RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 HACL1Q9UJ83 578 aa6.47□□□□□ -1.37
HERC3-213ENST00000598772 HPS5Q9UPZ3 1129 aa6.47□□□□□ -1.37
HERC3-213ENST00000598772 ARFGEF1Q9Y6D6 1849 aa6.47□□□□□ -1.37
HERC3-213ENST00000598772 C4BP0C0L5 1744 aa6.47□□□□□ -1.37
HERC3-213ENST00000598772 DOT1LQ8TEK3 1739 aa6.47□□□□□ -1.37
HERC3-213ENST00000598772 CCDC88AQ3V6T2 1871 aa6.47□□□□□ -1.37
HERC3-213ENST00000598772 C21orf2O43822 256 aa6.46□□□□□ -1.38
HERC3-213ENST00000598772 EPHX2P34913 555 aa6.46□□□□□ -1.38
HERC3-213ENST00000598772 ITPK1Q13572 414 aa6.46□□□□□ -1.38
HERC3-213ENST00000598772 C2CD5Q86YS7 1000 aa6.46□□□□□ -1.38
HERC3-213ENST00000598772 KIAA1551Q9HCM1 1747 aa6.46□□□□□ -1.38
HERC3-213ENST00000598772 TRIOBPQ9H2D6 2365 aa6.46□□□□□ -1.38
HERC3-213ENST00000598772 TTC21BQ7Z4L5 1316 aa6.46□□□□□ -1.38
HERC3-213ENST00000598772 SLIT3O75094 1523 aa6.45□□□□□ -1.38
HERC3-213ENST00000598772 TRAF5O00463 557 aa6.45□□□□□ -1.38
HERC3-213ENST00000598772 TRPA1O75762 1119 aa6.45□□□□□ -1.38
HERC3-213ENST00000598772 MNX1P50219 401 aaPredicted RBP6.45□□□□□ -1.38
HERC3-213ENST00000598772 BRPF1P55201 1214 aaPredicted RBP6.45□□□□□ -1.38
HERC3-213ENST00000598772 FKBP8Q14318 412 aa6.45□□□□□ -1.38
HERC3-213ENST00000598772 CTU1Q7Z7A3 348 aaKnown RBP6.45□□□□□ -1.38
HERC3-213ENST00000598772 PIGBQ92521 554 aa6.45□□□□□ -1.38
HERC3-213ENST00000598772 ZNF408Q9H9D4 720 aa6.45□□□□□ -1.38
HERC3-213ENST00000598772 SRP68Q9UHB9 627 aaKnown RBP6.45□□□□□ -1.38
HERC3-213ENST00000598772 KIF13BQ9NQT8 1826 aa6.45□□□□□ -1.38
HERC3-213ENST00000598772 KDM6AO15550 1401 aaPredicted RBP6.44□□□□□ -1.38
HERC3-213ENST00000598772 H0YIN7 160 aa6.44□□□□□ -1.38
HERC3-213ENST00000598772 DDR1Q08345 913 aa6.44□□□□□ -1.38
HERC3-213ENST00000598772 CST9Q5W186 159 aa6.44□□□□□ -1.38
HERC3-213ENST00000598772 PNMA8AQ86V59 439 aaPredicted RBP6.44□□□□□ -1.38
HERC3-213ENST00000598772 PPARGC1BQ86YN6 1023 aaKnown RBP6.44□□□□□ -1.38
HERC3-213ENST00000598772 SYNE4Q8N205 404 aa6.44□□□□□ -1.38
HERC3-213ENST00000598772 USHBP1Q8N6Y0 703 aa6.44□□□□□ -1.38
HERC3-213ENST00000598772 RAPGEF4Q8WZA2 1011 aa6.44□□□□□ -1.38
HERC3-213ENST00000598772 HDAC9Q9UKV0 1011 aa6.44□□□□□ -1.38
HERC3-213ENST00000598772 BRCA1P38398 1863 aaKnown RBP6.43□□□□□ -1.38
HERC3-213ENST00000598772 UBR3Q6ZT12 1888 aa6.43□□□□□ -1.38
HERC3-213ENST00000598772 CELF2O95319 508 aaKnown RBP6.43□□□□□ -1.38
HERC3-213ENST00000598772 AKAP4Q5JQC9 854 aa6.43□□□□□ -1.38
HERC3-213ENST00000598772 DCAF11Q8TEB1 546 aa6.43□□□□□ -1.38
HERC3-213ENST00000598772 ZIC5Q96T25 663 aa6.43□□□□□ -1.38
HERC3-213ENST00000598772 ASAP1Q9ULH1 1129 aa6.43□□□□□ -1.38
HERC3-213ENST00000598772 TLL2Q9Y6L7 1015 aa6.43□□□□□ -1.38
HERC3-213ENST00000598772 SZT2Q5T011 3432 aa6.43□□□□□ -1.38
HERC3-213ENST00000598772 RNF123Q5XPI4 1314 aa6.43□□□□□ -1.38
HERC3-213ENST00000598772 TAF1LQ8IZX4 1826 aa6.43□□□□□ -1.38
HERC3-213ENST00000598772 C4AP0C0L4 1744 aa6.42□□□□□ -1.38
HERC3-213ENST00000598772 TIAM2Q8IVF5 1701 aa6.42□□□□□ -1.38
HERC3-213ENST00000598772 TATP17735 454 aaPredicted RBP6.42□□□□□ -1.38
HERC3-213ENST00000598772 ZNF692Q9BU19 519 aaPredicted RBP6.42□□□□□ -1.38
HERC3-213ENST00000598772 COL25A1Q9BXS0 654 aaPredicted RBP6.42□□□□□ -1.38
HERC3-213ENST00000598772 TAOK3Q9H2K8 898 aa6.42□□□□□ -1.38
HERC3-213ENST00000598772 METRNQ9UJH8 293 aa6.42□□□□□ -1.38
HERC3-213ENST00000598772 GJA3Q9Y6H8 435 aa6.42□□□□□ -1.38
HERC3-213ENST00000598772 TOGARAM1Q9Y4F4 1720 aa6.42□□□□□ -1.38
HERC3-213ENST00000598772 COL6A3P12111 3177 aa6.41□□□□□ -1.38
HERC3-213ENST00000598772 AMPHP49418 695 aa6.41□□□□□ -1.38
HERC3-213ENST00000598772 MAMSTRQ6ZN01 415 aa6.41□□□□□ -1.38
HERC3-213ENST00000598772 L3MBTL3Q96JM7 780 aaPredicted RBP6.41□□□□□ -1.38
HERC3-213ENST00000598772 TMOD3Q9NYL9 352 aa6.41□□□□□ -1.38
HERC3-213ENST00000598772 FARP1Q9Y4F1 1045 aaPredicted RBP6.41□□□□□ -1.38
HERC3-213ENST00000598772 QRICH2Q9H0J4 1663 aa6.41□□□□□ -1.38
HERC3-213ENST00000598772 LTBP1Q14766 1721 aa6.41□□□□□ -1.38
HERC3-213ENST00000598772 CEP290O15078 2479 aa6.4□□□□□ -1.38
HERC3-213ENST00000598772 POLRMTO00411 1230 aaKnown RBP6.4□□□□□ -1.38
HERC3-213ENST00000598772 ZPR1O75312 459 aa6.4□□□□□ -1.38
HERC3-213ENST00000598772 RPS6KA4O75676 772 aa6.4□□□□□ -1.38
HERC3-213ENST00000598772 LMOD1P29536 600 aaPredicted RBP6.4□□□□□ -1.38
HERC3-213ENST00000598772 NOGQ13253 232 aa6.4□□□□□ -1.38
HERC3-213ENST00000598772 SAPCD2Q86UD0 394 aa6.4□□□□□ -1.38
HERC3-213ENST00000598772 NME9Q86XW9 330 aa6.4□□□□□ -1.38
HERC3-213ENST00000598772 CCDC24Q8N4L8 307 aa6.4□□□□□ -1.38
HERC3-213ENST00000598772 IP6K1Q92551 441 aa6.4□□□□□ -1.38
HERC3-213ENST00000598772 MPHOSPH9Q99550 1183 aa6.4□□□□□ -1.38
HERC3-213ENST00000598772 RNF186Q9NXI6 227 aa6.4□□□□□ -1.38
HERC3-213ENST00000598772 TTC21AQ8NDW8 1320 aa6.4□□□□□ -1.39
HERC3-213ENST00000598772 ZNF541Q9H0D2 1346 aa6.4□□□□□ -1.39
HERC3-213ENST00000598772 H0YGN5 161 aa6.39□□□□□ -1.39
HERC3-213ENST00000598772 COL9A1P20849 921 aa6.39□□□□□ -1.39
HERC3-213ENST00000598772 KIF23Q02241 960 aaPredicted RBP6.39□□□□□ -1.39
HERC3-213ENST00000598772 ADGRB1O14514 1584 aa6.39□□□□□ -1.39
HERC3-213ENST00000598772 POTEFA5A3E0 1075 aa6.38□□□□□ -1.39
HERC3-213ENST00000598772 SERPINB2P05120 415 aa6.38□□□□□ -1.39
HERC3-213ENST00000598772 TM4SF1P30408 202 aa6.38□□□□□ -1.39
HERC3-213ENST00000598772 HUNKP57058 714 aa6.38□□□□□ -1.39
HERC3-213ENST00000598772 PKN2Q16513 984 aaKnown RBP6.38□□□□□ -1.39
HERC3-213ENST00000598772 USPL1Q5W0Q7 1092 aa6.38□□□□□ -1.39
HERC3-213ENST00000598772 PRDM6Q9NQX0 595 aa6.38□□□□□ -1.39
HERC3-213ENST00000598772 ZNF277Q9NRM2 450 aaPredicted RBP6.38□□□□□ -1.39
HERC3-213ENST00000598772 ATG3Q9NT62 314 aa6.38□□□□□ -1.39
HERC3-213ENST00000598772 RAPGEFL1Q9UHV5 662 aa6.38□□□□□ -1.39
HERC3-213ENST00000598772 PCDH11XQ9BZA7 1347 aa6.38□□□□□ -1.39
HERC3-213ENST00000598772 PCDH11YQ9BZA8 1340 aa6.38□□□□□ -1.39
HERC3-213ENST00000598772 KTN1Q86UP2 1357 aaKnown RBP6.38□□□□□ -1.39
HERC3-213ENST00000598772 NFAT5O94916 1531 aa6.38□□□□□ -1.39
HERC3-213ENST00000598772 MEGF6O75095 1541 aa6.37□□□□□ -1.39
HERC3-213ENST00000598772 NPHP1O15259 732 aa6.37□□□□□ -1.39
HERC3-213ENST00000598772 CYP27B1O15528 508 aa6.37□□□□□ -1.39
HERC3-213ENST00000598772 EN2P19622 333 aaPredicted RBP6.37□□□□□ -1.39
HERC3-213ENST00000598772 FBLN1P23142 703 aa6.37□□□□□ -1.39
HERC3-213ENST00000598772 RC3H1Q5TC82 1133 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms