RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 AEBP1Q8IUX7 1158 aa13.95□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 PASKQ96RG2 1323 aa13.94□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 DPEP1P16444 411 aa13.94□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 FXR1P51114 621 aaKnown RBP eCLIP13.94□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 DCAF5Q96JK2 942 aa13.94□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 TIMELESSQ9UNS1 1208 aa13.94□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 PCGF6Q9BYE7 350 aa13.93□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 PANK3Q9H999 370 aa13.93□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 TRIOBPQ9H2D6 2365 aa13.93□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 TMEM88BA6NKF7 163 aa13.92□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 DGKZQ13574 1117 aa13.92□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 TSKSQ9UJT2 592 aa13.92□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 WDR33Q9C0J8 1336 aaKnown RBP13.91□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 RASSF10A6NK89 507 aa13.91□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 MMP10P09238 476 aa13.91□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 ZNF219Q9P2Y4 722 aaPredicted RBP13.91□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 DICER1Q9UPY3 1922 aaKnown RBP13.91□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 CLSPNQ9HAW4 1339 aa13.9□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 POTEIP0CG38 1075 aa13.9□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 POTEJP0CG39 1038 aa13.9□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 BEGAINQ9BUH8 593 aa13.9□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 AFDNP55196 1824 aaKnown RBP13.9□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 ERVV-2B6SEH9 535 aa13.89□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 GYS1P13807 737 aa13.89□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 ZNF530Q6P9A1 599 aaPredicted RBP13.89□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 SLC17A8Q8NDX2 589 aa13.89□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 ARHGEF1Q92888 912 aaKnown RBP13.89□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 RBM42Q9BTD8 480 aaKnown RBP13.89□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 CNTNAP4Q9C0A0 1308 aa13.89□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 UBR2Q8IWV8 1755 aa13.88□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 KCNA3P22001 575 aa13.88□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 RASSF7Q02833 373 aa13.88□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 DEFB115Q30KQ5 88 aa13.88□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 MRC1P22897 1456 aa13.87□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 CEP290O15078 2479 aa13.87□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 EIF4G2P78344 907 aaKnown RBP eCLIP13.87□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 NBPF15Q8N660 670 aa13.87□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 IL13P35225 146 aa13.86□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 PLEKHO1Q53GL0 409 aaPredicted RBP13.86□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 RC3H1Q5TC82 1133 aaKnown RBP13.86□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 SRP68Q9UHB9 627 aaKnown RBP13.86□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 RTCBQ9Y3I0 505 aaKnown RBP13.86□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 NRXN2Q9P2S2 1712 aa13.86□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 DLEC1Q9Y238 1755 aa13.86□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 PTCD1O75127 700 aaKnown RBP13.85□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 RPS6KA4O75676 772 aa13.85□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 DDR1Q08345 913 aa13.85□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 DALRD3Q5D0E6 543 aaKnown RBP13.85□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 TRAPPC3LQ5T215 181 aa13.85□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 SULT6B1Q6IMI4 303 aa13.85□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 PIM2Q9P1W9 311 aa13.85□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 SIPA1L3O60292 1781 aaPredicted RBP13.85□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 HMGB2P26583 209 aaKnown RBP13.84□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 CRKLP46109 303 aaKnown RBP13.84□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 CABP4P57796 275 aa13.84□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 AMER1Q5JTC6 1135 aaPredicted RBP13.84□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 NFATC2IPQ8NCF5 419 aa13.84□□□□□ -0.19
MIA-RAB4B-201ENST00000600729 SCN4AP35499 1836 aa13.83□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 COL3A1P02461 1466 aaPredicted RBP13.83□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 LMNB1P20700 586 aa13.83□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 FKBP8Q14318 412 aa13.83□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 AMOTQ4VCS5 1084 aa13.83□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 MORC1Q86VD1 984 aa13.83□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 UNC80Q8N2C7 3258 aa13.82□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 HSP90AB1P08238 724 aaKnown RBP13.82□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 ADRA2BP18089 450 aa13.82□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 MTHFSP49914 203 aa13.82□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 INTS5Q6P9B9 1019 aaKnown RBP13.82□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 NLGN1Q8N2Q7 840 aa13.82□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 LGR6Q9HBX8 967 aa13.82□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 USP42Q9H9J4 1324 aaKnown RBP13.82□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 ANKRD31Q8N7Z5 1873 aa13.82□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 DNAJC10Q8IXB1 793 aa13.81□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 CCDC87Q9NVE4 849 aa13.81□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 KIF7Q2M1P5 1343 aa13.81□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 ITGBL1O95965 494 aaPredicted RBP13.8□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 RFC4P35249 363 aa13.8□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 ADAMTSL1Q8N6G6 1762 aa13.8□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 COL11A2P13942 1736 aaPredicted RBP13.79□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 TRPM7Q96QT4 1865 aa13.79□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 HMOX1P09601 288 aa13.79□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 SLC39A6Q13433 755 aa13.79□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 C1orf141Q5JVX7 400 aa13.79□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 LDHDQ86WU2 507 aa13.79□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 SCN7AQ01118 1682 aa13.79□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 POLRMTO00411 1230 aaKnown RBP13.78□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 PER1O15534 1290 aaPredicted RBP13.78□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 CHRNA5P30532 468 aa13.78□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 DPY19L2Q6NUT2 758 aa13.78□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 CAPNS2Q96L46 248 aa13.78□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 SLC52A2Q9HAB3 445 aa13.78□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 ABT1Q9ULW3 272 aaKnown RBP13.78□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 SOS1Q07889 1333 aaPredicted RBP13.78□□□□□ -0.2
MIA-RAB4B-201ENST00000600729 RNMTO43148 476 aaKnown RBP13.77□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 CA12O43570 354 aa13.77□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 TM4SF1P30408 202 aa13.77□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 MTHFSDQ2M296 383 aaKnown RBP13.77□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 AKAP4Q5JQC9 854 aa13.77□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 CARMIL3Q8ND23 1372 aa13.77□□□□□ -0.21
MIA-RAB4B-201ENST00000600729 BCL2L12Q9HB09 334 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms