RNA–Protein interactions for RNA: ENST00000599389.1

CEACAM1-213, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene CEACAM1, Length 1,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-213ENST00000599389 TMOD3Q9NYL9 352 aa10.06□□□□□ -0.8
CEACAM1-213ENST00000599389 NFKBIEO00221 500 aa10.05□□□□□ -0.8
CEACAM1-213ENST00000599389 POTEIP0CG38 1075 aa10.05□□□□□ -0.8
CEACAM1-213ENST00000599389 POTEJP0CG39 1038 aa10.05□□□□□ -0.8
CEACAM1-213ENST00000599389 VEGFBP49765 207 aa10.05□□□□□ -0.8
CEACAM1-213ENST00000599389 HSP90AB2PQ58FF8 381 aa10.05□□□□□ -0.8
CEACAM1-213ENST00000599389 AIDAQ96BJ3 306 aa10.05□□□□□ -0.8
CEACAM1-213ENST00000599389 ANKRD31Q8N7Z5 1873 aa10.04□□□□□ -0.8
CEACAM1-213ENST00000599389 POLRMTO00411 1230 aaKnown RBP10.04□□□□□ -0.8
CEACAM1-213ENST00000599389 RFC4P35249 363 aa10.04□□□□□ -0.8
CEACAM1-213ENST00000599389 FKBP8Q14318 412 aa10.04□□□□□ -0.8
CEACAM1-213ENST00000599389 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.04□□□□□ -0.8
CEACAM1-213ENST00000599389 COL11A2P13942 1736 aaPredicted RBP10.04□□□□□ -0.8
CEACAM1-213ENST00000599389 LTBP1Q14766 1721 aa10.04□□□□□ -0.8
CEACAM1-213ENST00000599389 ARFGEF2Q9Y6D5 1785 aa10.02□□□□□ -0.81
CEACAM1-213ENST00000599389 PHKG2P15735 406 aa10.02□□□□□ -0.81
CEACAM1-213ENST00000599389 TM4SF1P30408 202 aa10.02□□□□□ -0.81
CEACAM1-213ENST00000599389 SRP68Q9UHB9 627 aaKnown RBP10.02□□□□□ -0.81
CEACAM1-213ENST00000599389 RASSF10A6NK89 507 aa10.01□□□□□ -0.81
CEACAM1-213ENST00000599389 SPG7Q9UQ90 795 aa10.01□□□□□ -0.81
CEACAM1-213ENST00000599389 FYB1O15117 783 aa10□□□□□ -0.81
CEACAM1-213ENST00000599389 ITGBL1O95965 494 aaPredicted RBP10□□□□□ -0.81
CEACAM1-213ENST00000599389 MKI67P46013 3256 aaKnown RBP9.99□□□□□ -0.81
CEACAM1-213ENST00000599389 TMEM88BA6NKF7 163 aa9.99□□□□□ -0.81
CEACAM1-213ENST00000599389 DPY19L2Q6NUT2 758 aa9.99□□□□□ -0.81
CEACAM1-213ENST00000599389 LDHDQ86WU2 507 aa9.99□□□□□ -0.81
CEACAM1-213ENST00000599389 IFNL2Q8IZJ0 200 aa9.99□□□□□ -0.81
CEACAM1-213ENST00000599389 CARMIL3Q8ND23 1372 aa9.98□□□□□ -0.81
CEACAM1-213ENST00000599389 LTBP3Q9NS15 1303 aa9.98□□□□□ -0.81
CEACAM1-213ENST00000599389 CCDC85CA6NKD9 419 aa9.98□□□□□ -0.81
CEACAM1-213ENST00000599389 ERVV-2B6SEH9 535 aa9.98□□□□□ -0.81
CEACAM1-213ENST00000599389 CRKLP46109 303 aaKnown RBP9.98□□□□□ -0.81
CEACAM1-213ENST00000599389 TTLL6Q8N841 843 aa9.98□□□□□ -0.81
CEACAM1-213ENST00000599389 L3MBTL3Q96JM7 780 aaPredicted RBP9.98□□□□□ -0.81
CEACAM1-213ENST00000599389 GGNBP2Q9H3C7 697 aa9.98□□□□□ -0.81
CEACAM1-213ENST00000599389 CACNA1SQ13698 1873 aa9.97□□□□□ -0.81
CEACAM1-213ENST00000599389 MAP2K1Q02750 393 aaPredicted RBP9.97□□□□□ -0.81
CEACAM1-213ENST00000599389 TESK2Q96S53 571 aa9.97□□□□□ -0.81
CEACAM1-213ENST00000599389 RBM42Q9BTD8 480 aaKnown RBP9.97□□□□□ -0.81
CEACAM1-213ENST00000599389 CASP8AP2Q9UKL3 1982 aa9.96□□□□□ -0.81
CEACAM1-213ENST00000599389 SLX4Q8IY92 1834 aa9.96□□□□□ -0.81
CEACAM1-213ENST00000599389 DDNO94850 711 aaPredicted RBP9.96□□□□□ -0.82
CEACAM1-213ENST00000599389 ERFEQ4G0M1 354 aa9.96□□□□□ -0.82
CEACAM1-213ENST00000599389 TAF1DQ9H5J8 278 aaPredicted RBP9.96□□□□□ -0.82
CEACAM1-213ENST00000599389 EMILIN1Q9Y6C2 1016 aa9.96□□□□□ -0.82
CEACAM1-213ENST00000599389 TRPM7Q96QT4 1865 aa9.96□□□□□ -0.82
CEACAM1-213ENST00000599389 SCN7AQ01118 1682 aa9.95□□□□□ -0.82
CEACAM1-213ENST00000599389 WDR33Q9C0J8 1336 aaKnown RBP9.95□□□□□ -0.82
CEACAM1-213ENST00000599389 SCN11AQ9UI33 1791 aa9.95□□□□□ -0.82
CEACAM1-213ENST00000599389 IQCA1LA6NCM1 817 aa9.95□□□□□ -0.82
CEACAM1-213ENST00000599389 NFIXQ14938 502 aa9.95□□□□□ -0.82
CEACAM1-213ENST00000599389 NCBP3Q53F19 620 aaKnown RBP9.95□□□□□ -0.82
CEACAM1-213ENST00000599389 INTS5Q6P9B9 1019 aaKnown RBP9.95□□□□□ -0.82
CEACAM1-213ENST00000599389 EYA1Q99502 592 aa9.95□□□□□ -0.82
CEACAM1-213ENST00000599389 SOS1Q07889 1333 aaPredicted RBP9.94□□□□□ -0.82
CEACAM1-213ENST00000599389 CARD11Q9BXL7 1154 aa9.94□□□□□ -0.82
CEACAM1-213ENST00000599389 BCL2L12Q9HB09 334 aa9.94□□□□□ -0.82
CEACAM1-213ENST00000599389 WASHC2AQ641Q2 1341 aa9.94□□□□□ -0.82
CEACAM1-213ENST00000599389 A0A0C4DFX4 3053 aa9.93□□□□□ -0.82
CEACAM1-213ENST00000599389 DEFB115Q30KQ5 88 aa9.93□□□□□ -0.82
CEACAM1-213ENST00000599389 USPL1Q5W0Q7 1092 aa9.93□□□□□ -0.82
CEACAM1-213ENST00000599389 C2CD5Q86YS7 1000 aa9.93□□□□□ -0.82
CEACAM1-213ENST00000599389 HTTP42858 3142 aa9.92□□□□□ -0.82
CEACAM1-213ENST00000599389 MCOLN1Q9GZU1 580 aa9.92□□□□□ -0.82
CEACAM1-213ENST00000599389 TAOK3Q9H2K8 898 aa9.92□□□□□ -0.82
CEACAM1-213ENST00000599389 NARFQ9UHQ1 456 aa9.92□□□□□ -0.82
CEACAM1-213ENST00000599389 BCORQ6W2J9 1755 aa9.92□□□□□ -0.82
CEACAM1-213ENST00000599389 MRC1P22897 1456 aa9.91□□□□□ -0.82
CEACAM1-213ENST00000599389 COL15A1P39059 1388 aa9.91□□□□□ -0.82
CEACAM1-213ENST00000599389 UBR2Q8IWV8 1755 aa9.91□□□□□ -0.82
CEACAM1-213ENST00000599389 H0YIN7 160 aa9.91□□□□□ -0.82
CEACAM1-213ENST00000599389 SERPINB2P05120 415 aa9.91□□□□□ -0.82
CEACAM1-213ENST00000599389 CUL9Q8IWT3 2517 aa9.91□□□□□ -0.82
CEACAM1-213ENST00000599389 C21orf2O43822 256 aa9.9□□□□□ -0.82
CEACAM1-213ENST00000599389 PTCD1O75127 700 aaKnown RBP9.9□□□□□ -0.82
CEACAM1-213ENST00000599389 ZPR1O75312 459 aa9.9□□□□□ -0.82
CEACAM1-213ENST00000599389 HSP90AB1P08238 724 aaKnown RBP9.9□□□□□ -0.82
CEACAM1-213ENST00000599389 PRPF38BQ5VTL8 546 aaKnown RBP9.9□□□□□ -0.82
CEACAM1-213ENST00000599389 SIN3AQ96ST3 1273 aa9.9□□□□□ -0.82
CEACAM1-213ENST00000599389 SZT2Q5T011 3432 aa9.9□□□□□ -0.82
CEACAM1-213ENST00000599389 CNTROBQ8N137 903 aa9.89□□□□□ -0.83
CEACAM1-213ENST00000599389 CAPNS2Q96L46 248 aa9.89□□□□□ -0.83
CEACAM1-213ENST00000599389 PDZRN3Q9UPQ7 1066 aa9.89□□□□□ -0.83
CEACAM1-213ENST00000599389 ZNF541Q9H0D2 1346 aa9.89□□□□□ -0.83
CEACAM1-213ENST00000599389 CABP4P57796 275 aa9.88□□□□□ -0.83
CEACAM1-213ENST00000599389 MAP1SQ66K74 1059 aaPredicted RBP9.88□□□□□ -0.83
CEACAM1-213ENST00000599389 HACL1Q9UJ83 578 aa9.88□□□□□ -0.83
CEACAM1-213ENST00000599389 BRCA2P51587 3418 aa9.88□□□□□ -0.83
CEACAM1-213ENST00000599389 CENPFP49454 3210 aa9.88□□□□□ -0.83
CEACAM1-213ENST00000599389 SNED1Q8TER0 1413 aa9.88□□□□□ -0.83
CEACAM1-213ENST00000599389 CA12O43570 354 aa9.87□□□□□ -0.83
CEACAM1-213ENST00000599389 CYP19A1P11511 503 aaPredicted RBP9.87□□□□□ -0.83
CEACAM1-213ENST00000599389 EPHX2P34913 555 aa9.87□□□□□ -0.83
CEACAM1-213ENST00000599389 EIF4A2Q14240 407 aaKnown RBP9.87□□□□□ -0.83
CEACAM1-213ENST00000599389 DNAJC10Q8IXB1 793 aa9.87□□□□□ -0.83
CEACAM1-213ENST00000599389 GPR101Q96P66 508 aaPredicted RBP9.87□□□□□ -0.83
CEACAM1-213ENST00000599389 BRIP1Q9BX63 1249 aa9.87□□□□□ -0.83
CEACAM1-213ENST00000599389 DDX21Q9NR30 783 aaKnown RBP eCLIP9.87□□□□□ -0.83
CEACAM1-213ENST00000599389 TSKSQ9UJT2 592 aa9.87□□□□□ -0.83
CEACAM1-213ENST00000599389 ABT1Q9ULW3 272 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms