RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 NRKQ7Z2Y5 1582 aa14.08□□□□□ -0.16
ARHGEF1-220ENST00000600274 KIF24Q5T7B8 1368 aa14.08□□□□□ -0.16
ARHGEF1-220ENST00000600274 NPHP4O75161 1426 aaPredicted RBP14.08□□□□□ -0.16
ARHGEF1-220ENST00000600274 CWC27Q6UX04 472 aaKnown RBP14.08□□□□□ -0.16
ARHGEF1-220ENST00000600274 KLHDC4Q8TBB5 520 aa14.08□□□□□ -0.16
ARHGEF1-220ENST00000600274 DBF4Q9UBU7 674 aaPredicted RBP14.08□□□□□ -0.16
ARHGEF1-220ENST00000600274 CHMP3Q9Y3E7 222 aa14.08□□□□□ -0.16
ARHGEF1-220ENST00000600274 SOS1Q07889 1333 aaPredicted RBP14.08□□□□□ -0.16
ARHGEF1-220ENST00000600274 RHPN1Q8TCX5 695 aa14.08□□□□□ -0.16
ARHGEF1-220ENST00000600274 PALD1Q9ULE6 856 aa14.08□□□□□ -0.16
ARHGEF1-220ENST00000600274 AMOTQ4VCS5 1084 aa14.07□□□□□ -0.16
ARHGEF1-220ENST00000600274 C19orf44Q9H6X5 657 aa14.07□□□□□ -0.16
ARHGEF1-220ENST00000600274 DDX11L8A8MPP1 907 aa14.07□□□□□ -0.16
ARHGEF1-220ENST00000600274 GOLGA6L22H0YM25 854 aa14.07□□□□□ -0.16
ARHGEF1-220ENST00000600274 SPG7Q9UQ90 795 aa14.07□□□□□ -0.16
ARHGEF1-220ENST00000600274 TATP17735 454 aaPredicted RBP14.06□□□□□ -0.16
ARHGEF1-220ENST00000600274 MCCP23508 829 aa14.06□□□□□ -0.16
ARHGEF1-220ENST00000600274 DDX49Q9Y6V7 483 aaKnown RBP14.06□□□□□ -0.16
ARHGEF1-220ENST00000600274 TOPAZ1Q8N9V7 1692 aa14.06□□□□□ -0.16
ARHGEF1-220ENST00000600274 TTC5Q8N0Z6 440 aa14.06□□□□□ -0.16
ARHGEF1-220ENST00000600274 TRIM44Q96DX7 344 aaPredicted RBP14.06□□□□□ -0.16
ARHGEF1-220ENST00000600274 STRN4Q9NRL3 753 aa14.06□□□□□ -0.16
ARHGEF1-220ENST00000600274 CCDC8Q9H0W5 538 aaPredicted RBP14.06□□□□□ -0.16
ARHGEF1-220ENST00000600274 ADGRL3Q9HAR2 1447 aa14.06□□□□□ -0.16
ARHGEF1-220ENST00000600274 BEND3Q5T5X7 828 aa14.05□□□□□ -0.16
ARHGEF1-220ENST00000600274 L1TD1Q5T7N2 865 aaKnown RBP14.05□□□□□ -0.16
ARHGEF1-220ENST00000600274 ESYT1Q9BSJ8 1104 aa14.05□□□□□ -0.16
ARHGEF1-220ENST00000600274 ATP5J2-PTCD1G3V325 749 aa14.05□□□□□ -0.16
ARHGEF1-220ENST00000600274 PTCD1O75127 700 aaKnown RBP14.05□□□□□ -0.16
ARHGEF1-220ENST00000600274 GIGYF1O75420 1035 aaPredicted RBP14.05□□□□□ -0.16
ARHGEF1-220ENST00000600274 KCNJ4P48050 445 aa14.05□□□□□ -0.16
ARHGEF1-220ENST00000600274 IFIT2P09913 472 aaKnown RBP14.05□□□□□ -0.16
ARHGEF1-220ENST00000600274 CHMLP26374 656 aa14.04□□□□□ -0.16
ARHGEF1-220ENST00000600274 MYD88Q99836 296 aa14.04□□□□□ -0.16
ARHGEF1-220ENST00000600274 IL25Q9H293 177 aa14.04□□□□□ -0.16
ARHGEF1-220ENST00000600274 KIAA1211Q6ZU35 1233 aa14.04□□□□□ -0.16
ARHGEF1-220ENST00000600274 AACSQ86V21 672 aa14.03□□□□□ -0.16
ARHGEF1-220ENST00000600274 CLASRPQ8N2M8 674 aaKnown RBP14.03□□□□□ -0.16
ARHGEF1-220ENST00000600274 COPS6Q7L5N1 327 aa14.03□□□□□ -0.16
ARHGEF1-220ENST00000600274 XAGE3Q8WTP9 111 aa14.03□□□□□ -0.16
ARHGEF1-220ENST00000600274 KIF1BPQ96EK5 621 aa14.03□□□□□ -0.16
ARHGEF1-220ENST00000600274 TMEM94Q12767 1356 aa14.03□□□□□ -0.16
ARHGEF1-220ENST00000600274 IBTKQ9P2D0 1353 aaPredicted RBP14.03□□□□□ -0.16
ARHGEF1-220ENST00000600274 CPA1P15085 419 aa14.03□□□□□ -0.16
ARHGEF1-220ENST00000600274 RAB3GAP1Q15042 981 aa14.03□□□□□ -0.16
ARHGEF1-220ENST00000600274 DIAPH3Q9NSV4 1193 aa14.03□□□□□ -0.16
ARHGEF1-220ENST00000600274 PXDNQ92626 1479 aa14.03□□□□□ -0.16
ARHGEF1-220ENST00000600274 ZNF496Q96IT1 587 aaPredicted RBP14.02□□□□□ -0.16
ARHGEF1-220ENST00000600274 DDX58O95786 925 aaKnown RBP14.02□□□□□ -0.17
ARHGEF1-220ENST00000600274 TOM1L2Q6ZVM7 507 aa14.02□□□□□ -0.17
ARHGEF1-220ENST00000600274 PRDM11Q9NQV5 511 aa14.02□□□□□ -0.17
ARHGEF1-220ENST00000600274 ERBB3P21860 1342 aa14.02□□□□□ -0.17
ARHGEF1-220ENST00000600274 NEXNQ0ZGT2 675 aa14.02□□□□□ -0.17
ARHGEF1-220ENST00000600274 SSH3Q8TE77 659 aa14.02□□□□□ -0.17
ARHGEF1-220ENST00000600274 USP16Q9Y5T5 823 aa14.02□□□□□ -0.17
ARHGEF1-220ENST00000600274 PRPF40AO75400 957 aaKnown RBP14.01□□□□□ -0.17
ARHGEF1-220ENST00000600274 XRCC6P12956 609 aaKnown RBP eCLIP14.01□□□□□ -0.17
ARHGEF1-220ENST00000600274 G3BP1Q13283 466 aaKnown RBP eCLIP14.01□□□□□ -0.17
ARHGEF1-220ENST00000600274 ZNF790Q6PG37 636 aa14.01□□□□□ -0.17
ARHGEF1-220ENST00000600274 KSR2Q6VAB6 950 aa14.01□□□□□ -0.17
ARHGEF1-220ENST00000600274 CABP4P57796 275 aa14.01□□□□□ -0.17
ARHGEF1-220ENST00000600274 GLIPR1L2Q4G1C9 344 aa14.01□□□□□ -0.17
ARHGEF1-220ENST00000600274 SUCLG2Q96I99 432 aa14.01□□□□□ -0.17
ARHGEF1-220ENST00000600274 BICC1Q9H694 974 aaKnown RBP14.01□□□□□ -0.17
ARHGEF1-220ENST00000600274 RRAGDQ9NQL2 400 aaPredicted RBP14.01□□□□□ -0.17
ARHGEF1-220ENST00000600274 NDUFB9Q9Y6M9 179 aa14.01□□□□□ -0.17
ARHGEF1-220ENST00000600274 BAG4O95429 457 aaKnown RBP14□□□□□ -0.17
ARHGEF1-220ENST00000600274 BOLA2Q9H3K6 86 aa14□□□□□ -0.17
ARHGEF1-220ENST00000600274 CAVIN1Q6NZI2 390 aaKnown RBP14□□□□□ -0.17
ARHGEF1-220ENST00000600274 CNTROBQ8N137 903 aa14□□□□□ -0.17
ARHGEF1-220ENST00000600274 FAM43AQ8N2R8 423 aa14□□□□□ -0.17
ARHGEF1-220ENST00000600274 TMX3Q96JJ7 454 aa14□□□□□ -0.17
ARHGEF1-220ENST00000600274 NALCNQ8IZF0 1738 aa13.99□□□□□ -0.17
ARHGEF1-220ENST00000600274 ADCY9O60503 1353 aa13.99□□□□□ -0.17
ARHGEF1-220ENST00000600274 CEMIPQ8WUJ3 1361 aa13.99□□□□□ -0.17
ARHGEF1-220ENST00000600274 CCDC85AQ96PX6 553 aaPredicted RBP13.99□□□□□ -0.17
ARHGEF1-220ENST00000600274 CIZ1Q9ULV3 898 aaPredicted RBP13.99□□□□□ -0.17
ARHGEF1-220ENST00000600274 ZMYND15Q9H091 742 aa13.99□□□□□ -0.17
ARHGEF1-220ENST00000600274 RGPD1P0DJD0 1748 aa13.99□□□□□ -0.17
ARHGEF1-220ENST00000600274 XRN1Q8IZH2 1706 aaKnown RBP13.99□□□□□ -0.17
ARHGEF1-220ENST00000600274 FMN2Q9NZ56 1722 aa13.99□□□□□ -0.17
ARHGEF1-220ENST00000600274 GRM8O00222 908 aa13.99□□□□□ -0.17
ARHGEF1-220ENST00000600274 UBE3BQ7Z3V4 1068 aa13.99□□□□□ -0.17
ARHGEF1-220ENST00000600274 GDPD2Q9HCC8 539 aa13.99□□□□□ -0.17
ARHGEF1-220ENST00000600274 BABAM1Q9NWV8 329 aa13.98□□□□□ -0.17
ARHGEF1-220ENST00000600274 NWD1Q149M9 1564 aa13.98□□□□□ -0.17
ARHGEF1-220ENST00000600274 OSBPL3Q9H4L5 887 aa13.98□□□□□ -0.17
ARHGEF1-220ENST00000600274 HYPKQ9NX55 129 aa13.98□□□□□ -0.17
ARHGEF1-220ENST00000600274 RAB11FIP3O75154 756 aa13.97□□□□□ -0.17
ARHGEF1-220ENST00000600274 IFNL2Q8IZJ0 200 aa13.97□□□□□ -0.17
ARHGEF1-220ENST00000600274 EDC3Q96F86 508 aaKnown RBP13.97□□□□□ -0.17
ARHGEF1-220ENST00000600274 CHMP4AQ9BY43 222 aa13.97□□□□□ -0.17
ARHGEF1-220ENST00000600274 NPHP3Q7Z494 1330 aa13.97□□□□□ -0.17
ARHGEF1-220ENST00000600274 AK9Q5TCS8 1911 aa13.97□□□□□ -0.17
ARHGEF1-220ENST00000600274 KAT6BQ8WYB5 2073 aa13.97□□□□□ -0.17
ARHGEF1-220ENST00000600274 SLC52A2Q9HAB3 445 aa13.97□□□□□ -0.17
ARHGEF1-220ENST00000600274 TLR7Q9NYK1 1049 aaKnown RBP13.97□□□□□ -0.17
ARHGEF1-220ENST00000600274 RBM27Q9P2N5 1060 aaKnown RBP13.97□□□□□ -0.17
ARHGEF1-220ENST00000600274 PHKG2P15735 406 aa13.97□□□□□ -0.17
ARHGEF1-220ENST00000600274 EVA1CP58658 441 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms