RNA–Protein interactions for RNA: ENST00000597151.1

LTBP4-217, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 285 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-217ENST00000597151 U2AF1Q01081 240 aaKnown RBP eCLIP20.46■□□□□ 0.87
LTBP4-217ENST00000597151 ZNF526Q8TF50 670 aaPredicted RBP20.46■□□□□ 0.87
LTBP4-217ENST00000597151 N4BP2Q86UW6 1770 aaPredicted RBP20.46■□□□□ 0.87
LTBP4-217ENST00000597151 KIAA1551Q9HCM1 1747 aa20.45■□□□□ 0.86
LTBP4-217ENST00000597151 SENP3-EIF4A1A0A087X0R7 540 aa20.45■□□□□ 0.86
LTBP4-217ENST00000597151 POLRMTO00411 1230 aaKnown RBP20.45■□□□□ 0.86
LTBP4-217ENST00000597151 FCHSD2O94868 740 aa20.45■□□□□ 0.86
LTBP4-217ENST00000597151 ZNF790Q6PG37 636 aa20.45■□□□□ 0.86
LTBP4-217ENST00000597151 ZNF496Q96IT1 587 aaPredicted RBP20.45■□□□□ 0.86
LTBP4-217ENST00000597151 GPBP1L1Q9HC44 474 aaPredicted RBP20.45■□□□□ 0.86
LTBP4-217ENST00000597151 NARFQ9UHQ1 456 aa20.45■□□□□ 0.86
LTBP4-217ENST00000597151 ADCY9O60503 1353 aa20.45■□□□□ 0.86
LTBP4-217ENST00000597151 COL15A1P39059 1388 aa20.45■□□□□ 0.86
LTBP4-217ENST00000597151 KCNA3P22001 575 aa20.44■□□□□ 0.86
LTBP4-217ENST00000597151 ARHGAP27Q6ZUM4 889 aa20.44■□□□□ 0.86
LTBP4-217ENST00000597151 NFIXQ14938 502 aa20.42■□□□□ 0.86
LTBP4-217ENST00000597151 TEX13AQ9BXU3 409 aaPredicted RBP20.42■□□□□ 0.86
LTBP4-217ENST00000597151 PIM2Q9P1W9 311 aa20.42■□□□□ 0.86
LTBP4-217ENST00000597151 HEG1Q9ULI3 1381 aa20.42■□□□□ 0.86
LTBP4-217ENST00000597151 UBR2Q8IWV8 1755 aa20.41■□□□□ 0.86
LTBP4-217ENST00000597151 BTBD11A6QL63 1104 aa20.41■□□□□ 0.86
LTBP4-217ENST00000597151 CHRNA5P30532 468 aa20.41■□□□□ 0.86
LTBP4-217ENST00000597151 FMNL2Q96PY5 1086 aa20.41■□□□□ 0.86
LTBP4-217ENST00000597151 BCL2L12Q9HB09 334 aa20.41■□□□□ 0.86
LTBP4-217ENST00000597151 CEMIPQ8WUJ3 1361 aa20.41■□□□□ 0.86
LTBP4-217ENST00000597151 KCNQ3O43525 872 aa20.4■□□□□ 0.86
LTBP4-217ENST00000597151 EIF5P55010 431 aaKnown RBP20.4■□□□□ 0.86
LTBP4-217ENST00000597151 DALRD3Q5D0E6 543 aaKnown RBP20.4■□□□□ 0.86
LTBP4-217ENST00000597151 A0A087WZG4 1122 aa20.39■□□□□ 0.85
LTBP4-217ENST00000597151 RTF1Q92541 710 aaKnown RBP20.39■□□□□ 0.85
LTBP4-217ENST00000597151 SERPINB2P05120 415 aa20.38■□□□□ 0.85
LTBP4-217ENST00000597151 MCM10Q7L590 875 aa20.38■□□□□ 0.85
LTBP4-217ENST00000597151 ZNF330Q9Y3S2 320 aaPredicted RBP20.38■□□□□ 0.85
LTBP4-217ENST00000597151 BICDL1Q6ZP65 573 aa20.37■□□□□ 0.85
LTBP4-217ENST00000597151 SIPA1L3O60292 1781 aaPredicted RBP20.36■□□□□ 0.85
LTBP4-217ENST00000597151 A1BGP04217 495 aa20.36■□□□□ 0.85
LTBP4-217ENST00000597151 TBC1D2BQ9UPU7 963 aa20.36■□□□□ 0.85
LTBP4-217ENST00000597151 IL6STP40189 918 aaPredicted RBP20.35■□□□□ 0.85
LTBP4-217ENST00000597151 DCTN1Q14203 1278 aa20.35■□□□□ 0.85
LTBP4-217ENST00000597151 BRCA1P38398 1863 aaKnown RBP20.34■□□□□ 0.85
LTBP4-217ENST00000597151 HTATSF1O43719 755 aaKnown RBP20.33■□□□□ 0.85
LTBP4-217ENST00000597151 C9orf131Q5VYM1 1079 aa20.33■□□□□ 0.85
LTBP4-217ENST00000597151 TBC1D9BQ66K14 1250 aa20.33■□□□□ 0.85
LTBP4-217ENST00000597151 NPM2Q86SE8 214 aaKnown RBP20.33■□□□□ 0.85
LTBP4-217ENST00000597151 USP16Q9Y5T5 823 aa20.32■□□□□ 0.84
LTBP4-217ENST00000597151 PRAMEF22A3QJZ6 481 aa20.31■□□□□ 0.84
LTBP4-217ENST00000597151 NEFMP07197 916 aa20.31■□□□□ 0.84
LTBP4-217ENST00000597151 C2CD5Q86YS7 1000 aa20.31■□□□□ 0.84
LTBP4-217ENST00000597151 KIF3CO14782 793 aa20.3■□□□□ 0.84
LTBP4-217ENST00000597151 SNRPA1P09661 255 aaKnown RBP20.3■□□□□ 0.84
LTBP4-217ENST00000597151 PIP4K2AP48426 406 aaPredicted RBP20.3■□□□□ 0.84
LTBP4-217ENST00000597151 AFDNP55196 1824 aaKnown RBP20.3■□□□□ 0.84
LTBP4-217ENST00000597151 H0YIN7 160 aa20.29■□□□□ 0.84
LTBP4-217ENST00000597151 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
LTBP4-217ENST00000597151 CARMIL3Q8ND23 1372 aa20.29■□□□□ 0.84
LTBP4-217ENST00000597151 ARFGEF1Q9Y6D6 1849 aa20.29■□□□□ 0.84
LTBP4-217ENST00000597151 NRXN2Q9P2S2 1712 aa20.28■□□□□ 0.84
LTBP4-217ENST00000597151 CAMTA2O94983 1202 aa20.28■□□□□ 0.84
LTBP4-217ENST00000597151 DZIP3Q86Y13 1208 aaKnown RBP20.28■□□□□ 0.84
LTBP4-217ENST00000597151 MIS18AQ9NYP9 233 aa20.28■□□□□ 0.84
LTBP4-217ENST00000597151 RNF181Q9P0P0 153 aa20.28■□□□□ 0.84
LTBP4-217ENST00000597151 CCDC24Q8N4L8 307 aa20.27■□□□□ 0.84
LTBP4-217ENST00000597151 TTLL6Q8N841 843 aa20.27■□□□□ 0.84
LTBP4-217ENST00000597151 SETDB2Q96T68 719 aa20.27■□□□□ 0.84
LTBP4-217ENST00000597151 PRR5LQ6MZQ0 368 aa20.26■□□□□ 0.83
LTBP4-217ENST00000597151 PLEKHF1Q96S99 279 aa20.26■□□□□ 0.83
LTBP4-217ENST00000597151 BRIP1Q9BX63 1249 aa20.25■□□□□ 0.83
LTBP4-217ENST00000597151 NMRK2Q9NPI5 230 aa20.25■□□□□ 0.83
LTBP4-217ENST00000597151 SCN7AQ01118 1682 aa20.25■□□□□ 0.83
LTBP4-217ENST00000597151 NPHP1O15259 732 aa20.24■□□□□ 0.83
LTBP4-217ENST00000597151 PDE6BP35913 854 aa20.24■□□□□ 0.83
LTBP4-217ENST00000597151 ZNF622Q969S3 477 aaKnown RBP eCLIP20.24■□□□□ 0.83
LTBP4-217ENST00000597151 NBPF26B4DH59 902 aa20.23■□□□□ 0.83
LTBP4-217ENST00000597151 HSPA6P17066 643 aa20.23■□□□□ 0.83
LTBP4-217ENST00000597151 RASSF7Q02833 373 aa20.23■□□□□ 0.83
LTBP4-217ENST00000597151 NFE2L2Q16236 605 aa20.23■□□□□ 0.83
LTBP4-217ENST00000597151 NBPF10Q6P3W6 841 aaKnown RBP20.23■□□□□ 0.83
LTBP4-217ENST00000597151 NBPF15Q8N660 670 aa20.23■□□□□ 0.83
LTBP4-217ENST00000597151 CNBD1Q8NA66 436 aa20.23■□□□□ 0.83
LTBP4-217ENST00000597151 PNNQ9H307 717 aaKnown RBP20.23■□□□□ 0.83
LTBP4-217ENST00000597151 PNISRQ8TF01 805 aaKnown RBP20.22■□□□□ 0.83
LTBP4-217ENST00000597151 THUMPD2Q9BTF0 503 aaKnown RBP20.22■□□□□ 0.83
LTBP4-217ENST00000597151 PDZRN3Q9UPQ7 1066 aa20.22■□□□□ 0.83
LTBP4-217ENST00000597151 MAPK8IP3Q9UPT6 1336 aa20.22■□□□□ 0.83
LTBP4-217ENST00000597151 ST5P78524 1137 aa20.21■□□□□ 0.83
LTBP4-217ENST00000597151 RALBP1Q15311 655 aa20.21■□□□□ 0.83
LTBP4-217ENST00000597151 ZNF652Q9Y2D9 606 aa20.21■□□□□ 0.83
LTBP4-217ENST00000597151 TOMM70O94826 608 aa20.2■□□□□ 0.82
LTBP4-217ENST00000597151 LMNB1P20700 586 aa20.2■□□□□ 0.82
LTBP4-217ENST00000597151 DDX10Q13206 875 aaKnown RBP20.2■□□□□ 0.82
LTBP4-217ENST00000597151 CLEC4GQ6UXB4 293 aa20.2■□□□□ 0.82
LTBP4-217ENST00000597151 KDM2BQ8NHM5 1336 aa20.2■□□□□ 0.82
LTBP4-217ENST00000597151 DLEC1Q9Y238 1755 aa20.19■□□□□ 0.82
LTBP4-217ENST00000597151 PRELPP51888 382 aa20.19■□□□□ 0.82
LTBP4-217ENST00000597151 NBPF5PQ86XG9 351 aaPredicted RBP20.19■□□□□ 0.82
LTBP4-217ENST00000597151 ZNF219Q9P2Y4 722 aaPredicted RBP20.19■□□□□ 0.82
LTBP4-217ENST00000597151 C21orf2O43822 256 aa20.18■□□□□ 0.82
LTBP4-217ENST00000597151 CEP350Q5VT06 3117 aa20.18■□□□□ 0.82
LTBP4-217ENST00000597151 NFKBIEO00221 500 aa20.17■□□□□ 0.82
LTBP4-217ENST00000597151 EIF4A1P60842 406 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms