 1.78
PNKP-215ENST00000600910 HMGB2P26583 209 aaKnown RBP26.17■■□□□ 1.78
PNKP-215ENST00000600910 BRPF1P55201 1214 aaPredicted RBP26.17■■□□□ 1.78
PNKP-215ENST00000600910 LRP10Q7Z4F1 713 aa26.17■■□□□ 1.78
PNKP-215ENST00000600910 PHAXQ9H814 394 aaKnown RBP26.17■■□□□ 1.78
PNKP-215ENST00000600910 G2E3Q7L622 706 aa26.17■■□□□ 1.78
PNKP-215ENST00000600910 ZNF330Q9Y3S2 320 aaPredicted RBP26.16■■□□□ 1.78
PNKP-215ENST00000600910 IL6STP40189 918 aaPredicted RBP26.15■■□□□ 1.78
PNKP-215ENST00000600910 AK7Q96M32 723 aa26.15■■□□□ 1.78
PNKP-215ENST00000600910 KIF16BQ96L93 1317 aa26.15■■□□□ 1.78
PNKP-215ENST00000600910 GNPATO15228 680 aa26.14■■□□□ 1.78
PNKP-215ENST00000600910 FRAT1Q92837 279 aaPredicted RBP26.14■■□□□ 1.78
PNKP-215ENST00000600910 NOB1Q9ULX3 412 aaKnown RBP26.14■■□□□ 1.78
PNKP-215ENST00000600910 FLIIQ13045 1269 aa26.14■■□□□ 1.77
PNKP-215ENST00000600910 EIF5P55010 431 aaKnown RBP26.13■■□□□ 1.77
PNKP-215ENST00000600910 AIMP1Q12904 312 aaKnown RBP26.13■■□□□ 1.77
PNKP-215ENST00000600910 NUP188Q5SRE5 1749 aa26.13■■□□□ 1.77
PNKP-215ENST00000600910 RPS6KA4O75676 772 aa26.12■■□□□ 1.77
PNKP-215ENST00000600910 COPS6Q7L5N1 327 aa26.12■■□□□ 1.77
PNKP-215ENST00000600910 XAGE3Q8WTP9 111 aa26.12■■□□□ 1.77
PNKP-215ENST00000600910 SUPT16HQ9Y5B9 1047 aaKnown RBP26.12■■□□□ 1.77
PNKP-215ENST00000600910 RTCBQ9Y3I0 505 aaKnown RBP26.11■■□□□ 1.77
PNKP-215ENST00000600910 ZNF827Q17R98 1081 aa26.1■■□□□ 1.77
PNKP-215ENST00000600910 NPM2Q86SE8 214 aaKnown RBP26.1■■□□□ 1.77
PNKP-215ENST00000600910 AKT1S1Q96B36 256 aa26.1■■□□□ 1.77
PNKP-215ENST00000600910 FKBP5Q13451 457 aaPredicted RBP26.1■■□□□ 1.77
PNKP-215ENST00000600910 SMIM5Q71RC9 77 aa26.1■■□□□ 1.77
PNKP-215ENST00000600910 AMIGO3Q86WK7 504 aa26.1■■□□□ 1.77
PNKP-215ENST00000600910 PTPRCP08575 1304 aa26.09■■□□□ 1.77
PNKP-215ENST00000600910 COL15A1P39059 1388 aa26.09■■□□□ 1.77
PNKP-215ENST00000600910 PLIN1O60240 522 aa26.09■■□□□ 1.77
PNKP-215ENST00000600910 UBR3Q6ZT12 1888 aa26.08■■□□□ 1.77
PNKP-215ENST00000600910 IPO8O15397 1037 aaKnown RBP26.08■■□□□ 1.77
PNKP-215ENST00000600910 RRP1P56182 461 aaKnown RBP26.08■■□□□ 1.77
PNKP-215ENST00000600910 TTLL7Q6ZT98 887 aa26.08■■□□□ 1.77
PNKP-215ENST00000600910 ZKSCAN2Q63HK3 967 aa26.07■■□□□ 1.76
PNKP-215ENST00000600910 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.07■■□□□ 1.76
PNKP-215ENST00000600910 ARXQ96QS3 562 aa26.07■■□□□ 1.76
PNKP-215ENST00000600910 ANO8Q9HCE9 1232 aaPredicted RBP26.07■■□□□ 1.76
PNKP-215ENST00000600910 PHF14O94880 888 aa26.06■■□□□ 1.76
PNKP-215ENST00000600910 ARHGAP45Q92619 1136 aa26.06■■□□□ 1.76
PNKP-215ENST00000600910 TFCP2L1Q9NZI6 479 aa26.06■■□□□ 1.76
PNKP-215ENST00000600910 DDX58O95786 925 aaKnown RBP26.06■■□□□ 1.76
PNKP-215ENST00000600910 ATF7IPQ6VMQ6 1270 aa26.06■■□□□ 1.76
PNKP-215ENST00000600910 DZIP3Q86Y13 1208 aaKnown RBP26.06■■□□□ 1.76
PNKP-215ENST00000600910 RNF123Q5XPI4 1314 aa26.06■■□□□ 1.76
PNKP-215ENST00000600910 TRIM27P14373 513 aa26.05■■□□□ 1.76
PNKP-215ENST00000600910 TBC1D2BQ9UPU7 963 aa26.05■■□□□ 1.76
PNKP-215ENST00000600910 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.04■■□□□ 1.76
PNKP-215ENST00000600910 PI4KAP2A4QPH2 592 aa26.04■■□□□ 1.76
PNKP-215ENST00000600910 SSFA2P28290 1259 aa26.04■■□□□ 1.76
PNKP-215ENST00000600910 KIF6Q6ZMV9 814 aa26.04■■□□□ 1.76
PNKP-215ENST00000600910 ANKRD13DQ6ZTN6 518 aa26.04■■□□□ 1.76
PNKP-215ENST00000600910 PI4KAP1Q8N8J0 262 aa26.04■■□□□ 1.76
PNKP-215ENST00000600910 API5Q9BZZ5 524 aaKnown RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms