RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 FAM135BQ49AJ0 1406 aa14.66□□□□□ -0.06
SMG9-207ENST00000598860 SETD1AO15047 1707 aaKnown RBP14.66□□□□□ -0.06
SMG9-207ENST00000598860 MMP16P51512 607 aa14.66□□□□□ -0.06
SMG9-207ENST00000598860 ADGRF5Q8IZF2 1346 aa14.66□□□□□ -0.06
SMG9-207ENST00000598860 DISP3Q9P2K9 1392 aa14.65□□□□□ -0.06
SMG9-207ENST00000598860 RNF223E7ERA6 249 aa14.65□□□□□ -0.06
SMG9-207ENST00000598860 DXOO77932 396 aaKnown RBP14.65□□□□□ -0.06
SMG9-207ENST00000598860 CCDC82Q8N4S0 544 aa14.64□□□□□ -0.07
SMG9-207ENST00000598860 AP1G2O75843 785 aa14.63□□□□□ -0.07
SMG9-207ENST00000598860 DESI1Q6ICB0 168 aa14.63□□□□□ -0.07
SMG9-207ENST00000598860 XRN1Q8IZH2 1706 aaKnown RBP14.63□□□□□ -0.07
SMG9-207ENST00000598860 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.61□□□□□ -0.07
SMG9-207ENST00000598860 SOCS7O14512 581 aa14.61□□□□□ -0.07
SMG9-207ENST00000598860 HELBQ8NG08 1087 aaPredicted RBP14.61□□□□□ -0.07
SMG9-207ENST00000598860 FCF1Q9Y324 198 aaKnown RBP14.61□□□□□ -0.07
SMG9-207ENST00000598860 KNDC1Q76NI1 1749 aa14.61□□□□□ -0.07
SMG9-207ENST00000598860 ANKLE1Q8NAG6 615 aa14.6□□□□□ -0.07
SMG9-207ENST00000598860 GPRASP1Q5JY77 1395 aa14.6□□□□□ -0.07
SMG9-207ENST00000598860 USP17L8P0C7I0 530 aa14.59□□□□□ -0.07
SMG9-207ENST00000598860 NBPF8Q3BBV2 869 aa14.59□□□□□ -0.07
SMG9-207ENST00000598860 STK26Q9P289 416 aa14.59□□□□□ -0.07
SMG9-207ENST00000598860 ROBO1Q9Y6N7 1651 aa14.58□□□□□ -0.07
SMG9-207ENST00000598860 CTDSPL2Q05D32 466 aa14.58□□□□□ -0.08
SMG9-207ENST00000598860 TMEM132EQ6IEE7 984 aa14.58□□□□□ -0.08
SMG9-207ENST00000598860 CCDC24Q8N4L8 307 aa14.58□□□□□ -0.08
SMG9-207ENST00000598860 C14orf93Q9H972 538 aaKnown RBP14.58□□□□□ -0.08
SMG9-207ENST00000598860 GDPD2Q9HCC8 539 aa14.58□□□□□ -0.08
SMG9-207ENST00000598860 ADGRB1O14514 1584 aa14.58□□□□□ -0.08
SMG9-207ENST00000598860 ROCK2O75116 1388 aaKnown RBP14.58□□□□□ -0.08
SMG9-207ENST00000598860 DCCP43146 1447 aa14.58□□□□□ -0.08
SMG9-207ENST00000598860 LYPD8Q6UX82 237 aa14.57□□□□□ -0.08
SMG9-207ENST00000598860 NUDT12Q9BQG2 462 aa14.57□□□□□ -0.08
SMG9-207ENST00000598860 ROBO2Q9HCK4 1378 aa14.57□□□□□ -0.08
SMG9-207ENST00000598860 ARHGEF28Q8N1W1 1705 aaKnown RBP14.56□□□□□ -0.08
SMG9-207ENST00000598860 PER1O15534 1290 aaPredicted RBP14.56□□□□□ -0.08
SMG9-207ENST00000598860 PTPRNQ16849 979 aa14.56□□□□□ -0.08
SMG9-207ENST00000598860 CFAP70Q5T0N1 1121 aa14.56□□□□□ -0.08
SMG9-207ENST00000598860 PTCH1Q13635 1447 aa14.56□□□□□ -0.08
SMG9-207ENST00000598860 ADGRL3Q9HAR2 1447 aa14.56□□□□□ -0.08
SMG9-207ENST00000598860 ASXL1Q8IXJ9 1541 aa14.56□□□□□ -0.08
SMG9-207ENST00000598860 ZNF330Q9Y3S2 320 aaPredicted RBP14.55□□□□□ -0.08
SMG9-207ENST00000598860 LRPPRCP42704 1394 aaKnown RBP14.55□□□□□ -0.08
SMG9-207ENST00000598860 PLA2G2CQ5R387 149 aa14.54□□□□□ -0.08
SMG9-207ENST00000598860 BRINP3Q76B58 766 aa14.54□□□□□ -0.08
SMG9-207ENST00000598860 ABCC11Q96J66 1382 aa14.54□□□□□ -0.08
SMG9-207ENST00000598860 CCNYL3P0C7X3 344 aa14.53□□□□□ -0.08
SMG9-207ENST00000598860 WAPLQ7Z5K2 1190 aa14.53□□□□□ -0.08
SMG9-207ENST00000598860 PRM3Q9NNZ6 103 aa14.53□□□□□ -0.08
SMG9-207ENST00000598860 TBC1D2BQ9UPU7 963 aa14.53□□□□□ -0.08
SMG9-207ENST00000598860 DLC1Q96QB1 1528 aa14.52□□□□□ -0.08
SMG9-207ENST00000598860 MST1RQ04912 1400 aa14.52□□□□□ -0.08
SMG9-207ENST00000598860 EIF3AQ14152 1382 aaKnown RBP14.52□□□□□ -0.08
SMG9-207ENST00000598860 ABL2P42684 1182 aa14.52□□□□□ -0.09
SMG9-207ENST00000598860 SIRT1Q96EB6 747 aa14.52□□□□□ -0.09
SMG9-207ENST00000598860 CARD11Q9BXL7 1154 aa14.52□□□□□ -0.09
SMG9-207ENST00000598860 PHLPP1O60346 1717 aa14.52□□□□□ -0.09
SMG9-207ENST00000598860 YTHDC2Q9H6S0 1430 aaKnown RBP14.51□□□□□ -0.09
SMG9-207ENST00000598860 MED1Q15648 1581 aaPredicted RBP14.51□□□□□ -0.09
SMG9-207ENST00000598860 NALCNQ8IZF0 1738 aa14.5□□□□□ -0.09
SMG9-207ENST00000598860 ILDR2Q71H61 639 aa14.5□□□□□ -0.09
SMG9-207ENST00000598860 WWC1Q8IX03 1113 aa14.5□□□□□ -0.09
SMG9-207ENST00000598860 LRRN4Q8WUT4 740 aa14.5□□□□□ -0.09
SMG9-207ENST00000598860 EVA1BQ9NVM1 165 aa14.5□□□□□ -0.09
SMG9-207ENST00000598860 TECPR2O15040 1411 aa14.49□□□□□ -0.09
SMG9-207ENST00000598860 QRICH2Q9H0J4 1663 aa14.49□□□□□ -0.09
SMG9-207ENST00000598860 CTHP32929 405 aa14.49□□□□□ -0.09
SMG9-207ENST00000598860 NBPF1Q3BBV0 1214 aa14.49□□□□□ -0.09
SMG9-207ENST00000598860 CCDC97Q96F63 343 aaPredicted RBP14.49□□□□□ -0.09
SMG9-207ENST00000598860 GJD4Q96KN9 370 aaPredicted RBP14.49□□□□□ -0.09
SMG9-207ENST00000598860 USP47Q96K76 1375 aa14.48□□□□□ -0.09
SMG9-207ENST00000598860 JCADQ9P266 1359 aa14.48□□□□□ -0.09
SMG9-207ENST00000598860 SERPINA10Q9UK55 444 aa14.48□□□□□ -0.09
SMG9-207ENST00000598860 C1orf167Q5SNV9 1468 aa14.48□□□□□ -0.09
SMG9-207ENST00000598860 EIF4G2P78344 907 aaKnown RBP eCLIP14.47□□□□□ -0.09
SMG9-207ENST00000598860 KCNH2Q12809 1159 aa14.47□□□□□ -0.09
SMG9-207ENST00000598860 PTCRAQ6ISU1 281 aaPredicted RBP14.47□□□□□ -0.09
SMG9-207ENST00000598860 EMID1Q96A84 441 aaPredicted RBP14.47□□□□□ -0.09
SMG9-207ENST00000598860 ORAI2Q96SN7 254 aa14.47□□□□□ -0.09
SMG9-207ENST00000598860 POGKQ9P215 609 aa14.47□□□□□ -0.09
SMG9-207ENST00000598860 MAP10Q9P2G4 905 aa14.47□□□□□ -0.09
SMG9-207ENST00000598860 AHDC1Q5TGY3 1603 aaPredicted RBP14.47□□□□□ -0.09
SMG9-207ENST00000598860 PLEKHH1Q9ULM0 1364 aa14.47□□□□□ -0.09
SMG9-207ENST00000598860 ZBTB24O43167 697 aaPredicted RBP14.46□□□□□ -0.09
SMG9-207ENST00000598860 F12P00748 615 aaPredicted RBP14.46□□□□□ -0.09
SMG9-207ENST00000598860 LIAT1Q6ZQX7 453 aa14.46□□□□□ -0.09
SMG9-207ENST00000598860 LRRC59Q96AG4 307 aaKnown RBP14.46□□□□□ -0.09
SMG9-207ENST00000598860 HMX1Q9NP08 348 aaPredicted RBP14.46□□□□□ -0.09
SMG9-207ENST00000598860 NDUFB9Q9Y6M9 179 aa14.46□□□□□ -0.09
SMG9-207ENST00000598860 COL16A1Q07092 1604 aaPredicted RBP14.45□□□□□ -0.1
SMG9-207ENST00000598860 ESCO1Q5FWF5 840 aa14.45□□□□□ -0.1
SMG9-207ENST00000598860 DDX17Q92841 729 aaKnown RBP14.45□□□□□ -0.1
SMG9-207ENST00000598860 PRAM1Q96QH2 718 aa14.45□□□□□ -0.1
SMG9-207ENST00000598860 PRKD2Q9BZL6 878 aa14.45□□□□□ -0.1
SMG9-207ENST00000598860 TRAK1Q9UPV9 953 aa14.45□□□□□ -0.1
SMG9-207ENST00000598860 SLC19A1P41440 591 aa14.44□□□□□ -0.1
SMG9-207ENST00000598860 SAFB2Q14151 953 aaKnown RBP eCLIP14.44□□□□□ -0.1
SMG9-207ENST00000598860 SBNO2Q9Y2G9 1366 aa14.44□□□□□ -0.1
SMG9-207ENST00000598860 SPATA31A6Q5VVP1 1343 aa14.43□□□□□ -0.1
SMG9-207ENST00000598860 UNC93B1Q9H1C4 597 aa14.42□□□□□ -0.1
SMG9-207ENST00000598860 CDC42BPGQ6DT37 1551 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms