RNA–Protein interactions for RNA: ENST00000598178.1

LTBP4-221, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-221ENST00000598178 RNF181Q9P0P0 153 aa16.8■□□□□ 0.28
LTBP4-221ENST00000598178 MRC1P22897 1456 aa16.79■□□□□ 0.28
LTBP4-221ENST00000598178 VIRMAQ69YN4 1812 aaKnown RBP16.78■□□□□ 0.28
LTBP4-221ENST00000598178 U2SURPO15042 1029 aaKnown RBP16.78■□□□□ 0.28
LTBP4-221ENST00000598178 NFATC2IPQ8NCF5 419 aa16.78■□□□□ 0.28
LTBP4-221ENST00000598178 COL3A1P02461 1466 aaPredicted RBP16.78■□□□□ 0.28
LTBP4-221ENST00000598178 USP42Q9H9J4 1324 aaKnown RBP16.77■□□□□ 0.28
LTBP4-221ENST00000598178 CAPN15O75808 1086 aa16.77■□□□□ 0.28
LTBP4-221ENST00000598178 ADAMTS7Q9UKP4 1686 aa16.77■□□□□ 0.28
LTBP4-221ENST00000598178 PTCD1O75127 700 aaKnown RBP16.76■□□□□ 0.27
LTBP4-221ENST00000598178 SLC52A2Q9HAB3 445 aa16.76■□□□□ 0.27
LTBP4-221ENST00000598178 VEGFAP15692 232 aaPredicted RBP16.75■□□□□ 0.27
LTBP4-221ENST00000598178 DDR1Q08345 913 aa16.75■□□□□ 0.27
LTBP4-221ENST00000598178 FKBP8Q14318 412 aa16.75■□□□□ 0.27
LTBP4-221ENST00000598178 GAS2L2Q8NHY3 880 aa16.75■□□□□ 0.27
LTBP4-221ENST00000598178 NUDCQ9Y266 331 aa16.75■□□□□ 0.27
LTBP4-221ENST00000598178 TJP1Q07157 1748 aa16.75■□□□□ 0.27
LTBP4-221ENST00000598178 DLEC1Q9Y238 1755 aa16.74■□□□□ 0.27
LTBP4-221ENST00000598178 GLTPD2A6NH11 291 aa16.74■□□□□ 0.27
LTBP4-221ENST00000598178 TM4SF1P30408 202 aa16.74■□□□□ 0.27
LTBP4-221ENST00000598178 NRXN2Q9P2S2 1712 aa16.73■□□□□ 0.27
LTBP4-221ENST00000598178 POLRMTO00411 1230 aaKnown RBP16.73■□□□□ 0.27
LTBP4-221ENST00000598178 RNMTO43148 476 aaKnown RBP16.73■□□□□ 0.27
LTBP4-221ENST00000598178 HSPA1AP0DMV8 641 aaKnown RBP16.73■□□□□ 0.27
LTBP4-221ENST00000598178 HSPA1BP0DMV9 641 aaKnown RBP16.73■□□□□ 0.27
LTBP4-221ENST00000598178 LMNB1P20700 586 aa16.73■□□□□ 0.27
LTBP4-221ENST00000598178 CHRNA5P30532 468 aa16.73■□□□□ 0.27
LTBP4-221ENST00000598178 CRKLP46109 303 aaKnown RBP16.73■□□□□ 0.27
LTBP4-221ENST00000598178 MTHFSDQ2M296 383 aaKnown RBP16.73■□□□□ 0.27
LTBP4-221ENST00000598178 CCDC88AQ3V6T2 1871 aa16.72■□□□□ 0.27
LTBP4-221ENST00000598178 SRP68Q9UHB9 627 aaKnown RBP16.72■□□□□ 0.27
LTBP4-221ENST00000598178 AFDNP55196 1824 aaKnown RBP16.72■□□□□ 0.27
LTBP4-221ENST00000598178 TEFQ10587 303 aa16.71■□□□□ 0.27
LTBP4-221ENST00000598178 TTC5Q8N0Z6 440 aa16.71■□□□□ 0.27
LTBP4-221ENST00000598178 TIAM2Q8IVF5 1701 aa16.7■□□□□ 0.26
LTBP4-221ENST00000598178 GNAT3A8MTJ3 354 aa16.7■□□□□ 0.26
LTBP4-221ENST00000598178 INTS5Q6P9B9 1019 aaKnown RBP16.69■□□□□ 0.26
LTBP4-221ENST00000598178 LGR6Q9HBX8 967 aa16.69■□□□□ 0.26
LTBP4-221ENST00000598178 UBR2Q8IWV8 1755 aa16.69■□□□□ 0.26
LTBP4-221ENST00000598178 DICER1Q9UPY3 1922 aaKnown RBP16.68■□□□□ 0.26
LTBP4-221ENST00000598178 ZPR1O75312 459 aa16.67■□□□□ 0.26
LTBP4-221ENST00000598178 PPP2R1AP30153 589 aa16.67■□□□□ 0.26
LTBP4-221ENST00000598178 PRKAR2BP31323 418 aa16.67■□□□□ 0.26
LTBP4-221ENST00000598178 RASSF7Q02833 373 aa16.67■□□□□ 0.26
LTBP4-221ENST00000598178 VSIG10Q8N0Z9 540 aa16.67■□□□□ 0.26
LTBP4-221ENST00000598178 NEFMP07197 916 aa16.66■□□□□ 0.26
LTBP4-221ENST00000598178 U2AF1L5P0DN76 240 aaPredicted RBP16.66■□□□□ 0.26
LTBP4-221ENST00000598178 U2AF1Q01081 240 aaKnown RBP eCLIP16.66■□□□□ 0.26
LTBP4-221ENST00000598178 SIPA1L3O60292 1781 aaPredicted RBP16.65■□□□□ 0.26
LTBP4-221ENST00000598178 POTECB2RU33 542 aa16.65■□□□□ 0.26
LTBP4-221ENST00000598178 SLC39A6Q13433 755 aa16.65■□□□□ 0.26
LTBP4-221ENST00000598178 DNAJC10Q8IXB1 793 aa16.65■□□□□ 0.26
LTBP4-221ENST00000598178 TTLL6Q8N841 843 aa16.65■□□□□ 0.26
LTBP4-221ENST00000598178 RSPH6AQ9H0K4 717 aa16.65■□□□□ 0.26
LTBP4-221ENST00000598178 SOS1Q07889 1333 aaPredicted RBP16.65■□□□□ 0.26
LTBP4-221ENST00000598178 STARD3NLO95772 234 aa16.64■□□□□ 0.25
LTBP4-221ENST00000598178 NFIXQ14938 502 aa16.64■□□□□ 0.25
LTBP4-221ENST00000598178 USPL1Q5W0Q7 1092 aa16.64■□□□□ 0.25
LTBP4-221ENST00000598178 DPY19L2Q6NUT2 758 aa16.64■□□□□ 0.25
LTBP4-221ENST00000598178 RTF1Q92541 710 aaKnown RBP16.64■□□□□ 0.25
LTBP4-221ENST00000598178 CREBZFQ9NS37 354 aa16.64■□□□□ 0.25
LTBP4-221ENST00000598178 NARFQ9UHQ1 456 aa16.64■□□□□ 0.25
LTBP4-221ENST00000598178 COL15A1P39059 1388 aa16.64■□□□□ 0.25
LTBP4-221ENST00000598178 FER1L6Q2WGJ9 1857 aa16.63■□□□□ 0.25
LTBP4-221ENST00000598178 NFKBIEO00221 500 aa16.63■□□□□ 0.25
LTBP4-221ENST00000598178 CYP19A1P11511 503 aaPredicted RBP16.63■□□□□ 0.25
LTBP4-221ENST00000598178 TEX13AQ9BXU3 409 aaPredicted RBP16.63■□□□□ 0.25
LTBP4-221ENST00000598178 CEMIPQ8WUJ3 1361 aa16.62■□□□□ 0.25
LTBP4-221ENST00000598178 H0YIN7 160 aa16.61■□□□□ 0.25
LTBP4-221ENST00000598178 ZNF790Q6PG37 636 aa16.61■□□□□ 0.25
LTBP4-221ENST00000598178 NPM2Q86SE8 214 aaKnown RBP16.61■□□□□ 0.25
LTBP4-221ENST00000598178 PRDM10Q9NQV6 1147 aa16.61■□□□□ 0.25
LTBP4-221ENST00000598178 PDZRN3Q9UPQ7 1066 aa16.61■□□□□ 0.25
LTBP4-221ENST00000598178 ZNF316A6NFI3 1004 aaPredicted RBP16.6■□□□□ 0.25
LTBP4-221ENST00000598178 SERPINB2P05120 415 aa16.6■□□□□ 0.25
LTBP4-221ENST00000598178 IL17REQ8NFR9 667 aa16.6■□□□□ 0.25
LTBP4-221ENST00000598178 FMNL2Q96PY5 1086 aa16.6■□□□□ 0.25
LTBP4-221ENST00000598178 HEG1Q9ULI3 1381 aa16.6■□□□□ 0.25
LTBP4-221ENST00000598178 A0A087WZG4 1122 aa16.59■□□□□ 0.25
LTBP4-221ENST00000598178 BTBD11A6QL63 1104 aa16.59■□□□□ 0.25
LTBP4-221ENST00000598178 CHADLQ6NUI6 762 aa16.59■□□□□ 0.25
LTBP4-221ENST00000598178 C2CD5Q86YS7 1000 aa16.59■□□□□ 0.25
LTBP4-221ENST00000598178 PHACTR3Q96KR7 559 aa16.59■□□□□ 0.25
LTBP4-221ENST00000598178 BCL2L12Q9HB09 334 aa16.59■□□□□ 0.25
LTBP4-221ENST00000598178 ZBTB1Q9Y2K1 713 aa16.59■□□□□ 0.25
LTBP4-221ENST00000598178 ANKRD31Q8N7Z5 1873 aa16.59■□□□□ 0.25
LTBP4-221ENST00000598178 PNNQ9H307 717 aaKnown RBP16.58■□□□□ 0.24
LTBP4-221ENST00000598178 LTBP3Q9NS15 1303 aa16.58■□□□□ 0.24
LTBP4-221ENST00000598178 CNTNAP1P78357 1384 aa16.57■□□□□ 0.24
LTBP4-221ENST00000598178 HTATSF1O43719 755 aaKnown RBP16.57■□□□□ 0.24
LTBP4-221ENST00000598178 CANXP27824 592 aaKnown RBP16.57■□□□□ 0.24
LTBP4-221ENST00000598178 ZNF496Q96IT1 587 aaPredicted RBP16.57■□□□□ 0.24
LTBP4-221ENST00000598178 SCN4AP35499 1836 aa16.56■□□□□ 0.24
LTBP4-221ENST00000598178 SCN7AQ01118 1682 aa16.56■□□□□ 0.24
LTBP4-221ENST00000598178 CARMIL3Q8ND23 1372 aa16.56■□□□□ 0.24
LTBP4-221ENST00000598178 SLC34A2O95436 690 aa16.56■□□□□ 0.24
LTBP4-221ENST00000598178 ERFEQ4G0M1 354 aa16.56■□□□□ 0.24
LTBP4-221ENST00000598178 MAPK8IP3Q9UPT6 1336 aa16.55■□□□□ 0.24
LTBP4-221ENST00000598178 FOXN1O15353 648 aa16.55■□□□□ 0.24
LTBP4-221ENST00000598178 BRIP1Q9BX63 1249 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms