RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 C10orf71Q711Q0 1435 aa20.42■□□□□ 0.86
XRCC1-206ENST00000597811 ZNF790Q6PG37 636 aa20.41■□□□□ 0.86
XRCC1-206ENST00000597811 ZNF784Q8NCA9 323 aaPredicted RBP20.41■□□□□ 0.86
XRCC1-206ENST00000597811 ZBTB1Q9Y2K1 713 aa20.41■□□□□ 0.86
XRCC1-206ENST00000597811 PXDNLA1KZ92 1463 aa20.4■□□□□ 0.86
XRCC1-206ENST00000597811 GRIN3BO60391 1043 aa20.4■□□□□ 0.86
XRCC1-206ENST00000597811 FKBP8Q14318 412 aa20.4■□□□□ 0.86
XRCC1-206ENST00000597811 ZNF496Q96IT1 587 aaPredicted RBP20.4■□□□□ 0.86
XRCC1-206ENST00000597811 WWC3Q9ULE0 1092 aa20.4■□□□□ 0.86
XRCC1-206ENST00000597811 AFDNP55196 1824 aaKnown RBP20.39■□□□□ 0.86
XRCC1-206ENST00000597811 COL15A1P39059 1388 aa20.39■□□□□ 0.85
XRCC1-206ENST00000597811 HEG1Q9ULI3 1381 aa20.39■□□□□ 0.85
XRCC1-206ENST00000597811 MCM10Q7L590 875 aa20.37■□□□□ 0.85
XRCC1-206ENST00000597811 CCDC146Q8IYE0 955 aa20.37■□□□□ 0.85
XRCC1-206ENST00000597811 PARP3Q9Y6F1 533 aa20.37■□□□□ 0.85
XRCC1-206ENST00000597811 BTBD11A6QL63 1104 aa20.36■□□□□ 0.85
XRCC1-206ENST00000597811 KCNQ3O43525 872 aa20.36■□□□□ 0.85
XRCC1-206ENST00000597811 DDR1Q08345 913 aa20.36■□□□□ 0.85
XRCC1-206ENST00000597811 USPL1Q5W0Q7 1092 aa20.36■□□□□ 0.85
XRCC1-206ENST00000597811 PLEKHF1Q96S99 279 aa20.36■□□□□ 0.85
XRCC1-206ENST00000597811 ZPR1O75312 459 aa20.35■□□□□ 0.85
XRCC1-206ENST00000597811 STARD3NLO95772 234 aa20.35■□□□□ 0.85
XRCC1-206ENST00000597811 CANXP27824 592 aaKnown RBP20.35■□□□□ 0.85
XRCC1-206ENST00000597811 DCTN1Q14203 1278 aa20.35■□□□□ 0.85
XRCC1-206ENST00000597811 ADAMTS8Q9UP79 889 aa20.35■□□□□ 0.85
XRCC1-206ENST00000597811 NRXN2Q9P2S2 1712 aa20.35■□□□□ 0.85
XRCC1-206ENST00000597811 SCN7AQ01118 1682 aa20.35■□□□□ 0.85
XRCC1-206ENST00000597811 TGFB2P61812 414 aa20.34■□□□□ 0.85
XRCC1-206ENST00000597811 NFE2L2Q16236 605 aa20.34■□□□□ 0.85
XRCC1-206ENST00000597811 FMNL2Q96PY5 1086 aa20.34■□□□□ 0.85
XRCC1-206ENST00000597811 NARFQ9UHQ1 456 aa20.34■□□□□ 0.85
XRCC1-206ENST00000597811 MRS2Q9HD23 443 aa20.33■□□□□ 0.85
XRCC1-206ENST00000597811 ARFGEF1Q9Y6D6 1849 aa20.32■□□□□ 0.84
XRCC1-206ENST00000597811 KDM3BQ7LBC6 1761 aa20.32■□□□□ 0.84
XRCC1-206ENST00000597811 A0A0G2JLW4 131 aa20.32■□□□□ 0.84
XRCC1-206ENST00000597811 POLRMTO00411 1230 aaKnown RBP20.32■□□□□ 0.84
XRCC1-206ENST00000597811 HTATSF1O43719 755 aaKnown RBP20.32■□□□□ 0.84
XRCC1-206ENST00000597811 TM4SF1P30408 202 aa20.32■□□□□ 0.84
XRCC1-206ENST00000597811 EIF5P55010 431 aaKnown RBP20.32■□□□□ 0.84
XRCC1-206ENST00000597811 NEUROD2Q15784 382 aa20.32■□□□□ 0.84
XRCC1-206ENST00000597811 RUNDC1Q96C34 613 aa20.32■□□□□ 0.84
XRCC1-206ENST00000597811 TEX13AQ9BXU3 409 aaPredicted RBP20.32■□□□□ 0.84
XRCC1-206ENST00000597811 BCL2L12Q9HB09 334 aa20.32■□□□□ 0.84
XRCC1-206ENST00000597811 RIPK4P57078 832 aa20.31■□□□□ 0.84
XRCC1-206ENST00000597811 BCORQ6W2J9 1755 aa20.31■□□□□ 0.84
XRCC1-206ENST00000597811 DPEP1P16444 411 aa20.3■□□□□ 0.84
XRCC1-206ENST00000597811 CCDC184Q52MB2 194 aa20.3■□□□□ 0.84
XRCC1-206ENST00000597811 RRP7AQ9Y3A4 280 aaKnown RBP20.3■□□□□ 0.84
XRCC1-206ENST00000597811 LAMB4A4D0S4 1761 aa20.29■□□□□ 0.84
XRCC1-206ENST00000597811 A1BGP04217 495 aa20.29■□□□□ 0.84
XRCC1-206ENST00000597811 NFIXQ14938 502 aa20.29■□□□□ 0.84
XRCC1-206ENST00000597811 PRAMEF22A3QJZ6 481 aa20.28■□□□□ 0.84
XRCC1-206ENST00000597811 KCNA3P22001 575 aa20.28■□□□□ 0.84
XRCC1-206ENST00000597811 DLEC1Q9Y238 1755 aa20.28■□□□□ 0.84
XRCC1-206ENST00000597811 IL6STP40189 918 aaPredicted RBP20.27■□□□□ 0.84
XRCC1-206ENST00000597811 TMPOP42166 694 aaKnown RBP20.27■□□□□ 0.84
XRCC1-206ENST00000597811 LMOD3Q0VAK6 560 aa20.27■□□□□ 0.84
XRCC1-206ENST00000597811 THUMPD2Q9BTF0 503 aaKnown RBP20.27■□□□□ 0.84
XRCC1-206ENST00000597811 BCS1LQ9Y276 419 aa20.27■□□□□ 0.84
XRCC1-206ENST00000597811 ZNF330Q9Y3S2 320 aaPredicted RBP20.27■□□□□ 0.84
XRCC1-206ENST00000597811 USP16Q9Y5T5 823 aa20.27■□□□□ 0.84
XRCC1-206ENST00000597811 ADCY9O60503 1353 aa20.26■□□□□ 0.83
XRCC1-206ENST00000597811 A0A087WZG4 1122 aa20.26■□□□□ 0.83
XRCC1-206ENST00000597811 TAF7Q15545 349 aaPredicted RBP20.26■□□□□ 0.83
XRCC1-206ENST00000597811 ANKRD31Q8N7Z5 1873 aa20.26■□□□□ 0.83
XRCC1-206ENST00000597811 MIS18AQ9NYP9 233 aa20.25■□□□□ 0.83
XRCC1-206ENST00000597811 TBC1D2BQ9UPU7 963 aa20.25■□□□□ 0.83
XRCC1-206ENST00000597811 ATP10DQ9P241 1426 aa20.25■□□□□ 0.83
XRCC1-206ENST00000597811 SNRPA1P09661 255 aaKnown RBP20.24■□□□□ 0.83
XRCC1-206ENST00000597811 CHRNA5P30532 468 aa20.24■□□□□ 0.83
XRCC1-206ENST00000597811 PIP4K2AP48426 406 aaPredicted RBP20.24■□□□□ 0.83
XRCC1-206ENST00000597811 SERPINB2P05120 415 aa20.23■□□□□ 0.83
XRCC1-206ENST00000597811 CARMIL3Q8ND23 1372 aa20.22■□□□□ 0.83
XRCC1-206ENST00000597811 TBC1D9BQ66K14 1250 aa20.22■□□□□ 0.83
XRCC1-206ENST00000597811 BICDL1Q6ZP65 573 aa20.22■□□□□ 0.83
XRCC1-206ENST00000597811 PNISRQ8TF01 805 aaKnown RBP20.22■□□□□ 0.83
XRCC1-206ENST00000597811 PIM2Q9P1W9 311 aa20.22■□□□□ 0.83
XRCC1-206ENST00000597811 APAF1O14727 1248 aa20.21■□□□□ 0.83
XRCC1-206ENST00000597811 CAMTA2O94983 1202 aa20.21■□□□□ 0.83
XRCC1-206ENST00000597811 SBF1O95248 1867 aa20.2■□□□□ 0.82
XRCC1-206ENST00000597811 COL11A2P13942 1736 aaPredicted RBP20.2■□□□□ 0.82
XRCC1-206ENST00000597811 NPM2Q86SE8 214 aaKnown RBP20.2■□□□□ 0.82
XRCC1-206ENST00000597811 FAM9BQ8IZU0 186 aa20.2■□□□□ 0.82
XRCC1-206ENST00000597811 LAS1LQ9Y4W2 734 aaKnown RBP20.2■□□□□ 0.82
XRCC1-206ENST00000597811 SENP3-EIF4A1A0A087X0R7 540 aa20.19■□□□□ 0.82
XRCC1-206ENST00000597811 DZIP3Q86Y13 1208 aaKnown RBP20.19■□□□□ 0.82
XRCC1-206ENST00000597811 NBPF26B4DH59 902 aa20.18■□□□□ 0.82
XRCC1-206ENST00000597811 DALRD3Q5D0E6 543 aaKnown RBP20.18■□□□□ 0.82
XRCC1-206ENST00000597811 NBPF10Q6P3W6 841 aaKnown RBP20.18■□□□□ 0.82
XRCC1-206ENST00000597811 ARHGAP27Q6ZUM4 889 aa20.18■□□□□ 0.82
XRCC1-206ENST00000597811 NBPF15Q8N660 670 aa20.18■□□□□ 0.82
XRCC1-206ENST00000597811 TSPYL4Q9UJ04 414 aa20.18■□□□□ 0.82
XRCC1-206ENST00000597811 GIGYF1O75420 1035 aaPredicted RBP20.17■□□□□ 0.82
XRCC1-206ENST00000597811 CACNA1SQ13698 1873 aa20.17■□□□□ 0.82
XRCC1-206ENST00000597811 EIF4A1P60842 406 aaKnown RBP20.16■□□□□ 0.82
XRCC1-206ENST00000597811 NUP98P52948 1817 aa20.16■□□□□ 0.82
XRCC1-206ENST00000597811 C1QTNF8P60827 252 aa20.15■□□□□ 0.82
XRCC1-206ENST00000597811 PRR5LQ6MZQ0 368 aa20.15■□□□□ 0.82
XRCC1-206ENST00000597811 ZNF526Q8TF50 670 aaPredicted RBP20.15■□□□□ 0.82
XRCC1-206ENST00000597811 TRIM35Q9UPQ4 493 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms