RNA–Protein interactions for RNA: ENST00000600252.5

SYDE1-203, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 2 BASIC

Gene SYDE1, Length 3,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-203ENST00000600252 XAGE3Q8WTP9 111 aa15.54■□□□□ 0.08
SYDE1-203ENST00000600252 MAP3K2Q9Y2U5 619 aa15.54■□□□□ 0.08
SYDE1-203ENST00000600252 DNAAF4Q8WXU2 420 aa15.54■□□□□ 0.08
SYDE1-203ENST00000600252 MAP7D2Q96T17 732 aa15.54■□□□□ 0.08
SYDE1-203ENST00000600252 GNAI2P04899 355 aa15.53■□□□□ 0.08
SYDE1-203ENST00000600252 GPTP24298 496 aa15.53■□□□□ 0.08
SYDE1-203ENST00000600252 ATP6V1AP38606 617 aa15.53■□□□□ 0.08
SYDE1-203ENST00000600252 EIF4A1P60842 406 aaKnown RBP15.53■□□□□ 0.08
SYDE1-203ENST00000600252 QTRT2Q9H974 415 aaKnown RBP15.53■□□□□ 0.08
SYDE1-203ENST00000600252 SURF6O75683 361 aaKnown RBP15.53■□□□□ 0.08
SYDE1-203ENST00000600252 CHD2O14647 1828 aaKnown RBP15.53■□□□□ 0.08
SYDE1-203ENST00000600252 A1BGP04217 495 aa15.52■□□□□ 0.08
SYDE1-203ENST00000600252 USP16Q9Y5T5 823 aa15.52■□□□□ 0.08
SYDE1-203ENST00000600252 SSH2Q76I76 1423 aa15.52■□□□□ 0.08
SYDE1-203ENST00000600252 HYPKQ9NX55 129 aa15.52■□□□□ 0.08
SYDE1-203ENST00000600252 XRN1Q8IZH2 1706 aaKnown RBP15.52■□□□□ 0.07
SYDE1-203ENST00000600252 TRIM6-TRIM34B2RNG4 842 aa15.52■□□□□ 0.07
SYDE1-203ENST00000600252 UNC5CLQ8IV45 518 aa15.52■□□□□ 0.07
SYDE1-203ENST00000600252 SIL1Q9H173 461 aa15.52■□□□□ 0.07
SYDE1-203ENST00000600252 ZNF142P52746 1687 aaPredicted RBP15.52■□□□□ 0.07
SYDE1-203ENST00000600252 TRMT2AQ8IZ69 625 aaKnown RBP15.51■□□□□ 0.07
SYDE1-203ENST00000600252 MEIS3Q99687 375 aa15.51■□□□□ 0.07
SYDE1-203ENST00000600252 ASAP1Q9ULH1 1129 aa15.51■□□□□ 0.07
SYDE1-203ENST00000600252 KNDC1Q76NI1 1749 aa15.51■□□□□ 0.07
SYDE1-203ENST00000600252 KCNQ4P56696 695 aa15.51■□□□□ 0.07
SYDE1-203ENST00000600252 GORABQ5T7V8 394 aa15.5■□□□□ 0.07
SYDE1-203ENST00000600252 CLCN1P35523 988 aa15.5■□□□□ 0.07
SYDE1-203ENST00000600252 DNAJC10Q8IXB1 793 aa15.5■□□□□ 0.07
SYDE1-203ENST00000600252 PDZRN3Q9UPQ7 1066 aa15.5■□□□□ 0.07
SYDE1-203ENST00000600252 NALCNQ8IZF0 1738 aa15.49■□□□□ 0.07
SYDE1-203ENST00000600252 SRGAP3O43295 1099 aa15.49■□□□□ 0.07
SYDE1-203ENST00000600252 PHF14O94880 888 aa15.49■□□□□ 0.07
SYDE1-203ENST00000600252 ANKRD13DQ6ZTN6 518 aa15.49■□□□□ 0.07
SYDE1-203ENST00000600252 TBC1D2BQ9UPU7 963 aa15.49■□□□□ 0.07
SYDE1-203ENST00000600252 EXOC6BQ9Y2D4 811 aa15.49■□□□□ 0.07
SYDE1-203ENST00000600252 PCDHB15Q9Y5E8 787 aa15.49■□□□□ 0.07
SYDE1-203ENST00000600252 AFF2P51816 1311 aa15.49■□□□□ 0.07
SYDE1-203ENST00000600252 CDCA7Q9BWT1 371 aaPredicted RBP15.49■□□□□ 0.07
SYDE1-203ENST00000600252 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.49■□□□□ 0.07
SYDE1-203ENST00000600252 LRRFIP2Q9Y608 721 aaKnown RBP15.49■□□□□ 0.07
SYDE1-203ENST00000600252 ADGRB2O60241 1585 aa15.49■□□□□ 0.07
SYDE1-203ENST00000600252 PTPRCP08575 1304 aa15.49■□□□□ 0.07
SYDE1-203ENST00000600252 JCADQ9P266 1359 aa15.49■□□□□ 0.07
SYDE1-203ENST00000600252 GIGYF1O75420 1035 aaPredicted RBP15.48■□□□□ 0.07
SYDE1-203ENST00000600252 CWF19L2Q2TBE0 894 aaKnown RBP15.48■□□□□ 0.07
SYDE1-203ENST00000600252 KIF20BQ96Q89 1820 aa15.48■□□□□ 0.07
SYDE1-203ENST00000600252 BACH2Q9BYV9 841 aa15.48■□□□□ 0.07
SYDE1-203ENST00000600252 SETD1AO15047 1707 aaKnown RBP15.48■□□□□ 0.07
SYDE1-203ENST00000600252 ZNF853P0CG23 659 aa15.48■□□□□ 0.07
SYDE1-203ENST00000600252 G3BP1Q13283 466 aaKnown RBP eCLIP15.48■□□□□ 0.07
SYDE1-203ENST00000600252 CGNQ9P2M7 1197 aaKnown RBP15.47■□□□□ 0.07
SYDE1-203ENST00000600252 IGHDP01880 384 aa15.47■□□□□ 0.07
SYDE1-203ENST00000600252 A0A087WZG4 1122 aa15.47■□□□□ 0.07
SYDE1-203ENST00000600252 RILPL2Q969X0 211 aa15.47■□□□□ 0.07
SYDE1-203ENST00000600252 SF3B2Q13435 895 aaKnown RBP15.46■□□□□ 0.07
SYDE1-203ENST00000600252 CASC1Q6TDU7 716 aa15.46■□□□□ 0.07
SYDE1-203ENST00000600252 TRPC5Q9UL62 973 aaPredicted RBP15.46■□□□□ 0.07
SYDE1-203ENST00000600252 FMN2Q9NZ56 1722 aa15.46■□□□□ 0.07
SYDE1-203ENST00000600252 UBE3BQ7Z3V4 1068 aa15.46■□□□□ 0.07
SYDE1-203ENST00000600252 IL1RAPL2Q9NP60 686 aa15.46■□□□□ 0.07
SYDE1-203ENST00000600252 PROSER3Q2NL68 480 aa15.46■□□□□ 0.06
SYDE1-203ENST00000600252 ERVV-2B6SEH9 535 aa15.45■□□□□ 0.06
SYDE1-203ENST00000600252 NCBP3Q53F19 620 aaKnown RBP15.45■□□□□ 0.06
SYDE1-203ENST00000600252 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.45■□□□□ 0.06
SYDE1-203ENST00000600252 PANK2Q9BZ23 570 aa15.45■□□□□ 0.06
SYDE1-203ENST00000600252 MFAP1P55081 439 aaKnown RBP15.45■□□□□ 0.06
SYDE1-203ENST00000600252 DDX21Q9NR30 783 aaKnown RBP eCLIP15.45■□□□□ 0.06
SYDE1-203ENST00000600252 KDRP35968 1356 aa15.45■□□□□ 0.06
SYDE1-203ENST00000600252 ARHGAP45Q92619 1136 aa15.45■□□□□ 0.06
SYDE1-203ENST00000600252 USP32Q8NFA0 1604 aa15.44■□□□□ 0.06
SYDE1-203ENST00000600252 PIGBQ92521 554 aa15.44■□□□□ 0.06
SYDE1-203ENST00000600252 NEUROD6Q96NK8 337 aa15.44■□□□□ 0.06
SYDE1-203ENST00000600252 TEX13AQ9BXU3 409 aaPredicted RBP15.44■□□□□ 0.06
SYDE1-203ENST00000600252 SMARCA5O60264 1052 aaPredicted RBP15.44■□□□□ 0.06
SYDE1-203ENST00000600252 KSR2Q6VAB6 950 aa15.43■□□□□ 0.06
SYDE1-203ENST00000600252 COL3A1P02461 1466 aaPredicted RBP15.43■□□□□ 0.06
SYDE1-203ENST00000600252 IFIT2P09913 472 aaKnown RBP15.42■□□□□ 0.06
SYDE1-203ENST00000600252 SEPT12Q8IYM1 358 aa15.42■□□□□ 0.06
SYDE1-203ENST00000600252 BABAM1Q9NWV8 329 aa15.42■□□□□ 0.06
SYDE1-203ENST00000600252 KCNJ4P48050 445 aa15.42■□□□□ 0.06
SYDE1-203ENST00000600252 CRB1P82279 1406 aa15.42■□□□□ 0.06
SYDE1-203ENST00000600252 KCNQ2O43526 872 aa15.42■□□□□ 0.06
SYDE1-203ENST00000600252 CBX1P83916 185 aa15.41■□□□□ 0.06
SYDE1-203ENST00000600252 TRMT112Q9UI30 125 aaKnown RBP15.41■□□□□ 0.06
SYDE1-203ENST00000600252 ZPR1O75312 459 aa15.41■□□□□ 0.06
SYDE1-203ENST00000600252 SMARCC1Q92922 1105 aaPredicted RBP15.41■□□□□ 0.06
SYDE1-203ENST00000600252 MRE11P49959 708 aa15.41■□□□□ 0.06
SYDE1-203ENST00000600252 AK7Q96M32 723 aa15.41■□□□□ 0.06
SYDE1-203ENST00000600252 RPAP2Q8IXW5 612 aaPredicted RBP15.4■□□□□ 0.06
SYDE1-203ENST00000600252 IPO4Q8TEX9 1081 aaKnown RBP15.4■□□□□ 0.06
SYDE1-203ENST00000600252 PATL2C9JE40 543 aaKnown RBP15.4■□□□□ 0.06
SYDE1-203ENST00000600252 CPDO75976 1380 aa15.4■□□□□ 0.06
SYDE1-203ENST00000600252 CCNL1Q9UK58 526 aaPredicted RBP15.4■□□□□ 0.06
SYDE1-203ENST00000600252 UQCRHLA0A096LP55 91 aa15.39■□□□□ 0.05
SYDE1-203ENST00000600252 UQCRHP07919 91 aa15.39■□□□□ 0.05
SYDE1-203ENST00000600252 DZIP3Q86Y13 1208 aaKnown RBP15.39■□□□□ 0.05
SYDE1-203ENST00000600252 GPATCH3Q96I76 525 aa15.39■□□□□ 0.05
SYDE1-203ENST00000600252 GOLGA6L22H0YM25 854 aa15.39■□□□□ 0.05
SYDE1-203ENST00000600252 TPRNQ4KMQ1 711 aa15.39■□□□□ 0.05
SYDE1-203ENST00000600252 TRIM37O94972 964 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms