RNA–Protein interactions for RNA: ENST00000600078.5

RAB4B-206, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 5

Gene RAB4B, Length 715 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-206ENST00000600078 GNPATO15228 680 aa25.21■■□□□ 1.63
RAB4B-206ENST00000600078 HTATSF1O43719 755 aaKnown RBP25.21■■□□□ 1.63
RAB4B-206ENST00000600078 SIK1P57059 783 aa25.21■■□□□ 1.63
RAB4B-206ENST00000600078 FSTL1Q12841 308 aa25.2■■□□□ 1.62
RAB4B-206ENST00000600078 C16orf71Q8IYS4 520 aaPredicted RBP25.2■■□□□ 1.62
RAB4B-206ENST00000600078 PNISRQ8TF01 805 aaKnown RBP25.2■■□□□ 1.62
RAB4B-206ENST00000600078 ASAP1Q9ULH1 1129 aa25.2■■□□□ 1.62
RAB4B-206ENST00000600078 PCNTO95613 3336 aa25.19■■□□□ 1.62
RAB4B-206ENST00000600078 ATG3Q9NT62 314 aa25.19■■□□□ 1.62
RAB4B-206ENST00000600078 MRC1P22897 1456 aa25.19■■□□□ 1.62
RAB4B-206ENST00000600078 C4AP0C0L4 1744 aa25.18■■□□□ 1.62
RAB4B-206ENST00000600078 TNRC6CQ9HCJ0 1690 aaKnown RBP25.18■■□□□ 1.62
RAB4B-206ENST00000600078 ITPK1Q13572 414 aa25.18■■□□□ 1.62
RAB4B-206ENST00000600078 KCPQ6ZWJ8 1503 aa25.17■■□□□ 1.62
RAB4B-206ENST00000600078 TEFQ10587 303 aa25.17■■□□□ 1.62
RAB4B-206ENST00000600078 CEMIPQ8WUJ3 1361 aa25.17■■□□□ 1.62
RAB4B-206ENST00000600078 TMPOP42166 694 aaKnown RBP25.16■■□□□ 1.62
RAB4B-206ENST00000600078 C9orf131Q5VYM1 1079 aa25.16■■□□□ 1.62
RAB4B-206ENST00000600078 MCM10Q7L590 875 aa25.16■■□□□ 1.62
RAB4B-206ENST00000600078 DLG5Q8TDM6 1919 aa25.16■■□□□ 1.62
RAB4B-206ENST00000600078 RIPK4P57078 832 aa25.15■■□□□ 1.62
RAB4B-206ENST00000600078 DPEP1P16444 411 aa25.14■■□□□ 1.62
RAB4B-206ENST00000600078 DCTN1Q14203 1278 aa25.14■■□□□ 1.62
RAB4B-206ENST00000600078 ATP6V1AP38606 617 aa25.12■■□□□ 1.61
RAB4B-206ENST00000600078 RRP7AQ9Y3A4 280 aaKnown RBP25.12■■□□□ 1.61
RAB4B-206ENST00000600078 KDM2BQ8NHM5 1336 aa25.12■■□□□ 1.61
RAB4B-206ENST00000600078 LMOD3Q0VAK6 560 aa25.11■■□□□ 1.61
RAB4B-206ENST00000600078 NEUROD2Q15784 382 aa25.11■■□□□ 1.61
RAB4B-206ENST00000600078 RBM42Q9BTD8 480 aaKnown RBP25.11■■□□□ 1.61
RAB4B-206ENST00000600078 CCDC87Q9NVE4 849 aa25.11■■□□□ 1.61
RAB4B-206ENST00000600078 COL5A3P25940 1745 aaPredicted RBP25.1■■□□□ 1.61
RAB4B-206ENST00000600078 SLC39A6Q13433 755 aa25.1■■□□□ 1.61
RAB4B-206ENST00000600078 NLGN1Q8N2Q7 840 aa25.1■■□□□ 1.61
RAB4B-206ENST00000600078 ZNF831Q5JPB2 1677 aa25.1■■□□□ 1.61
RAB4B-206ENST00000600078 SBF1O95248 1867 aa25.09■■□□□ 1.61
RAB4B-206ENST00000600078 SIPA1L3O60292 1781 aaPredicted RBP25.09■■□□□ 1.61
RAB4B-206ENST00000600078 CCER2I3L3R5 266 aa25.09■■□□□ 1.61
RAB4B-206ENST00000600078 APAF1O14727 1248 aa25.09■■□□□ 1.61
RAB4B-206ENST00000600078 KCNA3P22001 575 aa25.09■■□□□ 1.61
RAB4B-206ENST00000600078 PTCD1O75127 700 aaKnown RBP25.08■■□□□ 1.61
RAB4B-206ENST00000600078 FAM9BQ8IZU0 186 aa25.08■■□□□ 1.61
RAB4B-206ENST00000600078 BTBD11A6QL63 1104 aa25.07■■□□□ 1.6
RAB4B-206ENST00000600078 THUMPD2Q9BTF0 503 aaKnown RBP25.07■■□□□ 1.6
RAB4B-206ENST00000600078 RRAGCQ9HB90 399 aa25.07■■□□□ 1.6
RAB4B-206ENST00000600078 RTCBQ9Y3I0 505 aaKnown RBP25.07■■□□□ 1.6
RAB4B-206ENST00000600078 TAF7Q15545 349 aaPredicted RBP25.06■■□□□ 1.6
RAB4B-206ENST00000600078 TRAPPC3LQ5T215 181 aa25.06■■□□□ 1.6
RAB4B-206ENST00000600078 TTC5Q8N0Z6 440 aa25.06■■□□□ 1.6
RAB4B-206ENST00000600078 RNF181Q9P0P0 153 aa25.06■■□□□ 1.6
RAB4B-206ENST00000600078 GYS1P13807 737 aa25.05■■□□□ 1.6
RAB4B-206ENST00000600078 ZNF790Q6PG37 636 aa25.05■■□□□ 1.6
RAB4B-206ENST00000600078 SMC1BQ8NDV3 1235 aa25.05■■□□□ 1.6
RAB4B-206ENST00000600078 SLC4A9Q96Q91 983 aa25.05■■□□□ 1.6
RAB4B-206ENST00000600078 HSPA1AP0DMV8 641 aaKnown RBP25.04■■□□□ 1.6
RAB4B-206ENST00000600078 HSPA1BP0DMV9 641 aaKnown RBP25.04■■□□□ 1.6
RAB4B-206ENST00000600078 MIER1Q8N108 512 aa25.04■■□□□ 1.6
RAB4B-206ENST00000600078 TRIM35Q9UPQ4 493 aa25.04■■□□□ 1.6
RAB4B-206ENST00000600078 ARHGEF1Q92888 912 aaKnown RBP25.03■■□□□ 1.6
RAB4B-206ENST00000600078 PARP3Q9Y6F1 533 aa25.03■■□□□ 1.6
RAB4B-206ENST00000600078 ADRA2BP18089 450 aa25.02■■□□□ 1.6
RAB4B-206ENST00000600078 PIM2Q9P1W9 311 aa25.02■■□□□ 1.6
RAB4B-206ENST00000600078 MYH14Q7Z406 1995 aaKnown RBP25■■□□□ 1.59
RAB4B-206ENST00000600078 KCNQ3O43525 872 aa25■■□□□ 1.59
RAB4B-206ENST00000600078 DALRD3Q5D0E6 543 aaKnown RBP25■■□□□ 1.59
RAB4B-206ENST00000600078 RC3H1Q5TC82 1133 aaKnown RBP24.99■■□□□ 1.59
RAB4B-206ENST00000600078 UBR2Q8IWV8 1755 aa24.99■■□□□ 1.59
RAB4B-206ENST00000600078 VSIG10Q8N0Z9 540 aa24.99■■□□□ 1.59
RAB4B-206ENST00000600078 ZNF496Q96IT1 587 aaPredicted RBP24.99■■□□□ 1.59
RAB4B-206ENST00000600078 CNTNAP4Q9C0A0 1308 aa24.99■■□□□ 1.59
RAB4B-206ENST00000600078 MIS18AQ9NYP9 233 aa24.99■■□□□ 1.59
RAB4B-206ENST00000600078 RFC4P35249 363 aa24.98■■□□□ 1.59
RAB4B-206ENST00000600078 FMNL2Q96PY5 1086 aa24.98■■□□□ 1.59
RAB4B-206ENST00000600078 RPS6KA4O75676 772 aa24.96■■□□□ 1.59
RAB4B-206ENST00000600078 DNAJC10Q8IXB1 793 aa24.96■■□□□ 1.59
RAB4B-206ENST00000600078 TJP1Q07157 1748 aa24.95■■□□□ 1.59
RAB4B-206ENST00000600078 HEG1Q9ULI3 1381 aa24.95■■□□□ 1.59
RAB4B-206ENST00000600078 BABAM1Q9NWV8 329 aa24.95■■□□□ 1.58
RAB4B-206ENST00000600078 TIAM2Q8IVF5 1701 aa24.95■■□□□ 1.58
RAB4B-206ENST00000600078 NCBP3Q53F19 620 aaKnown RBP24.94■■□□□ 1.58
RAB4B-206ENST00000600078 TSPYL4Q9UJ04 414 aa24.94■■□□□ 1.58
RAB4B-206ENST00000600078 ZC3H4Q9UPT8 1303 aaKnown RBP24.93■■□□□ 1.58
RAB4B-206ENST00000600078 CHRNA5P30532 468 aa24.93■■□□□ 1.58
RAB4B-206ENST00000600078 CALD1Q05682 793 aaKnown RBP24.93■■□□□ 1.58
RAB4B-206ENST00000600078 CCDC27Q2M243 656 aa24.93■■□□□ 1.58
RAB4B-206ENST00000600078 TEX13AQ9BXU3 409 aaPredicted RBP24.93■■□□□ 1.58
RAB4B-206ENST00000600078 KDM3BQ7LBC6 1761 aa24.93■■□□□ 1.58
RAB4B-206ENST00000600078 DDR1Q08345 913 aa24.92■■□□□ 1.58
RAB4B-206ENST00000600078 CYP19A1P11511 503 aaPredicted RBP24.91■■□□□ 1.58
RAB4B-206ENST00000600078 CRKLP46109 303 aaKnown RBP24.91■■□□□ 1.58
RAB4B-206ENST00000600078 RASSF7Q02833 373 aa24.91■■□□□ 1.58
RAB4B-206ENST00000600078 LAS1LQ9Y4W2 734 aaKnown RBP24.91■■□□□ 1.58
RAB4B-206ENST00000600078 CHL1O00533 1208 aa24.9■■□□□ 1.58
RAB4B-206ENST00000600078 SNRPA1P09661 255 aaKnown RBP24.9■■□□□ 1.58
RAB4B-206ENST00000600078 EIF4A1P60842 406 aaKnown RBP24.9■■□□□ 1.58
RAB4B-206ENST00000600078 STARD3NLO95772 234 aa24.89■■□□□ 1.58
RAB4B-206ENST00000600078 FKBP8Q14318 412 aa24.89■■□□□ 1.58
RAB4B-206ENST00000600078 WWC1Q8IX03 1113 aa24.89■■□□□ 1.58
RAB4B-206ENST00000600078 SRP68Q9UHB9 627 aaKnown RBP24.89■■□□□ 1.58
RAB4B-206ENST00000600078 SALL2Q9Y467 1007 aaPredicted RBP24.89■■□□□ 1.58
RAB4B-206ENST00000600078 USP42Q9H9J4 1324 aaKnown RBP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms