RNA–Protein interactions for RNA: ENST00000596828.1

LINC01440-203, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5 BASIC

Gene LINC01440, Length 1,005 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-203ENST00000596828 C19orf67A6NJJ6 358 aa13.25□□□□□ -0.29
LINC01440-203ENST00000596828 BBXQ8WY36 941 aaPredicted RBP13.25□□□□□ -0.29
LINC01440-203ENST00000596828 PHACTR3Q96KR7 559 aa13.25□□□□□ -0.29
LINC01440-203ENST00000596828 SSFA2P28290 1259 aa13.24□□□□□ -0.29
LINC01440-203ENST00000596828 PELP1Q8IZL8 1130 aaKnown RBP13.24□□□□□ -0.29
LINC01440-203ENST00000596828 RSPH6AQ9H0K4 717 aa13.24□□□□□ -0.29
LINC01440-203ENST00000596828 TAOK2Q9UL54 1235 aa13.24□□□□□ -0.29
LINC01440-203ENST00000596828 MRC1P22897 1456 aa13.23□□□□□ -0.29
LINC01440-203ENST00000596828 CHD4Q14839 1912 aa13.23□□□□□ -0.29
LINC01440-203ENST00000596828 MAP3K5Q99683 1374 aa13.23□□□□□ -0.29
LINC01440-203ENST00000596828 UBR2Q8IWV8 1755 aa13.23□□□□□ -0.29
LINC01440-203ENST00000596828 GNAT3A8MTJ3 354 aa13.23□□□□□ -0.29
LINC01440-203ENST00000596828 NLGN2Q8NFZ4 835 aa13.23□□□□□ -0.29
LINC01440-203ENST00000596828 GAS2L2Q8NHY3 880 aa13.23□□□□□ -0.29
LINC01440-203ENST00000596828 SPOCK2Q92563 424 aa13.23□□□□□ -0.29
LINC01440-203ENST00000596828 CREBZFQ9NS37 354 aa13.23□□□□□ -0.29
LINC01440-203ENST00000596828 RTCBQ9Y3I0 505 aaKnown RBP13.23□□□□□ -0.29
LINC01440-203ENST00000596828 TRAPPC3LQ5T215 181 aa13.22□□□□□ -0.29
LINC01440-203ENST00000596828 PRKCSHP14314 528 aaPredicted RBP13.21□□□□□ -0.29
LINC01440-203ENST00000596828 CRKLP46109 303 aaKnown RBP13.21□□□□□ -0.29
LINC01440-203ENST00000596828 TEFQ10587 303 aa13.21□□□□□ -0.29
LINC01440-203ENST00000596828 DNAJC10Q8IXB1 793 aa13.21□□□□□ -0.29
LINC01440-203ENST00000596828 IL17REQ8NFR9 667 aa13.21□□□□□ -0.29
LINC01440-203ENST00000596828 CICQ96RK0 1608 aaPredicted RBP13.21□□□□□ -0.3
LINC01440-203ENST00000596828 CNTNAP4Q9C0A0 1308 aa13.2□□□□□ -0.3
LINC01440-203ENST00000596828 KCPQ6ZWJ8 1503 aa13.2□□□□□ -0.3
LINC01440-203ENST00000596828 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
LINC01440-203ENST00000596828 GPR162Q16538 588 aa13.2□□□□□ -0.3
LINC01440-203ENST00000596828 ARHGEF1Q92888 912 aaKnown RBP13.2□□□□□ -0.3
LINC01440-203ENST00000596828 RPS6KA4O75676 772 aa13.19□□□□□ -0.3
LINC01440-203ENST00000596828 ECM2O94769 699 aaPredicted RBP13.19□□□□□ -0.3
LINC01440-203ENST00000596828 YY1P25490 414 aa13.19□□□□□ -0.3
LINC01440-203ENST00000596828 RFC4P35249 363 aa13.19□□□□□ -0.3
LINC01440-203ENST00000596828 RC3H1Q5TC82 1133 aaKnown RBP13.19□□□□□ -0.3
LINC01440-203ENST00000596828 TTC5Q8N0Z6 440 aa13.19□□□□□ -0.3
LINC01440-203ENST00000596828 N4BP2Q86UW6 1770 aaPredicted RBP13.18□□□□□ -0.3
LINC01440-203ENST00000596828 FCHSD2O94868 740 aa13.18□□□□□ -0.3
LINC01440-203ENST00000596828 MCM10Q7L590 875 aa13.18□□□□□ -0.3
LINC01440-203ENST00000596828 WWC3Q9ULE0 1092 aa13.18□□□□□ -0.3
LINC01440-203ENST00000596828 MMP10P09238 476 aa13.17□□□□□ -0.3
LINC01440-203ENST00000596828 DCTN1Q14203 1278 aa13.17□□□□□ -0.3
LINC01440-203ENST00000596828 INTS5Q6P9B9 1019 aaKnown RBP13.17□□□□□ -0.3
LINC01440-203ENST00000596828 RTF1Q92541 710 aaKnown RBP13.17□□□□□ -0.3
LINC01440-203ENST00000596828 CCDC87Q9NVE4 849 aa13.17□□□□□ -0.3
LINC01440-203ENST00000596828 SRP68Q9UHB9 627 aaKnown RBP13.17□□□□□ -0.3
LINC01440-203ENST00000596828 NEFMP07197 916 aa13.16□□□□□ -0.3
LINC01440-203ENST00000596828 RALBP1Q15311 655 aa13.16□□□□□ -0.3
LINC01440-203ENST00000596828 BTBD11A6QL63 1104 aa13.15□□□□□ -0.3
LINC01440-203ENST00000596828 KCNQ3O43525 872 aa13.15□□□□□ -0.3
LINC01440-203ENST00000596828 CYP19A1P11511 503 aaPredicted RBP13.15□□□□□ -0.3
LINC01440-203ENST00000596828 GYS1P13807 737 aa13.15□□□□□ -0.3
LINC01440-203ENST00000596828 CANXP27824 592 aaKnown RBP13.15□□□□□ -0.3
LINC01440-203ENST00000596828 ZNF790Q6PG37 636 aa13.15□□□□□ -0.3
LINC01440-203ENST00000596828 ZNF496Q96IT1 587 aaPredicted RBP13.15□□□□□ -0.3
LINC01440-203ENST00000596828 ZBTB47Q9UFB7 747 aaPredicted RBP13.15□□□□□ -0.3
LINC01440-203ENST00000596828 KIF13BQ9NQT8 1826 aa13.14□□□□□ -0.31
LINC01440-203ENST00000596828 PAXIP1Q6ZW49 1069 aaPredicted RBP13.14□□□□□ -0.31
LINC01440-203ENST00000596828 NLGN1Q8N2Q7 840 aa13.14□□□□□ -0.31
LINC01440-203ENST00000596828 ZBTB1Q9Y2K1 713 aa13.14□□□□□ -0.31
LINC01440-203ENST00000596828 ZNF330Q9Y3S2 320 aaPredicted RBP13.14□□□□□ -0.31
LINC01440-203ENST00000596828 CD2APQ9Y5K6 639 aa13.14□□□□□ -0.31
LINC01440-203ENST00000596828 CEMIPQ8WUJ3 1361 aa13.14□□□□□ -0.31
LINC01440-203ENST00000596828 AFDNP55196 1824 aaKnown RBP13.13□□□□□ -0.31
LINC01440-203ENST00000596828 YBX3P16989 372 aaKnown RBP eCLIP13.13□□□□□ -0.31
LINC01440-203ENST00000596828 PARP3Q9Y6F1 533 aa13.13□□□□□ -0.31
LINC01440-203ENST00000596828 MAPK8IP3Q9UPT6 1336 aa13.13□□□□□ -0.31
LINC01440-203ENST00000596828 HEG1Q9ULI3 1381 aa13.12□□□□□ -0.31
LINC01440-203ENST00000596828 ZPR1O75312 459 aa13.12□□□□□ -0.31
LINC01440-203ENST00000596828 ZEB1P37275 1124 aaPredicted RBP13.12□□□□□ -0.31
LINC01440-203ENST00000596828 USPL1Q5W0Q7 1092 aa13.12□□□□□ -0.31
LINC01440-203ENST00000596828 FMNL2Q96PY5 1086 aa13.12□□□□□ -0.31
LINC01440-203ENST00000596828 MIS18AQ9NYP9 233 aa13.12□□□□□ -0.31
LINC01440-203ENST00000596828 KIAA1551Q9HCM1 1747 aa13.12□□□□□ -0.31
LINC01440-203ENST00000596828 GOLGB1Q14789 3259 aaKnown RBP13.12□□□□□ -0.31
LINC01440-203ENST00000596828 SOS1Q07889 1333 aaPredicted RBP13.12□□□□□ -0.31
LINC01440-203ENST00000596828 MYBBP1AQ9BQG0 1328 aaKnown RBP13.12□□□□□ -0.31
LINC01440-203ENST00000596828 USP42Q9H9J4 1324 aaKnown RBP13.12□□□□□ -0.31
LINC01440-203ENST00000596828 COL15A1P39059 1388 aa13.11□□□□□ -0.31
LINC01440-203ENST00000596828 STARD3NLO95772 234 aa13.11□□□□□ -0.31
LINC01440-203ENST00000596828 CFAP44Q96MT7 982 aa13.11□□□□□ -0.31
LINC01440-203ENST00000596828 PLEKHF1Q96S99 279 aa13.11□□□□□ -0.31
LINC01440-203ENST00000596828 THUMPD2Q9BTF0 503 aaKnown RBP13.11□□□□□ -0.31
LINC01440-203ENST00000596828 KDM3BQ7LBC6 1761 aa13.1□□□□□ -0.31
LINC01440-203ENST00000596828 PRAMEF22A3QJZ6 481 aa13.1□□□□□ -0.31
LINC01440-203ENST00000596828 PIP4K2AP48426 406 aaPredicted RBP13.1□□□□□ -0.31
LINC01440-203ENST00000596828 CCDC146Q8IYE0 955 aa13.1□□□□□ -0.31
LINC01440-203ENST00000596828 UTRNP46939 3433 aa13.1□□□□□ -0.31
LINC01440-203ENST00000596828 HTATSF1O43719 755 aaKnown RBP13.09□□□□□ -0.31
LINC01440-203ENST00000596828 A1BGP04217 495 aa13.09□□□□□ -0.31
LINC01440-203ENST00000596828 NFE2L2Q16236 605 aa13.09□□□□□ -0.31
LINC01440-203ENST00000596828 PNNQ9H307 717 aaKnown RBP13.09□□□□□ -0.31
LINC01440-203ENST00000596828 BRCA1P38398 1863 aaKnown RBP13.08□□□□□ -0.32
LINC01440-203ENST00000596828 LAMB4A4D0S4 1761 aa13.08□□□□□ -0.32
LINC01440-203ENST00000596828 A0A0G2JLW4 131 aa13.08□□□□□ -0.32
LINC01440-203ENST00000596828 DDR1Q08345 913 aa13.08□□□□□ -0.32
LINC01440-203ENST00000596828 TAF7Q15545 349 aaPredicted RBP13.08□□□□□ -0.32
LINC01440-203ENST00000596828 BICDL1Q6ZP65 573 aa13.08□□□□□ -0.32
LINC01440-203ENST00000596828 TEX13AQ9BXU3 409 aaPredicted RBP13.08□□□□□ -0.32
LINC01440-203ENST00000596828 NARFQ9UHQ1 456 aa13.08□□□□□ -0.32
LINC01440-203ENST00000596828 USP16Q9Y5T5 823 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms