RNA–Protein interactions for RNA: ENST00000600872.5

FKRP-223, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-223ENST00000600872 MCM10Q7L590 875 aa17.06■□□□□ 0.32
FKRP-223ENST00000600872 PELP1Q8IZL8 1130 aaKnown RBP17.06■□□□□ 0.32
FKRP-223ENST00000600872 NRXN2Q9P2S2 1712 aa17.06■□□□□ 0.32
FKRP-223ENST00000600872 COL15A1P39059 1388 aa17.05■□□□□ 0.32
FKRP-223ENST00000600872 DDX10Q13206 875 aaKnown RBP17.05■□□□□ 0.32
FKRP-223ENST00000600872 DCTN1Q14203 1278 aa17.05■□□□□ 0.32
FKRP-223ENST00000600872 HTATSF1O43719 755 aaKnown RBP17.04■□□□□ 0.32
FKRP-223ENST00000600872 GRIN3BO60391 1043 aa17.04■□□□□ 0.32
FKRP-223ENST00000600872 EIF5P55010 431 aaKnown RBP17.04■□□□□ 0.32
FKRP-223ENST00000600872 TTC5Q8N0Z6 440 aa17.04■□□□□ 0.32
FKRP-223ENST00000600872 NARFQ9UHQ1 456 aa17.04■□□□□ 0.32
FKRP-223ENST00000600872 BTBD11A6QL63 1104 aa17.03■□□□□ 0.32
FKRP-223ENST00000600872 POLRMTO00411 1230 aaKnown RBP17.03■□□□□ 0.32
FKRP-223ENST00000600872 KCNA3P22001 575 aa17.03■□□□□ 0.32
FKRP-223ENST00000600872 RALBP1Q15311 655 aa17.03■□□□□ 0.32
FKRP-223ENST00000600872 USPL1Q5W0Q7 1092 aa17.03■□□□□ 0.32
FKRP-223ENST00000600872 TGFB2P61812 414 aa17.02■□□□□ 0.32
FKRP-223ENST00000600872 FMNL2Q96PY5 1086 aa17.02■□□□□ 0.32
FKRP-223ENST00000600872 PARP3Q9Y6F1 533 aa17.02■□□□□ 0.32
FKRP-223ENST00000600872 KDM3BQ7LBC6 1761 aa17.02■□□□□ 0.31
FKRP-223ENST00000600872 SCN7AQ01118 1682 aa17.01■□□□□ 0.31
FKRP-223ENST00000600872 PRAMEF22A3QJZ6 481 aa17.01■□□□□ 0.31
FKRP-223ENST00000600872 CANXP27824 592 aaKnown RBP17.01■□□□□ 0.31
FKRP-223ENST00000600872 WWC3Q9ULE0 1092 aa17.01■□□□□ 0.31
FKRP-223ENST00000600872 A0A0G2JLW4 131 aa17■□□□□ 0.31
FKRP-223ENST00000600872 STARD3NLO95772 234 aa17■□□□□ 0.31
FKRP-223ENST00000600872 A1BGP04217 495 aa17■□□□□ 0.31
FKRP-223ENST00000600872 NFIXQ14938 502 aa17■□□□□ 0.31
FKRP-223ENST00000600872 TEX13AQ9BXU3 409 aaPredicted RBP17■□□□□ 0.31
FKRP-223ENST00000600872 USP16Q9Y5T5 823 aa17■□□□□ 0.31
FKRP-223ENST00000600872 ARFGEF1Q9Y6D6 1849 aa17■□□□□ 0.31
FKRP-223ENST00000600872 ZPR1O75312 459 aa16.99■□□□□ 0.31
FKRP-223ENST00000600872 DPEP1P16444 411 aa16.99■□□□□ 0.31
FKRP-223ENST00000600872 RTF1Q92541 710 aaKnown RBP16.99■□□□□ 0.31
FKRP-223ENST00000600872 BCORQ6W2J9 1755 aa16.99■□□□□ 0.31
FKRP-223ENST00000600872 ADCY9O60503 1353 aa16.99■□□□□ 0.31
FKRP-223ENST00000600872 NFE2L2Q16236 605 aa16.98■□□□□ 0.31
FKRP-223ENST00000600872 IL6STP40189 918 aaPredicted RBP16.97■□□□□ 0.31
FKRP-223ENST00000600872 TAF7Q15545 349 aaPredicted RBP16.97■□□□□ 0.31
FKRP-223ENST00000600872 MYBBP1AQ9BQG0 1328 aaKnown RBP16.96■□□□□ 0.31
FKRP-223ENST00000600872 THUMPD2Q9BTF0 503 aaKnown RBP16.96■□□□□ 0.31
FKRP-223ENST00000600872 MIS18AQ9NYP9 233 aa16.96■□□□□ 0.31
FKRP-223ENST00000600872 LAMB4A4D0S4 1761 aa16.96■□□□□ 0.31
FKRP-223ENST00000600872 DLEC1Q9Y238 1755 aa16.96■□□□□ 0.31
FKRP-223ENST00000600872 ANKRD31Q8N7Z5 1873 aa16.96■□□□□ 0.31
FKRP-223ENST00000600872 SNRPA1P09661 255 aaKnown RBP16.95■□□□□ 0.3
FKRP-223ENST00000600872 CARMIL3Q8ND23 1372 aa16.94■□□□□ 0.3
FKRP-223ENST00000600872 NBPF26B4DH59 902 aa16.94■□□□□ 0.3
FKRP-223ENST00000600872 CAMTA2O94983 1202 aa16.94■□□□□ 0.3
FKRP-223ENST00000600872 PIP4K2AP48426 406 aaPredicted RBP16.94■□□□□ 0.3
FKRP-223ENST00000600872 TBC1D9BQ66K14 1250 aa16.94■□□□□ 0.3
FKRP-223ENST00000600872 NBPF10Q6P3W6 841 aaKnown RBP16.94■□□□□ 0.3
FKRP-223ENST00000600872 NBPF15Q8N660 670 aa16.94■□□□□ 0.3
FKRP-223ENST00000600872 TBC1D2BQ9UPU7 963 aa16.94■□□□□ 0.3
FKRP-223ENST00000600872 A0A087WZG4 1122 aa16.93■□□□□ 0.3
FKRP-223ENST00000600872 SERPINB2P05120 415 aa16.93■□□□□ 0.3
FKRP-223ENST00000600872 CHRNA5P30532 468 aa16.93■□□□□ 0.3
FKRP-223ENST00000600872 PRKRIP1Q9H875 184 aaPredicted RBP16.92■□□□□ 0.3
FKRP-223ENST00000600872 BCS1LQ9Y276 419 aa16.92■□□□□ 0.3
FKRP-223ENST00000600872 ATP10DQ9P241 1426 aa16.92■□□□□ 0.3
FKRP-223ENST00000600872 SBF1O95248 1867 aa16.91■□□□□ 0.3
FKRP-223ENST00000600872 EIF4A1P60842 406 aaKnown RBP16.91■□□□□ 0.3
FKRP-223ENST00000600872 PNNQ9H307 717 aaKnown RBP16.91■□□□□ 0.3
FKRP-223ENST00000600872 GIGYF1O75420 1035 aaPredicted RBP16.9■□□□□ 0.3
FKRP-223ENST00000600872 TMPOP42166 694 aaKnown RBP16.9■□□□□ 0.3
FKRP-223ENST00000600872 PIM2Q9P1W9 311 aa16.9■□□□□ 0.3
FKRP-223ENST00000600872 NEFMP07197 916 aa16.89■□□□□ 0.29
FKRP-223ENST00000600872 BICDL1Q6ZP65 573 aa16.89■□□□□ 0.29
FKRP-223ENST00000600872 DZIP3Q86Y13 1208 aaKnown RBP16.89■□□□□ 0.29
FKRP-223ENST00000600872 ZNF330Q9Y3S2 320 aaPredicted RBP16.89■□□□□ 0.29
FKRP-223ENST00000600872 COL11A2P13942 1736 aaPredicted RBP16.89■□□□□ 0.29
FKRP-223ENST00000600872 MAPK8IP3Q9UPT6 1336 aa16.89■□□□□ 0.29
FKRP-223ENST00000600872 RIPK4P57078 832 aa16.88■□□□□ 0.29
FKRP-223ENST00000600872 PNISRQ8TF01 805 aaKnown RBP16.88■□□□□ 0.29
FKRP-223ENST00000600872 PRR5LQ6MZQ0 368 aa16.87■□□□□ 0.29
FKRP-223ENST00000600872 ADAMTS8Q9UP79 889 aa16.87■□□□□ 0.29
FKRP-223ENST00000600872 DALRD3Q5D0E6 543 aaKnown RBP16.86■□□□□ 0.29
FKRP-223ENST00000600872 CLEC4GQ6UXB4 293 aa16.86■□□□□ 0.29
FKRP-223ENST00000600872 CCDC146Q8IYE0 955 aa16.86■□□□□ 0.29
FKRP-223ENST00000600872 TRIM35Q9UPQ4 493 aa16.86■□□□□ 0.29
FKRP-223ENST00000600872 NUP98P52948 1817 aa16.86■□□□□ 0.29
FKRP-223ENST00000600872 RGL2O15211 777 aa16.85■□□□□ 0.29
FKRP-223ENST00000600872 C1QTNF8P60827 252 aa16.85■□□□□ 0.29
FKRP-223ENST00000600872 LRP10Q7Z4F1 713 aa16.85■□□□□ 0.29
FKRP-223ENST00000600872 CCDC24Q8N4L8 307 aa16.85■□□□□ 0.29
FKRP-223ENST00000600872 RRP7AQ9Y3A4 280 aaKnown RBP16.85■□□□□ 0.29
FKRP-223ENST00000600872 HLFQ16534 295 aa16.84■□□□□ 0.29
FKRP-223ENST00000600872 ARHGAP27Q6ZUM4 889 aa16.84■□□□□ 0.29
FKRP-223ENST00000600872 RUNDC1Q96C34 613 aa16.84■□□□□ 0.29
FKRP-223ENST00000600872 PRELPP51888 382 aa16.83■□□□□ 0.28
FKRP-223ENST00000600872 SETDB2Q96T68 719 aa16.83■□□□□ 0.28
FKRP-223ENST00000600872 BRIP1Q9BX63 1249 aa16.83■□□□□ 0.28
FKRP-223ENST00000600872 BABAM1Q9NWV8 329 aa16.83■□□□□ 0.28
FKRP-223ENST00000600872 CCDC88AQ3V6T2 1871 aa16.82■□□□□ 0.28
FKRP-223ENST00000600872 ARFGEF2Q9Y6D5 1785 aa16.82■□□□□ 0.28
FKRP-223ENST00000600872 PDIA6Q15084 440 aa16.82■□□□□ 0.28
FKRP-223ENST00000600872 C2CD5Q86YS7 1000 aa16.82■□□□□ 0.28
FKRP-223ENST00000600872 TSPYL4Q9UJ04 414 aa16.82■□□□□ 0.28
FKRP-223ENST00000600872 SLX4Q8IY92 1834 aa16.82■□□□□ 0.28
FKRP-223ENST00000600872 CHL1O00533 1208 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms